GR398135
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR398135 vs. TrEMBL
Match: B9RCT2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692080 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.362e-11 Identity = 41/80 (51.25%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 243 GGGAHALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 GGG ALKRIP IKFP RH KSSGS S++H S LQPKRTPV+N+EIEA+LLGGC Sbjct: 3 GGGLQALKRIPLIKFPQRHLKSSGSASKSHES---AVGNGNLPFFSSSKASMTVGGKASLQPKRTPVSNDEIEAILLGGC 79
BLAST of GR398135 vs. TrEMBL
Match: C6TBY3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.211e-9 Identity = 40/81 (49.38%), Postives = 43/81 (53.09%), Query Frame = 3 Query: 246 GGAHALKRIPRIKFPNRHHKS-SGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485 G A+KRIPRIKFP RH K SGST ET S LQPKRTPV+ EEIEA+LLGGCF Sbjct: 2 GAGQAMKRIPRIKFPQRHPKPFSGSTPETQASSSTTDVSLAFFSSSNASTSVGGKAS--LQPKRTPVSKEEIEAILLGGCF 80
BLAST of GR398135 vs. TrEMBL
Match: B9GXI7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646753 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.888e-9 Identity = 40/80 (50.00%), Postives = 45/80 (56.25%), Query Frame = 3 Query: 246 GGAHALKRIPRIKFPNRHH-KSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 GGA ALKRIPRIKFP RH KSSG+ S+ + LQPKRTPV+NEEIEA+LLGGC Sbjct: 2 GGAQALKRIPRIKFPQRHSTKSSGNGSQPEEA--LTSGSAYQAFFSSLKASTAVGGKASLQPKRTPVSNEEIEAILLGGC 79
BLAST of GR398135 vs. TrEMBL
Match: D7TVF9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019535001 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 8.403e-9 Identity = 37/83 (44.58%), Postives = 41/83 (49.40%), Query Frame = 3 Query: 246 GGAHALKRIPRIKFPNRHHKSSGSTSETHV---SPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485 G A+KRIP IKFP RH K SGS S + LQPKRTPV+NEEIEA+LLGGCF Sbjct: 2 GATQAMKRIPLIKFPQRHRKPSGSASASQAVSADGNAQQSSFTRMKVPVAPSNVGSGGKASLQPKRTPVSNEEIEAILLGGCF 84
BLAST of GR398135 vs. TrEMBL
Match: C6T270_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 4.170e-8 Identity = 37/80 (46.25%), Postives = 40/80 (50.00%), Query Frame = 3 Query: 246 GGAHALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485 G ALKRIPRI+FP RH K SGS E S LQPKRTPV+ EEIEA+LLGG F Sbjct: 2 GAGQALKRIPRIEFPQRHPKPSGSAPEIQAS--SSTTDASLAFFKSSNASSSVGGKASLQPKRTPVSKEEIEAILLGGSF 79
BLAST of GR398135 vs. TrEMBL
Match: D7M903_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914208 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 4.611e-7 Identity = 34/76 (44.74%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 H LKRIPRIKFP RH S S +T V+ QPKRTPV+NEE+EA+LLGGC Sbjct: 5 HGLKRIPRIKFPQRHVNPSVSEGKTQVANEADTLFFSNLNIQKTIGGKASS-----QPKRTPVSNEEMEAILLGGC 75
BLAST of GR398135 vs. TrEMBL
Match: Q8LC23_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 6.022e-7 Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 H LKRIPRIKFP RH S S ++ V+ QPKRTPV+NEE+EA+LLGGC Sbjct: 5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTIGGKASS----QPKRTPVSNEEMEAILLGGC 76
BLAST of GR398135 vs. TrEMBL
Match: Q2HIQ5_ARATH (At4g23885 OS=Arabidopsis thaliana GN=At4g23885 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 6.022e-7 Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 H LKRIPRIKFP RH S S ++ V+ QPKRTPV+NEE+EA+LLGGC Sbjct: 5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTTGGKASS----QPKRTPVSNEEMEAILLGGC 76
BLAST of GR398135 vs. TAIR peptide
Match: AT4G23885.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:12419472-12420240 FORWARD LENGTH=77) HSP 1 Score: 58.5362 bits (140), Expect = 4.083e-9 Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3 Query: 255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 H LKRIPRIKFP RH S S ++ V+ QPKRTPV+NEE+EA+LLGGC Sbjct: 5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTTGGKASS----QPKRTPVSNEEMEAILLGGC 76
BLAST of GR398135 vs. TAIR peptide
Match: AT5G24165.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:8188622-8189087 FORWARD LENGTH=75) HSP 1 Score: 53.1434 bits (126), Expect = 1.716e-7 Identity = 29/74 (39.19%), Postives = 37/74 (50.00%), Query Frame = 3 Query: 261 LKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482 ++RIPRIKFP RH SSGS LQPKRTPV+++EIE+++LGGC Sbjct: 1 MRRIPRIKFPQRHSISSGSGPAPGSVSGVKKNVTASSDVPAAPKNTADGGKASLQPKRTPVSDKEIESIMLGGC 74 The following BLAST results are available for this feature:
BLAST of GR398135 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 8
BLAST of GR398135 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR398135 ID=GR398135; Name=GR398135; organism=Cicer arietinum; type=EST; length=710bpback to top |