GR398135

EST Overview
NameGR398135
Unique NameGR398135
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length710
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR398135 vs. TrEMBL
Match: B9RCT2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692080 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.362e-11
Identity = 41/80 (51.25%), Postives = 46/80 (57.50%), Query Frame = 3
Query:  243 GGGAHALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            GGG  ALKRIP IKFP RH KSSGS S++H S                           LQPKRTPV+N+EIEA+LLGGC
Sbjct:    3 GGGLQALKRIPLIKFPQRHLKSSGSASKSHES---AVGNGNLPFFSSSKASMTVGGKASLQPKRTPVSNDEIEAILLGGC 79          
BLAST of GR398135 vs. TrEMBL
Match: C6TBY3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.211e-9
Identity = 40/81 (49.38%), Postives = 43/81 (53.09%), Query Frame = 3
Query:  246 GGAHALKRIPRIKFPNRHHKS-SGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485
            G   A+KRIPRIKFP RH K  SGST ET  S                           LQPKRTPV+ EEIEA+LLGGCF
Sbjct:    2 GAGQAMKRIPRIKFPQRHPKPFSGSTPETQASSSTTDVSLAFFSSSNASTSVGGKAS--LQPKRTPVSKEEIEAILLGGCF 80          
BLAST of GR398135 vs. TrEMBL
Match: B9GXI7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646753 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.888e-9
Identity = 40/80 (50.00%), Postives = 45/80 (56.25%), Query Frame = 3
Query:  246 GGAHALKRIPRIKFPNRHH-KSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            GGA ALKRIPRIKFP RH  KSSG+ S+   +                           LQPKRTPV+NEEIEA+LLGGC
Sbjct:    2 GGAQALKRIPRIKFPQRHSTKSSGNGSQPEEA--LTSGSAYQAFFSSLKASTAVGGKASLQPKRTPVSNEEIEAILLGGC 79          
BLAST of GR398135 vs. TrEMBL
Match: D7TVF9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019535001 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.403e-9
Identity = 37/83 (44.58%), Postives = 41/83 (49.40%), Query Frame = 3
Query:  246 GGAHALKRIPRIKFPNRHHKSSGSTSETHV---SPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485
            G   A+KRIP IKFP RH K SGS S +                                 LQPKRTPV+NEEIEA+LLGGCF
Sbjct:    2 GATQAMKRIPLIKFPQRHRKPSGSASASQAVSADGNAQQSSFTRMKVPVAPSNVGSGGKASLQPKRTPVSNEEIEAILLGGCF 84          
BLAST of GR398135 vs. TrEMBL
Match: C6T270_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.170e-8
Identity = 37/80 (46.25%), Postives = 40/80 (50.00%), Query Frame = 3
Query:  246 GGAHALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGCF 485
            G   ALKRIPRI+FP RH K SGS  E   S                           LQPKRTPV+ EEIEA+LLGG F
Sbjct:    2 GAGQALKRIPRIEFPQRHPKPSGSAPEIQAS--SSTTDASLAFFKSSNASSSVGGKASLQPKRTPVSKEEIEAILLGGSF 79          
BLAST of GR398135 vs. TrEMBL
Match: D7M903_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914208 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.611e-7
Identity = 34/76 (44.74%), Postives = 39/76 (51.32%), Query Frame = 3
Query:  255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            H LKRIPRIKFP RH   S S  +T V+                            QPKRTPV+NEE+EA+LLGGC
Sbjct:    5 HGLKRIPRIKFPQRHVNPSVSEGKTQVANEADTLFFSNLNIQKTIGGKASS-----QPKRTPVSNEEMEAILLGGC 75          
BLAST of GR398135 vs. TrEMBL
Match: Q8LC23_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.022e-7
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3
Query:  255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            H LKRIPRIKFP RH   S S  ++ V+                            QPKRTPV+NEE+EA+LLGGC
Sbjct:    5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTIGGKASS----QPKRTPVSNEEMEAILLGGC 76          
BLAST of GR398135 vs. TrEMBL
Match: Q2HIQ5_ARATH (At4g23885 OS=Arabidopsis thaliana GN=At4g23885 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.022e-7
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3
Query:  255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            H LKRIPRIKFP RH   S S  ++ V+                            QPKRTPV+NEE+EA+LLGGC
Sbjct:    5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTTGGKASS----QPKRTPVSNEEMEAILLGGC 76          
BLAST of GR398135 vs. TAIR peptide
Match: AT4G23885.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24165.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:12419472-12420240 FORWARD LENGTH=77)

HSP 1 Score: 58.5362 bits (140), Expect = 4.083e-9
Identity = 33/76 (43.42%), Postives = 39/76 (51.32%), Query Frame = 3
Query:  255 HALKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            H LKRIPRIKFP RH   S S  ++ V+                            QPKRTPV+NEE+EA+LLGGC
Sbjct:    5 HGLKRIPRIKFPQRHINPSASEGKSQVANEADTLFFSNLNNIQKTTGGKASS----QPKRTPVSNEEMEAILLGGC 76          
BLAST of GR398135 vs. TAIR peptide
Match: AT5G24165.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23885.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:8188622-8189087 FORWARD LENGTH=75)

HSP 1 Score: 53.1434 bits (126), Expect = 1.716e-7
Identity = 29/74 (39.19%), Postives = 37/74 (50.00%), Query Frame = 3
Query:  261 LKRIPRIKFPNRHHKSSGSTSETHVSPXXXXXXXXXXXXXXXXXXXXXXXXXXLQPKRTPVTNEEIEAVLLGGC 482
            ++RIPRIKFP RH  SSGS                                  LQPKRTPV+++EIE+++LGGC
Sbjct:    1 MRRIPRIKFPQRHSISSGSGPAPGSVSGVKKNVTASSDVPAAPKNTADGGKASLQPKRTPVSDKEIESIMLGGC 74          
The following BLAST results are available for this feature:
BLAST of GR398135 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9RCT2_RICCO2.362e-1151.25Putative uncharacterized protein OS=Ricinus commun... [more]
C6TBY3_SOYBN2.211e-949.38Putative uncharacterized protein OS=Glycine max PE... [more]
B9GXI7_POPTR2.888e-950.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TVF9_VITVI8.403e-944.58Whole genome shotgun sequence of line PN40024, sca... [more]
C6T270_SOYBN4.170e-846.25Putative uncharacterized protein OS=Glycine max PE... [more]
D7M903_ARALY4.611e-744.74Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8LC23_ARATH6.022e-743.42Putative uncharacterized protein OS=Arabidopsis th... [more]
Q2HIQ5_ARATH6.022e-743.42At4g23885 OS=Arabidopsis thaliana GN=At4g23885 PE=... [more]
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BLAST of GR398135 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G23885.14.083e-943.42| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT5G24165.11.716e-739.19| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..52
score: NAcoord: 61..75
score
NoneNo IPR availableSEGsegsegcoord: 7..23
score: NAcoord: 58..83
score
NoneNo IPR availableSEGsegsegcoord: 12..29
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR398135 ID=GR398135; Name=GR398135; organism=Cicer arietinum; type=EST; length=710bp
GGTCCGCGTATCTCTCTTTTCCATCCGCGTATCTCTCCATTTTGCTTACA
AGTTACAACATTCCTCTCTCCCTCCTCCAGAATCAGATTCACAACGACAA
ACGCGGCCGCCTCTGCCAGACTACGAATCGCTCTTCTGCTCGCTGAGGGT
CTGCGGCCGCCTTTGCCTGACTGCCTCCGTGGCGGTGGCTATTCGTCGCT
CTTGCCTCTCTGTTCACCACTCTATTTTTTTCAACAACGATGGGTGGAGG
TGCTCACGCTTTGAAGAGAATCCCTCGCATCAAGTTCCCCAACAGGCACC
ATAAATCCTCTGGTTCTACCTCTGAGACTCATGTTTCGCCGTCAACAAGC
GGTGGTAGTTTATCATTCTTTTCAAGTTCAAAAGCTTCAACAACGACTAC
ATTAGGAGGAAAGGCCTCTCTTCAGCCCAAAAGAACTCCAGTGACCAACG
AAGAGATTGAAGCAGTTTTGTTGGGTGGCTGCTTCTAATCGATTGTTCTG
AAAACAAACTACATGAATAATTTTTCTGCGGCTCTGATTCATCAAAGTTC
ACCTACGGGTCCTTTTTCATTTTGTTACTTGGGTGTTACTATGTTTTAAA
CAAATTATTGATTTGATTGTCTGTCAATAATGCAATCCAATCAGGATTGA
AATTGGAGACTATATTATCTACCAATTTAATCGTTACTTCTCTTATTAAC
CAATTTATCG
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