GR407710

EST Overview
NameGR407710
Unique NameGR407710
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length480
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR407710 vs. TrEMBL
Match: B9IKU5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779012 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.971e-20
Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = -1
Query:  184 DEETCCSDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGG 444
            D +T  SDAES     D +E C++   E VT RIH LEL+AY CTL   YA GPLSWE+E LLTNLRISLNISNDEHL  ++NL+S G
Sbjct:  305 DADTLSSDAESFYGHGDKEENCSLPLGEDVTVRIHSLELHAYRCTLGVFYASGPLSWEQEALLTNLRISLNISNDEHLMELRNLISAG 392          
BLAST of GR407710 vs. TrEMBL
Match: B9HA19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763466 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.735e-20
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = -1
Query:  190 DEETCCSDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 444
            D +T  SDAES     D +E C+   +E VT R+ RLEL+AY CTL A YA GPLSWE+E LLTNLRISLNISNDEHL  ++NL+S
Sbjct:  304 DADTLSSDAESFYGHGDGEENCSFPLEEDVTARVRRLELHAYRCTLGAFYASGPLSWEQEALLTNLRISLNISNDEHLMELRNLIS 389          
BLAST of GR407710 vs. TrEMBL
Match: B9SEM1_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0220570 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.718e-19
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = -1
Query:  190 SDAESLDVEDVDEGCTIFP-KEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 426
            SDAES      +EG   FP  E +   +HRLEL+AY CT+EA+YA GP SWE+EE++TNLR+SL+ISNDEHL  ++NLVS
Sbjct:  296 SDAESFCHRGYEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQEEMVTNLRLSLHISNDEHLMEVRNLVS 375          
BLAST of GR407710 vs. TrEMBL
Match: D7SUQ3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035806001 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.757e-14
Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = -1
Query:  175 EVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGGQNF 366
            ++ T  IH LEL+AY  TL A++A GPLSWE+  +LTNLR SL+ISNDEHL  +KNL+S G NF
Sbjct:  321 DLCTASIHSLELHAYRRTLAALHASGPLSWEQSTMLTNLRCSLHISNDEHLMELKNLISAGINF 384          
BLAST of GR407710 vs. TrEMBL
Match: Q6F393_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBb0021G19.5 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.368e-13
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -1
Query:  190 CESDEETCCSDAESLDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453
            C S  E   + A + D +D DE   I         +H LEL AY  T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL  ++ L+S
Sbjct:  217 CTSGMEDDDAAAAAADEDDDDEPAAI--------AVHELELEAYQSTMRALYASGPLTWEQESLLTNLRLSLNISNEEHLLQLRRLLS 296          
BLAST of GR407710 vs. TrEMBL
Match: A2XMW9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13894 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.368e-13
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -1
Query:  190 CESDEETCCSDAESLDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453
            C S  E   + A + D +D DE   I         +H LEL AY  T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL  ++ L+S
Sbjct:  736 CTSGMEDDDAAAAAADEDDDDEPAAI--------AVHELELEAYQSTMRALYASGPLTWEQESLLTNLRLSLNISNEEHLLQLRRLLS 815          
BLAST of GR407710 vs. TrEMBL
Match: B9S4Q9_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0991190 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.048e-13
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = -1
Query:  190 CESDEETCC---------SDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453
            C+     CC         SDAES       V+   T + ++ +   IH LE  AY  T+ A+YA GPLSWE+E LLTNLR+SL+IS++EHL  +K+L+S
Sbjct:  284 CDFPSHNCCKALEAISDNSDAESSSFPCSSVNISSTPYFEQKLEANIHELEFQAYKSTVRALYASGPLSWEQESLLTNLRLSLHISDEEHLLQLKHLLS 382          
BLAST of GR407710 vs. TrEMBL
Match: C5WX75_SORBI (Putative uncharacterized protein Sb01g005220 OS=Sorghum bicolor GN=Sb01g005220 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.402e-12
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = -1
Query:  190 KEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 369
            +E     +H LEL AY  T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL  ++ L+S
Sbjct:  247 EEEAAAGVHGLELEAYRSTMRALYASGPLTWEQEALLTNLRLSLNISNEEHLLQLRRLLS 306          
BLAST of GR407710 vs. TrEMBL
Match: Q6ZLC3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1014_E09.10 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.749e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = -1
Query:  190 IHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 348
            +H LEL AY  T+ A YA GPL+WE+E LLTNLR+SLNI+N+EHL  +++L+S
Sbjct:  309 VHELELQAYQSTVRAFYALGPLTWEQESLLTNLRLSLNITNEEHLLQLRHLLS 361          
BLAST of GR407710 vs. TrEMBL
Match: B9H8E9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559616 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.749e-12
Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = -1
Query:  190 SDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 426
            SDAES  V     +  T + ++ +   IH LE +AY  T++A+YA GPLSWE+E LLTNLR+SL+IS++EHL  ++ L+S
Sbjct:  296 SDAESSFVSFSFIKRLTPYFEQKLEAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSLHISDEEHLLHLRQLLS 375          
BLAST of GR407710 vs. TAIR peptide
Match: AT5G20030.1 (| Symbols: | Plant Tudor-like RNA-binding protein | chr5:6764971-6766036 REVERSE LENGTH=326)

HSP 1 Score: 68.5514 bits (166), Expect = 1.961e-12
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = -1
Query:  190 TCCSDAESL--------------DVEDVDEGCTIFPKEVVTKR------IHRLELNAYHCTLEAMYAFGPL-SWEKEELLTNLRISLNISNDEHLTGIKNLVS 435
            +CC D + L              D E    G     K VV ++      +HRLEL+AY  ++E ++A GP+ +WE+E  +TNLR+ LNISN+EHL  I+NL+S
Sbjct:  216 SCCMDTDGLSAVSFNPIETGNSSDTESSSCGYGKVKKLVVPRKGSEAADVHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIRNLIS 318          
BLAST of GR407710 vs. TAIR peptide
Match: AT4G32440.1 (| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15658692 FORWARD LENGTH=377)

HSP 1 Score: 66.2402 bits (160), Expect = 9.733e-12
Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = -1
Query:  184 AGVCESDEETCCSDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGG 462
            A  C SD E+ C   E        V +G          +   R EL +Y  TL  +++ GPLSWE+E  LT+LR+SLNIS+DEHL  ++NL+S G
Sbjct:  286 ADSCSSDAESSCGLGEEPRWKHSSVGDGA---------RNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSLNISDDEHLMEVRNLISTG 371          
BLAST of GR407710 vs. TAIR peptide
Match: AT4G32440.2 (| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15659354 FORWARD LENGTH=393)

HSP 1 Score: 57.3806 bits (137), Expect = 4.521e-9
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = -1
Query:  214 AGVCESDEETCCSDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHL 462
            A  C SD E+ C   E        V +G          +   R EL +Y  TL  +++ GPLSWE+E  LT+LR+SLNIS+DEHL
Sbjct:  286 ADSCSSDAESSCGLGEEPRWKHSSVGDGA---------RNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSLNISDDEHL 361          
The following BLAST results are available for this feature:
BLAST of GR407710 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9IKU5_POPTR1.971e-2061.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HA19_POPTR5.735e-2061.63Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SEM1_RICCO3.718e-1958.75RNA binding protein, putative OS=Ricinus communis ... [more]
D7SUQ3_VITVI2.757e-1460.94Whole genome shotgun sequence of line PN40024, sca... [more]
Q6F393_ORYSJ1.368e-1347.73Expressed protein OS=Oryza sativa subsp. japonica ... [more]
A2XMW9_ORYSI1.368e-1347.73Putative uncharacterized protein OS=Oryza sativa s... [more]
B9S4Q9_RICCO3.048e-1343.43RNA binding protein, putative OS=Ricinus communis ... [more]
C5WX75_SORBI4.402e-1256.67Putative uncharacterized protein Sb01g005220 OS=So... [more]
Q6ZLC3_ORYSJ5.749e-1260.38Putative uncharacterized protein OS=Oryza sativa s... [more]
B9H8E9_POPTR5.749e-1248.75Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GR407710 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G20030.11.961e-1238.83| Symbols: | Plant Tudor-like RNA-binding protein... [more]
AT4G32440.19.733e-1241.05| Symbols: | Plant Tudor-like RNA-binding protein... [more]
AT4G32440.24.521e-941.18| Symbols: | Plant Tudor-like RNA-binding protein... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 22..43
score
IPR005491EMSY N-terminal domainPFAMPF03735ENTcoord: 43..98
score: 1.7
IPR005491EMSY N-terminal domainPROFILEPS51138ENTcoord: 41..102
score: 14

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407710 ID=GR407710; Name=GR407710; organism=Cicer arietinum; type=EST; length=480bp
ATACTTGATAATTGATATGTTCTTATTGAACGTGGCATCATAATTTCTAG
AACAGCATGAATAGCATAAAATGATGAATCTGAAAAATGTTATCTTGTTC
AAAACCTAATAATGCTGTACATGGGTTTTCAAAAATGAAAAATAATATAG
TAATCTCCCCTATGTAAACATTTAAAAATTCTGACCACCTGAAACTAAGT
TCTTTATCCCTGTCAAATGTTCATCATTTGAAATATTGAGTGAAATACGA
AGGTTAGTCAATAATTCTTCCTTTTCCCAACTTAAAGGACCAAAAGCATA
CATTGCTTCTAAGGTACAGTGATAAGCATTCAACTCTAACCTATGGATTC
TTTTTGTAACAACCTCTTTTGGAAAAATGGTGCATCCTTCATCCACATCT
TCAACATCTAGAGATTCTGCATCACTGCAACATGTTTCTTCATCACTTTC
ACAAACACCTGCTAACCGGTCACAAAAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR005491ENT_dom