GR407710
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR407710 vs. TrEMBL
Match: B9IKU5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_779012 PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.971e-20 Identity = 54/88 (61.36%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 184 DEETCCSDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGG 444 D +T SDAES D +E C++ E VT RIH LEL+AY CTL YA GPLSWE+E LLTNLRISLNISNDEHL ++NL+S G Sbjct: 305 DADTLSSDAESFYGHGDKEENCSLPLGEDVTVRIHSLELHAYRCTLGVFYASGPLSWEQEALLTNLRISLNISNDEHLMELRNLISAG 392
BLAST of GR407710 vs. TrEMBL
Match: B9HA19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_763466 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.735e-20 Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = -1 Query: 190 DEETCCSDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 444 D +T SDAES D +E C+ +E VT R+ RLEL+AY CTL A YA GPLSWE+E LLTNLRISLNISNDEHL ++NL+S Sbjct: 304 DADTLSSDAESFYGHGDGEENCSFPLEEDVTARVRRLELHAYRCTLGAFYASGPLSWEQEALLTNLRISLNISNDEHLMELRNLIS 389
BLAST of GR407710 vs. TrEMBL
Match: B9SEM1_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0220570 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.718e-19 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = -1 Query: 190 SDAESLDVEDVDEGCTIFP-KEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 426 SDAES +EG FP E + +HRLEL+AY CT+EA+YA GP SWE+EE++TNLR+SL+ISNDEHL ++NLVS Sbjct: 296 SDAESFCHRGYEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQEEMVTNLRLSLHISNDEHLMEVRNLVS 375
BLAST of GR407710 vs. TrEMBL
Match: D7SUQ3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035806001 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.757e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = -1 Query: 175 EVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGGQNF 366 ++ T IH LEL+AY TL A++A GPLSWE+ +LTNLR SL+ISNDEHL +KNL+S G NF Sbjct: 321 DLCTASIHSLELHAYRRTLAALHASGPLSWEQSTMLTNLRCSLHISNDEHLMELKNLISAGINF 384
BLAST of GR407710 vs. TrEMBL
Match: Q6F393_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBb0021G19.5 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.368e-13 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -1 Query: 190 CESDEETCCSDAESLDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453 C S E + A + D +D DE I +H LEL AY T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL ++ L+S Sbjct: 217 CTSGMEDDDAAAAAADEDDDDEPAAI--------AVHELELEAYQSTMRALYASGPLTWEQESLLTNLRLSLNISNEEHLLQLRRLLS 296
BLAST of GR407710 vs. TrEMBL
Match: A2XMW9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13894 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.368e-13 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -1 Query: 190 CESDEETCCSDAESLDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453 C S E + A + D +D DE I +H LEL AY T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL ++ L+S Sbjct: 736 CTSGMEDDDAAAAAADEDDDDEPAAI--------AVHELELEAYQSTMRALYASGPLTWEQESLLTNLRLSLNISNEEHLLQLRRLLS 815
BLAST of GR407710 vs. TrEMBL
Match: B9S4Q9_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0991190 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.048e-13 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 190 CESDEETCC---------SDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 453 C+ CC SDAES V+ T + ++ + IH LE AY T+ A+YA GPLSWE+E LLTNLR+SL+IS++EHL +K+L+S Sbjct: 284 CDFPSHNCCKALEAISDNSDAESSSFPCSSVNISSTPYFEQKLEANIHELEFQAYKSTVRALYASGPLSWEQESLLTNLRLSLHISDEEHLLQLKHLLS 382
BLAST of GR407710 vs. TrEMBL
Match: C5WX75_SORBI (Putative uncharacterized protein Sb01g005220 OS=Sorghum bicolor GN=Sb01g005220 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.402e-12 Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = -1 Query: 190 KEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 369 +E +H LEL AY T+ A+YA GPL+WE+E LLTNLR+SLNISN+EHL ++ L+S Sbjct: 247 EEEAAAGVHGLELEAYRSTMRALYASGPLTWEQEALLTNLRLSLNISNEEHLLQLRRLLS 306
BLAST of GR407710 vs. TrEMBL
Match: Q6ZLC3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1014_E09.10 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.749e-12 Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = -1 Query: 190 IHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 348 +H LEL AY T+ A YA GPL+WE+E LLTNLR+SLNI+N+EHL +++L+S Sbjct: 309 VHELELQAYQSTVRAFYALGPLTWEQESLLTNLRLSLNITNEEHLLQLRHLLS 361
BLAST of GR407710 vs. TrEMBL
Match: B9H8E9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_559616 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.749e-12 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = -1 Query: 190 SDAESLDVE-DVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVS 426 SDAES V + T + ++ + IH LE +AY T++A+YA GPLSWE+E LLTNLR+SL+IS++EHL ++ L+S Sbjct: 296 SDAESSFVSFSFIKRLTPYFEQKLEAEIHELEFHAYRSTVQALYASGPLSWEQESLLTNLRLSLHISDEEHLLHLRQLLS 375
BLAST of GR407710 vs. TAIR peptide
Match: AT5G20030.1 (| Symbols: | Plant Tudor-like RNA-binding protein | chr5:6764971-6766036 REVERSE LENGTH=326) HSP 1 Score: 68.5514 bits (166), Expect = 1.961e-12 Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = -1 Query: 190 TCCSDAESL--------------DVEDVDEGCTIFPKEVVTKR------IHRLELNAYHCTLEAMYAFGPL-SWEKEELLTNLRISLNISNDEHLTGIKNLVS 435 +CC D + L D E G K VV ++ +HRLEL+AY ++E ++A GP+ +WE+E +TNLR+ LNISN+EHL I+NL+S Sbjct: 216 SCCMDTDGLSAVSFNPIETGNSSDTESSSCGYGKVKKLVVPRKGSEAADVHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIRNLIS 318
BLAST of GR407710 vs. TAIR peptide
Match: AT4G32440.1 (| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15658692 FORWARD LENGTH=377) HSP 1 Score: 66.2402 bits (160), Expect = 9.733e-12 Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = -1 Query: 184 AGVCESDEETCCSDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHLTGIKNLVSGG 462 A C SD E+ C E V +G + R EL +Y TL +++ GPLSWE+E LT+LR+SLNIS+DEHL ++NL+S G Sbjct: 286 ADSCSSDAESSCGLGEEPRWKHSSVGDGA---------RNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSLNISDDEHLMEVRNLISTG 371
BLAST of GR407710 vs. TAIR peptide
Match: AT4G32440.2 (| Symbols: | Plant Tudor-like RNA-binding protein | chr4:15657295-15659354 FORWARD LENGTH=393) HSP 1 Score: 57.3806 bits (137), Expect = 4.521e-9 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = -1 Query: 214 AGVCESDEETCCSDAES--LDVEDVDEGCTIFPKEVVTKRIHRLELNAYHCTLEAMYAFGPLSWEKEELLTNLRISLNISNDEHL 462 A C SD E+ C E V +G + R EL +Y TL +++ GPLSWE+E LT+LR+SLNIS+DEHL Sbjct: 286 ADSCSSDAESSCGLGEEPRWKHSSVGDGA---------RNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSLNISDDEHL 361 The following BLAST results are available for this feature:
BLAST of GR407710 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR407710 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR407710 ID=GR407710; Name=GR407710; organism=Cicer arietinum; type=EST; length=480bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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