GR420638
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR420638 vs. TrEMBL
Match: B9HWL5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_880496 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.258e-11 Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = -1 Query: 141 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSE 455 DE QKYRLHTRRPS +++ ++ S A I+V P EY VA++TT GE + + A GIYAP+A PP V P+ ++ + EH E R +H E Sbjct: 267 DEVKSHLQKYRLHTRRPSPTIHTNS-SQQAPQFVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAAPPPAV-----PQNRQHKQSEHSQSEGRGSHGE 365
BLAST of GR420638 vs. TrEMBL
Match: B9HIZ7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_873104 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.298e-10 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = -1 Query: 129 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSEGVVH 455 DE QKYRLHTRRPS +++ ++N A I+V P EY VA++T + E + + A GIYAP+A PP V P+ +E + E +HSEG H Sbjct: 267 DEVKSHLQKYRLHTRRPSPTIHNNSNQQ-APQFVVVGGIWVPPPEYAAVAATTASAETSPISAANGIYAPIAAAPPTV-----PQKPHHVQYEPLQSEGGGSHSEGGAH 369
BLAST of GR420638 vs. TrEMBL
Match: D7T987_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011942001 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.858e-9 Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 132 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQ--VFSIKKPEFKKVELFEHISIEERTNHSEGVV 455 DE QKYRLHTRRP+ ++ + N A I+V P EY VA++T++GE T + GIYAPVA+ PP S ++ + K + + EER +HSEG V Sbjct: 231 DEVKSHLQKYRLHTRRPNPAIQHNGNPQ-APQFVVVGGIWVPPPEYTAVAATTSSGEATGVTTANGIYAPVASVPPSHPQGSTQRQQPMKPKKSQS---EERGSHSEGGV 336
BLAST of GR420638 vs. TrEMBL
Match: C6TBW2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.884e-7 Identity = 46/106 (43.40%), Postives = 53/106 (50.00%), Query Frame = -1 Query: 144 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLV--APFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHS 455 DE QK+RLHTRR S ++ SA+S SL NIFVQP EY SS GE+T AP GIYAPVA H P + H EE+ NHS Sbjct: 254 DEVKSHLQKFRLHTRR-SPIIHNSASSQAG-SLFLVGNIFVQPPEYA--TSSAFGGELTTATPAAPTGIYAPVAAHLP-----AGTHTSPIMKHSHSPFEEKNNHS 350
BLAST of GR420638 vs. TrEMBL
Match: B9ST36_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0353920 PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.214e-7 Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = -1 Query: 141 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSE 455 DE QKYRLHTRRPS +++ ++N A I+V P EY VA++T + E A GIYAPVA + P+ ++ + +H+ E R +HSE Sbjct: 276 DEVKSHLQKYRLHTRRPSPTIHNNSNPQ-APQFVVVGGIWVPPPEYAAVAATTASMETVTTAAANGIYAPVAAPLGTI-----PKQQRAQ-SQHLQSERRGSHSE 373 The following BLAST results are available for this feature:
BLAST of GR420638 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR420638 ID=GR420638; Name=GR420638; organism=Cicer arietinum; type=EST; length=473bpback to top |