GR420638

EST Overview
NameGR420638
Unique NameGR420638
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length473
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR420638 vs. TrEMBL
Match: B9HWL5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_880496 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.258e-11
Identity = 43/105 (40.95%), Postives = 59/105 (56.19%), Query Frame = -1
Query:  141 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSE 455
            DE     QKYRLHTRRPS +++ ++ S  A        I+V P EY  VA++TT GE + + A  GIYAP+A  PP V     P+ ++ +  EH   E R +H E
Sbjct:  267 DEVKSHLQKYRLHTRRPSPTIHTNS-SQQAPQFVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAAPPPAV-----PQNRQHKQSEHSQSEGRGSHGE 365          
BLAST of GR420638 vs. TrEMBL
Match: B9HIZ7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_873104 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.298e-10
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = -1
Query:  129 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSEGVVH 455
            DE     QKYRLHTRRPS +++ ++N   A        I+V P EY  VA++T + E + + A  GIYAP+A  PP V     P+      +E +  E   +HSEG  H
Sbjct:  267 DEVKSHLQKYRLHTRRPSPTIHNNSNQQ-APQFVVVGGIWVPPPEYAAVAATTASAETSPISAANGIYAPIAAAPPTV-----PQKPHHVQYEPLQSEGGGSHSEGGAH 369          
BLAST of GR420638 vs. TrEMBL
Match: D7T987_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011942001 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.858e-9
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = -1
Query:  132 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQ--VFSIKKPEFKKVELFEHISIEERTNHSEGVV 455
            DE     QKYRLHTRRP+ ++  + N   A        I+V P EY  VA++T++GE T +    GIYAPVA+ PP     S ++ +  K +  +    EER +HSEG V
Sbjct:  231 DEVKSHLQKYRLHTRRPNPAIQHNGNPQ-APQFVVVGGIWVPPPEYTAVAATTSSGEATGVTTANGIYAPVASVPPSHPQGSTQRQQPMKPKKSQS---EERGSHSEGGV 336          
BLAST of GR420638 vs. TrEMBL
Match: C6TBW2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.884e-7
Identity = 46/106 (43.40%), Postives = 53/106 (50.00%), Query Frame = -1
Query:  144 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLV--APFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHS 455
            DE     QK+RLHTRR S  ++ SA+S    SL    NIFVQP EY    SS   GE+T     AP GIYAPVA H P            +    H   EE+ NHS
Sbjct:  254 DEVKSHLQKFRLHTRR-SPIIHNSASSQAG-SLFLVGNIFVQPPEYA--TSSAFGGELTTATPAAPTGIYAPVAAHLP-----AGTHTSPIMKHSHSPFEEKNNHS 350          
BLAST of GR420638 vs. TrEMBL
Match: B9ST36_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0353920 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.214e-7
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = -1
Query:  141 DEAI*SKQKYRLHTRRPSSSVNESANSHTALSL*AP*NIFVQPAEYGGVASSTTTGEMTKLVAPFGIYAPVATHPPQVFSIKKPEFKKVELFEHISIEERTNHSE 455
            DE     QKYRLHTRRPS +++ ++N   A        I+V P EY  VA++T + E     A  GIYAPVA     +     P+ ++ +  +H+  E R +HSE
Sbjct:  276 DEVKSHLQKYRLHTRRPSPTIHNNSNPQ-APQFVVVGGIWVPPPEYAAVAATTASMETVTTAAANGIYAPVAAPLGTI-----PKQQRAQ-SQHLQSERRGSHSE 373          
The following BLAST results are available for this feature:
BLAST of GR420638 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9HWL5_POPTR6.258e-1140.95Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HIZ7_POPTR5.298e-1038.53Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7T987_VITVI5.858e-940.00Whole genome shotgun sequence of line PN40024, sca... [more]
C6TBW2_SOYBN1.884e-743.40Putative uncharacterized protein OS=Glycine max PE... [more]
B9ST36_RICCO3.214e-737.14DNA binding protein, putative OS=Ricinus communis ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 19..33
score
NoneNo IPR availableSEGsegsegcoord: 73..92
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420638 ID=GR420638; Name=GR420638; organism=Cicer arietinum; type=EST; length=473bp
TATCAAAAATTTTTTCTACAAGGATTTCTGCCACAAAACTTTTACATGTT
CAAAACTCAAAAGCCAGGTGAAGTAGTAGTGGTAGTAATAGTATGTGTAA
AGGATGATGAGGTAGGTGATGAGTTTGAATGAACAACCCCTTCACTATGA
TTAGTCCTTTCTTCTATTGAGATGTGCTCAAACAACTCTACTTTCTTAAA
CTCTGGCTTCTTAATTGAAAAAACTTGTGGAGGATGTGTGGCCACTGGTG
CATAAATTCCAAAAGGTGCCACCAACTTTGTCATTTCCCCTGTTGTTGTT
GATGAAGCTACCCCACCATATTCTGCAGGTTGGACAAAAATGTTTCATGG
TGCCTACAAGGACAATGCTGTATGCGAATTGGCACTTTCATTAACTGATG
AACTTGGTCTTCTTGTGTGTAAACGGTATTTCTGTTTTGACTAAATGGCT
TCATCCCATCAACATTTGTAAGG
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