GR420847

EST Overview


Name	GR420847
Unique Name	GR420847
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	631

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40_NICSY (Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris GN=UBICEP52-7 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.081e-23
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40_BRARA (Ubiquitin-60S ribosomal protein L40 OS=Brassica rapa PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.081e-23
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL403_CHLRE (Ubiquitin-60S ribosomal protein L40 OS=Chlamydomonas reinhardtii GN=UBI3 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.637e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTIE     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSL ALA +   +  ICRKCYARLHPRA       CGH+NQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL401_CHLRE (Ubiquitin-60S ribosomal protein L40 OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.637e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTIE     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSL ALA +   +  ICRKCYARLHPRA       CGH+NQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40B_ORYSJ (Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica GN=Ub-CEP52-2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.909e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSL ALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40B_ARATH (Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana GN=RPL40B PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.909e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLM LA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40A_ORYSJ (Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica GN=Ub-CEP52-1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.909e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSL ALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40A_ARATH (Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana GN=RPL40A PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.909e-23
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLM LA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL40_ACACA (Ubiquitin-60S ribosomal protein L40 OS=Acanthamoeba castellanii PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.323e-21
Identity = 69/135 (51.11%), Postives = 76/135 (56.30%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTIE     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGG+IEPSL  LA +      +CRKCYARLHPRA      +CGHSN  RPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGVIEPSLQVLARKYNCDKVVCRKCYARLHPRAVNCRKKKCGHSNHWRPKK 125

[Close]

BLAST of GR420847 vs. SwissProt
Match: RL402_SCHPO (Ubiquitin-60S ribosomal protein L40 OS=Schizosaccharomyces pombe GN=ubi2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.668e-21
Identity = 70/135 (51.85%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        + + IQK     +STLH     RGGIIEPSL ALA +   +  ICRKCYARL PRA      +CGH+NQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLSDYNIQK-----ESTLHLVLRLRGGIIEPSLKALASKYNCEKQICRKCYARLPPRATNCRKKKCGHTNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: B7FGY1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.991e-23
Identity = 75/135 (55.56%), Postives = 81/135 (60.00%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +     TICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: A5HSG7_ARTAN (Putative ubiquitin-conjugating enzyme OS=Artemisia annua PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.991e-23
Identity = 75/135 (55.56%), Postives = 81/135 (60.00%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +     TICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: A9PC21_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728795 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.743e-22
Identity = 74/135 (54.81%), Postives = 81/135 (60.00%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +   +  ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: Q45W78_ARAHY (Ubiquitin fusion protein OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: D6BR61_9ROSI (Ubiquitin C variant OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: B9SWD7_RICCO (Ubiquitin, putative OS=Ricinus communis GN=RCOM_0293400 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: B8LP57_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: B3TLP6_ELAGV (Ubiquitin fusion protein OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: A5AZI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012429 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.973e-22
Identity = 74/135 (54.81%), Postives = 80/135 (59.26%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TrEMBL
Match: A9PB15_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.072e-22
Identity = 73/135 (54.07%), Postives = 81/135 (60.00%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLMALA +   +  ICRKCYARLHPRA      +CGHSNQLRP+K
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQLRPEK 125

[Close]

BLAST of GR420847 vs. TAIR peptide
Match: AT3G52590.1 (| Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128)

HSP 1 Score: 107.071 bits (266), Expect = 8.164e-24
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLM LA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

[Close]

BLAST of GR420847 vs. TAIR peptide
Match: AT2G36170.1 (| Symbols: | Ubiquitin supergroup;Ribosomal protein L40e | chr2:15172153-15173046 FORWARD LENGTH=128)

HSP 1 Score: 107.071 bits (266), Expect = 8.164e-24
Identity = 73/135 (54.07%), Postives = 79/135 (58.52%), Query Frame = 3

Query:   81 MQIFVKTRPS*LGTLEVESSDTIE-----IQDKAMSKPTDKVFPQQRLIFA*RWTVSSYYNAPWPIQKVVLRLQSTLH-----RGGIIEPSLMALAHQDKSKYTICRKCYARLHPRAPQKE*TECGHSNQLRPKK 455
            MQIFVKT      TLEVESSDTI+     IQDK    P      QQRLIFA +        A + IQK     +STLH     RGGIIEPSLM LA +      ICRKCYARLHPRA      +CGHSNQLRPKK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD-----QQRLIFAGKQLEDGRTLADYNIQK-----ESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKK 125

The following BLAST results are available for this feature:

BLAST of GR420847 vs. SwissProt
BLAST of GR420847 vs. TrEMBL
BLAST of GR420847 vs. TAIR peptide

BLAST of GR420847 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL40_NICSY	2.081e-23	54.81	Ubiquitin-60S ribosomal protein L40 OS=Nicotiana s...	[more]
RL40_BRARA	2.081e-23	54.81	Ubiquitin-60S ribosomal protein L40 OS=Brassica ra...	[more]
RL403_CHLRE	4.637e-23	54.07	Ubiquitin-60S ribosomal protein L40 OS=Chlamydomon...	[more]
RL401_CHLRE	4.637e-23	54.07	Ubiquitin-60S ribosomal protein L40 OS=Chlamydomon...	[more]
RL40B_ORYSJ	7.909e-23	54.07	Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sat...	[more]
RL40B_ARATH	7.909e-23	54.07	Ubiquitin-60S ribosomal protein L40-2 OS=Arabidops...	[more]
RL40A_ORYSJ	7.909e-23	54.07	Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sat...	[more]
RL40A_ARATH	7.909e-23	54.07	Ubiquitin-60S ribosomal protein L40-1 OS=Arabidops...	[more]
RL40_ACACA	3.323e-21	51.11	Ubiquitin-60S ribosomal protein L40 OS=Acanthamoeb...	[more]
RL402_SCHPO	5.668e-21	51.85	Ubiquitin-60S ribosomal protein L40 OS=Schizosacch...	[more]

BLAST of GR420847 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGY1_MEDTR	5.991e-23	55.56	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5HSG7_ARTAN	5.991e-23	55.56	Putative ubiquitin-conjugating enzyme OS=Artemisia...	[more]
A9PC21_POPTR	1.743e-22	54.81	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q45W78_ARAHY	2.973e-22	54.81	Ubiquitin fusion protein OS=Arachis hypogaea PE=2 ...	[more]
D6BR61_9ROSI	2.973e-22	54.81	Ubiquitin C variant OS=Jatropha curcas PE=2 SV=1	[more]
B9SWD7_RICCO	2.973e-22	54.81	Ubiquitin, putative OS=Ricinus communis GN=RCOM_02...	[more]
B8LP57_PICSI	2.973e-22	54.81	Putative uncharacterized protein OS=Picea sitchens...	[more]
B3TLP6_ELAGV	2.973e-22	54.81	Ubiquitin fusion protein OS=Elaeis guineensis var....	[more]
A5AZI0_VITVI	2.973e-22	54.81	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9PB15_POPTR	5.072e-22	54.07	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of GR420847 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G52590.1	8.164e-24	54.07	\| Symbols: UBQ1, EMB2167, ERD16, HAP4 \| ubiquitin ...	[more]
AT2G36170.1	8.164e-24	54.07	\| Symbols: \| Ubiquitin supergroup;Ribosomal prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001975	Ribosomal protein L40e	PFAM	PF01020	Ribosomal_L40e	coord: 31..60 score: 3.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420847 ID=GR420847; Name=GR420847; organism=Cicer arietinum; type=EST; length=631bp
AGTGACCATATCATCTAGGCTAGAAACGCTGAATAACTGAGAAGAGAACA
CAATTAAACGAAGCGGCAAAGGTTGTAAAGATGCAGATCTTCGTCAAAAC
CCGACCATCATAACTGGGAACCCTCGAAGTCGAGAGCAGTGACACAATCG
AGATTCAAGACAAGGCAATGTCAAAGCCAACGGATAAGGTATTCCCCCAG
CAGCGTTTGATTTTCGCCTGAAGATGGACGGTAAGCAGCTATTACAACGC
ACCTTGGCCGATCCAGAAGGTTGTTCTCAGGCTTCAGTCAACACTTCATC
GTGGTGGTATCATCGAACCTTCTTTGATGGCTTTGGCTCATCAAGACAAA
AGCAAATACACCATATGCCGCAAATGCTATGCTCGTCTACACCCTAGGGC
TCCGCAAAAAGAGTAAACTGAGTGTGGACATAGCAATCAGTTGAGGCCAA
AGAAGTAAACTCTGGTTTTGAAGAAGATCATCTCTTTATTGTTTTATTGG
TGTTTGTTTTGTGAGACCTAAATTTCGTTGTTTTATTTATACTCCCGACT
CAACTCAATCTTCTGTTTTGAATTGGAGTTTATTTTGATGTTAAATGTAG
TCCGAGTTGGTATAATTTAAGTGGATTATAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001975	Ribosomal_eL40_dom

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