GR917877

EST Overview
NameGR917877
Unique NameGR917877
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length387
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR917877 vs. TrEMBL
Match: B9RAU5_RICCO (Zinc ion binding protein, putative OS=Ricinus communis GN=RCOM_1508680 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.463e-15
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGFR +EMN++LLKKNNGSIK VVMDL+ GE
Sbjct:  706 LCGVSEWDPILEELQEMGFRNEEMNRKLLKKNNGSIKGVVMDLLTGE 752          
BLAST of GR917877 vs. TrEMBL
Match: B9IEZ0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252306 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.596e-14
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVS+WDPILEEL EMGFR KEMNK LLKKNNGSIK VVMD++ G+
Sbjct:  626 LCGVSDWDPILEELQEMGFRDKEMNKLLLKKNNGSIKGVVMDILTGK 672          
BLAST of GR917877 vs. TrEMBL
Match: D7SHJ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007647001 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.066e-14
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = -1
Query:  226 HLCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLI 360
            HLCGV EWDPILEEL EMGF   E+NK+LL+KNNGS+KRVVMDLI
Sbjct:  778 HLCGVGEWDPILEELKEMGFNDTELNKKLLRKNNGSLKRVVMDLI 822          
BLAST of GR917877 vs. TrEMBL
Match: B9I3E6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728730 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.922e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCG +EWDPILEEL EMGF  KEMNK+LLKKNNGSI+ VVMD++ GE
Sbjct:  237 LCGFAEWDPILEELQEMGFSDKEMNKKLLKKNNGSIRGVVMDILTGE 283          
BLAST of GR917877 vs. TrEMBL
Match: A9PHP5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.922e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCG +EWDPILEEL EMGF  KEMNK+LLKKNNGSI+ VVMD++ GE
Sbjct:  276 LCGFAEWDPILEELQEMGFSDKEMNKKLLKKNNGSIRGVVMDILTGE 322          
BLAST of GR917877 vs. TrEMBL
Match: Q9SB64_ARATH (At4g24690 OS=Arabidopsis thaliana GN=F22K18.110 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.010e-13
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGF     NKRLLKKNNGSIK VVMDL+ GE
Sbjct:  655 LCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGE 701          
BLAST of GR917877 vs. TrEMBL
Match: Q56Z87_ARATH (Putative uncharacterized protein At4g24690 OS=Arabidopsis thaliana GN=At4g24690 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.010e-13
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGF     NKRLLKKNNGSIK VVMDL+ GE
Sbjct:   34 LCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGE 80          
BLAST of GR917877 vs. TrEMBL
Match: D7MGN8_ARALY (Ubiquitin-associated /TS-N domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492373 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.010e-13
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGF     NKRLLKKNNGSIK VVMDL+ GE
Sbjct:  660 LCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGE 706          
BLAST of GR917877 vs. TrEMBL
Match: B9DHS2_ARATH (AT4G24690 protein (Fragment) OS=Arabidopsis thaliana GN=AT4G24690 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.010e-13
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGF     NKRLLKKNNGSIK VVMDL+ GE
Sbjct:  215 LCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGE 261          
BLAST of GR917877 vs. TrEMBL
Match: Q70KT8_ORYSJ (TA4 protein (Fragment) OS=Oryza sativa subsp. japonica GN=ta4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.415e-12
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDP+LEEL EMGF   E+NK +L+KN GSIKR VMDLI  E
Sbjct:  158 LCGVSEWDPLLEELQEMGFEDTEINKEMLEKNGGSIKRAVMDLIARE 204          
BLAST of GR917877 vs. TAIR peptide
Match: AT4G24690.1 (| Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr4:12741191-12744202 FORWARD LENGTH=704)

HSP 1 Score: 78.1814 bits (191), Expect = 1.470e-15
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = -1
Query:  217 LCGVSEWDPILEELHEMGFRGKEMNKRLLKKNNGSIKRVVMDLINGE 357
            LCGVSEWDPILEEL EMGF     NKRLLKKNNGSIK VVMDL+ GE
Sbjct:  655 LCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGE 701          
The following BLAST results are available for this feature:
BLAST of GR917877 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RAU5_RICCO2.463e-1582.98Zinc ion binding protein, putative OS=Ricinus comm... [more]
B9IEZ0_POPTR1.596e-1480.85Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SHJ0_VITVI6.066e-1480.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9I3E6_POPTR7.922e-1476.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PHP5_POPTR7.922e-1476.60Putative uncharacterized protein OS=Populus tricho... [more]
Q9SB64_ARATH3.010e-1380.85At4g24690 OS=Arabidopsis thaliana GN=F22K18.110 PE... [more]
Q56Z87_ARATH3.010e-1380.85Putative uncharacterized protein At4g24690 OS=Arab... [more]
D7MGN8_ARALY3.010e-1380.85Ubiquitin-associated /TS-N domain-containing prote... [more]
B9DHS2_ARATH3.010e-1380.85AT4G24690 protein (Fragment) OS=Arabidopsis thalia... [more]
Q70KT8_ORYSJ7.415e-1272.34TA4 protein (Fragment) OS=Oryza sativa subsp. japo... [more]
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BLAST of GR917877 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G24690.11.470e-1580.85| Symbols: | ubiquitin-associated (UBA)/TS-N doma... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 13..28
score
IPR009060UBA-likeSUPERFAMILY46934UBA-likecoord: 16..56
score: 4.3

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR917877 ID=GR917877; Name=GR917877; organism=Cicer arietinum; type=EST; length=387bp
GTTGTAGCAAATATACTTACGGCATAGTCTCGAGTCTTATTAAATATATG
AATAGAACATGAGATCGATCAAACTGTTTAATTGCAATGACATACCACCG
CAACACATGATCGAGAAAGGAAATTAGATAATAGTGCGCCTAGCAAATAT
TTAGCGTTTTCACAGAACGTTTCGCCAACGTAACCCATATAACATCTGAC
ATATTAACTAAACCTACTCTCCATTGATTAAATCCATAACAACTCGTTTA
ATGCTTCCATTGTTTTTCTTTAGCAGCCTCTTGTTCATCTCTTTGCCACG
GAAACCCATCTCATGCAACTCTTCAAGGATAGGATCCCACTCAGAAACAC
CACATAGATGCCTACTGACTGCTCCAGATTGTACCTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf