HO063824

EST Overview
NameHO063824
Unique NameHO063824
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length378
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of HO063824 vs. TrEMBL
Match: C6T5B3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.429e-7
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 3 
Query:   42 TLLKDAAKAIQSMIQKNPDSLNFNVIALSKKS 137
            TLL+DAAKAIQSMIQKNPDS NFNVIAL KKS
Sbjct:  195 TLLRDAAKAIQSMIQKNPDSFNFNVIALCKKS 226
[Close]
BLAST of HO063824 vs. TrEMBL
Match: C6T574_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.412e-7
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3 
Query:   42 TLLKDAAKAIQSMIQKNPDSLNFNVIALSKKSQ 140
            TLL+DAAK IQSMIQKNP SLNFNVIA+SKKS+
Sbjct:  201 TLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSK 233
[Close]
BLAST of HO063824 vs. TAIR peptide
Match: AT4G17510.1 (| Symbols: UCH3 | ubiquitin C-terminal hydrolase 3 | chr4:9767114-9768648 REVERSE LENGTH=234)

HSP 1 Score: 48.9062 bits (115), Expect = 8.860e-7
Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 3 
Query:   42 TLLKDAAKAIQSMIQKNPDSLNFNVIALSKKS 137
            TLLKDA K I+ MI+KNP SLNFN+IA+SK++
Sbjct:  203 TLLKDATKVIKKMIEKNPGSLNFNLIAISKRT 234
The following BLAST results are available for this feature:
BLAST of HO063824 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6T5B3_SOYBN2.429e-790.63Putative uncharacterized protein OS=Glycine max PE... [more]
C6T574_SOYBN5.412e-784.85Putative uncharacterized protein (Fragment) OS=Gly... [more]
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BLAST of HO063824 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G17510.18.860e-768.75| Symbols: UCH3 | ubiquitin C-terminal hydrolase 3... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 56..68
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063824 ID=HO063824; Name=HO063824; organism=Cicer arietinum; type=EST; length=378bp
CGGCCGCGGGAATTCGATTTCGAGCGGCCGCCCGGGCAGGTACTTTGTTG
AAGGATGCAGCTAAAGCCATCCAGAGCATGATCCAGAAGAATCCAGATTC
CCTCAACTTCAATGTCATTGCATTATCAAAGAAATCCCAGTGATGGATAT
TAAGGCAGTCAATTTGAGCTTTTTTAGGGTTAATGAACATTTTGATGTGA
TTTCTTCATGTTATCTGTAGTATAATCTCACGGCATTCTCATGCATCTTT
TTATTCACTTTATCTCTGTGTATGCTCAGATTTGTTTTTACATTCAAAGT
GATCTTGTAAGCTTATGCCTCTCTGAATAAAACTTGATGTAGTAACATTT
CATGATGAAGAGTATGACCGGCATTTCC
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