HO664258

EST Overview
NameHO664258
Unique NameHO664258
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length607
Libraries
Library NameType
LIBEST_026619 TDZ treated Chickpea SSH librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of HO664258 vs. SwissProt
Match: LYM1_ARATH (LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana GN=At1g21880 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.609e-36
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            R  YC PASLAVSCSSMQC+NSNLMLGN+TVQQT  GCNVT+C Y+GI NGTI T L  SLQPRCPG Q+F PL+APP +V ++  +           G+   SP SS++P  GI    PANGP
Sbjct:  261 RNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQQFAPLLAPPDTVPRDVMYAPAPSPDFDGPGSIASSPRSSMLPGGGILPGNPANGP 384          
BLAST of HO664258 vs. SwissProt
Match: LYM3_ARATH (LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=At1g77630 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.881e-29
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEF--XXXXXXXXQSDGTGGRSPTSSVVPSTGISGFT----------PANGP 392
            R  YC PAS++VSCSSM+C+NSN MLGN+T QQ+  GC +T+CSY+G  +GTI TTL+ SLQPRCPG Q+  PLIAPP +V KE  +          + D   G   + + VP+    G T          PANGP
Sbjct:  258 RSMYCEPASISVSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLIAPPDNVPKELMYLPSPSPSPSPEFDDIAGGGSSIAAVPAASPGGATVSSSNSIPGNPANGP 393          
BLAST of HO664258 vs. TrEMBL
Match: B9GU52_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_643636 PE=4 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.344e-37
Identity = 80/124 (64.52%), Postives = 95/124 (76.61%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPT--SSVVPSTG-ISGFTPANGP 392
            YCMPASLAVSCSSMQC+NSNLMLGNVTVQQ+  GCNVTSC+Y G VNGTI TTL+  LQPRCPG Q+FPPL+ PPT+V ++S F        QSDG+   +PT  + VVP+TG + G  PA+GP
Sbjct:  259 YCMPASLAVSCSSMQCRNSNLMLGNVTVQQSSAGCNVTSCNYGGYVNGTIMTTLSTYLQPRCPGSQQFPPLVVPPTTVIRDSTF--APAPAPQSDGSSTPTPTPKTEVVPATGSLPGLPPASGP 380          
BLAST of HO664258 vs. TrEMBL
Match: Q5XF34_ARATH (At1g21880 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.660e-35
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            R  YC PASLAVSCSSMQC+NSNLMLGN+TVQQT  GCNVT+C Y+GI NGTI T L  SLQPRCPG Q+F PL+APP +V ++  +           G+   SP SS++P  GI    PANGP
Sbjct:  261 RNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQQFAPLLAPPDTVPRDVMYAPAPSPDFDGPGSIASSPRSSMLPGGGILPGNPANGP 384          
BLAST of HO664258 vs. TrEMBL
Match: B9RJ77_RICCO (LysM domain GPI-anchored protein 1, putative OS=Ricinus communis GN=RCOM_1032080 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.243e-35
Identity = 74/122 (60.66%), Postives = 93/122 (76.23%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSP-TSSVVPSTGISGFTPANGP 392
            YCMPASLAVSCSSMQC+NSNLM+GNVT Q++  GCNVTSC+Y G VNG+I T L+ SLQPRCPG Q+FPPL+APPT+V ++S          QSDG+   +P T+++VPSTG++   P  GP
Sbjct:  259 YCMPASLAVSCSSMQCRNSNLMVGNVTWQRSSAGCNVTSCNYGGYVNGSIVTILSTSLQPRCPGPQQFPPLLAPPTTVIRDSTSGPAPAPSPQSDGSVTTTPKTTTLVPSTGLA---PMGGP 377          
BLAST of HO664258 vs. TrEMBL
Match: D7KKV4_ARALY (Peptidoglycan-binding LysM domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472424 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.372e-34
Identity = 75/125 (60.00%), Postives = 87/125 (69.60%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGIS-GFTPANGP 392
            R  YC PASLAVSCSSMQC+NSNLMLGN+TVQQ+  GCNVT+C Y+GI NGTI T L  SLQPRCPG Q+F PL+APP +V K+  +           G+   SP SSV+PS G S    PANGP
Sbjct:  261 RNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQSSAGCNVTTCDYNGIANGTILTLLTRSLQPRCPGPQQFAPLLAPPDTVPKDVMYAPAPSPDFDGPGSIASSPRSSVLPSGGDSVPGNPANGP 385          
BLAST of HO664258 vs. TrEMBL
Match: B2ZAQ1_9ROSI (Peptidoglycan-binding LysM domain-containing related protein OS=Gossypioides kirkii PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.538e-33
Identity = 77/125 (61.60%), Postives = 87/125 (69.60%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGI-SGFTPANGP 392
            R  YCMP+SLAVSCSSMQCK+SNL LGNVTVQQ+  GCNVTSC+Y G  NGTI T L+ SLQPRCPG Q+FPPL+APPT V ++S F        QSDG G  +     VPSTG   G  PA  P
Sbjct:  262 RNLYCMPSSLAVSCSSMQCKSSNLKLGNVTVQQSTAGCNVTSCAYGGYANGTIITWLSSSLQPRCPGPQQFPPLVAPPTHVTRDSAF--APAPAPQSDG-GTTTTVPKTVPSTGSHPGLGPAGAP 383          
BLAST of HO664258 vs. TrEMBL
Match: Q69T51_ORYSJ (Putative Erwinia induced protein 1 OS=Oryza sativa subsp. japonica GN=P0664C05.26 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.489e-28
Identity = 66/121 (54.55%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            YC PASL  SCSSMQC NSNLMLGNVT Q T GGCNV+SCSY G+VNGTIAT+L+  LQP CPG  +FPPL A P +V + S           S   G       +    G S  +PANGP
Sbjct:  267 YCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGS-------YLAPSPAPGAGEAGGDIPGFPGSSNVSPANGP 380          
BLAST of HO664258 vs. TrEMBL
Match: Q4VVD8_ORYSJ (LysM-domain GPI-anchored protein OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.489e-28
Identity = 66/121 (54.55%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            YC PASL  SCSSMQC NSNLMLGNVT Q T GGCNV+SCSY G+VNGTIAT+L+  LQP CPG  +FPPL A P +V + S           S   G       +    G S  +PANGP
Sbjct:  267 YCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGS-------YLAPSPAPGAGEAGGDIPGFPGSSNVSPANGP 380          
BLAST of HO664258 vs. TrEMBL
Match: Q0DDQ4_ORYSJ (Os06g0208800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0208800 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.489e-28
Identity = 66/121 (54.55%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            YC PASL  SCSSMQC NSNLMLGNVT Q T GGCNV+SCSY G+VNGTIAT+L+  LQP CPG  +FPPL A P +V + S           S   G       +    G S  +PANGP
Sbjct:   21 YCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGS-------YLAPSPAPGAGEAGGDIPGFPGSSNVSPANGP 134          
BLAST of HO664258 vs. TrEMBL
Match: B9FS41_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_20541 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.489e-28
Identity = 66/121 (54.55%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            YC PASL  SCSSMQC NSNLMLGNVT Q T GGCNV+SCSY G+VNGTIAT+L+  LQP CPG  +FPPL A P +V + S           S   G       +    G S  +PANGP
Sbjct:  190 YCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGS-------YLAPSPAPGAGEAGGDIPGFPGSSNVSPANGP 303          
BLAST of HO664258 vs. TrEMBL
Match: B8B3X7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22104 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.489e-28
Identity = 66/121 (54.55%), Postives = 75/121 (61.98%), Query Frame = 3
Query:   30 YCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            YC PASL  SCSSMQC NSNLMLGNVT Q T GGCNV+SCSY G+VNGTIAT+L+  LQP CPG  +FPPL A P +V + S           S   G       +    G S  +PANGP
Sbjct:  267 YCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGS-------YLAPSPAPGAGEAGGDIPGFPGSSNVSPANGP 380          
BLAST of HO664258 vs. TAIR peptide
Match: AT1G21880.2 (| Symbols: LYM1 | lysm domain GPI-anchored protein 1 precursor | chr1:7680689-7682526 FORWARD LENGTH=416)

HSP 1 Score: 151.754 bits (382), Expect = 2.720e-37
Identity = 73/124 (58.87%), Postives = 86/124 (69.35%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEFXXXXXXXXQSDGTGGRSPTSSVVPSTGISGFTPANGP 392
            R  YC PASLAVSCSSMQC+NSNLMLGN+TVQQT  GCNVT+C Y+GI NGTI T L  SLQPRCPG Q+F PL+APP +V ++  +           G+   SP SS++P  GI    PANGP
Sbjct:  261 RNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILTMLTRSLQPRCPGPQQFAPLLAPPDTVPRDVMYAPAPSPDFDGPGSIASSPRSSMLPGGGILPGNPANGP 384          
BLAST of HO664258 vs. TAIR peptide
Match: AT1G77630.1 (| Symbols: | Peptidoglycan-binding LysM domain-containing protein | chr1:29173726-29175387 FORWARD LENGTH=423)

HSP 1 Score: 127.102 bits (318), Expect = 7.174e-30
Identity = 65/136 (47.79%), Postives = 83/136 (61.03%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIATTLNPSLQPRCPGQQEFPPLIAPPTSVEKESEF--XXXXXXXXQSDGTGGRSPTSSVVPSTGISGFT----------PANGP 392
            R  YC PAS++VSCSSM+C+NSN MLGN+T QQ+  GC +T+CSY+G  +GTI TTL+ SLQPRCPG Q+  PLIAPP +V KE  +          + D   G   + + VP+    G T          PANGP
Sbjct:  258 RSMYCEPASISVSCSSMRCRNSNFMLGNITSQQSSSGCKLTTCSYNGFASGTILTTLSMSLQPRCPGPQQLAPLIAPPDNVPKELMYLPSPSPSPSPEFDDIAGGGSSIAAVPAASPGGATVSSSNSIPGNPANGP 393          
BLAST of HO664258 vs. TAIR peptide
Match: AT1G21880.1 (| Symbols: LYM1 | lysm domain GPI-anchored protein 1 precursor | chr1:7680689-7682048 FORWARD LENGTH=316)

HSP 1 Score: 95.1301 bits (235), Expect = 3.021e-20
Identity = 43/55 (78.18%), Postives = 47/55 (85.45%), Query Frame = 3
Query:   21 RPRYCMPASLAVSCSSMQCKNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIAT 185
            R  YC PASLAVSCSSMQC+NSNLMLGN+TVQQT  GCNVT+C Y+GI NGTI T
Sbjct:  261 RNLYCEPASLAVSCSSMQCRNSNLMLGNITVQQTSAGCNVTTCDYNGIANGTILT 315          
The following BLAST results are available for this feature:
BLAST of HO664258 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
LYM1_ARATH2.609e-3658.87LysM domain-containing GPI-anchored protein 1 OS=A... [more]
LYM3_ARATH6.881e-2947.79LysM domain-containing GPI-anchored protein 2 OS=A... [more]
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BLAST of HO664258 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GU52_POPTR1.344e-3764.52Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q5XF34_ARATH3.660e-3558.87At1g21880 OS=Arabidopsis thaliana PE=2 SV=1[more]
B9RJ77_RICCO6.243e-3560.66LysM domain GPI-anchored protein 1, putative OS=Ri... [more]
D7KKV4_ARALY2.372e-3460.00Peptidoglycan-binding LysM domain-containing prote... [more]
B2ZAQ1_9ROSI1.538e-3361.60Peptidoglycan-binding LysM domain-containing relat... [more]
Q69T51_ORYSJ1.489e-2854.55Putative Erwinia induced protein 1 OS=Oryza sativa... [more]
Q4VVD8_ORYSJ1.489e-2854.55LysM-domain GPI-anchored protein OS=Oryza sativa s... [more]
Q0DDQ4_ORYSJ1.489e-2854.55Os06g0208800 protein (Fragment) OS=Oryza sativa su... [more]
B9FS41_ORYSJ1.489e-2854.55Putative uncharacterized protein OS=Oryza sativa s... [more]
B8B3X7_ORYSI1.489e-2854.55Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of HO664258 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G21880.22.720e-3758.87| Symbols: LYM1 | lysm domain GPI-anchored protein... [more]
AT1G77630.17.174e-3047.79| Symbols: | Peptidoglycan-binding LysM domain-co... [more]
AT1G21880.13.021e-2078.18| Symbols: LYM1 | lysm domain GPI-anchored protein... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..38
score: NAcoord: 67..77
score
NoneNo IPR availableSEGsegsegcoord: 94..101
score: NAcoord: 131..143
score: NAcoord: 144..162
score
NoneNo IPR availableSEGsegsegcoord: 70..84
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO664258 ID=HO664258; Name=HO664258; organism=Cicer arietinum; type=EST; length=607bp
AGCGTGGTCGCGGCCGAGGTCGGCCGAGGTACTGTATGCCGGCTTCTCTA
GCTGTTTCTTGCTCAAGCATGCAATGTAAAAACAGCAATCTTATGCTTGG
GAATGTTACCGTGCAACAGACTGGTGGTGGTTGCAATGTGACTTCTTGTA
GTTATGATGGTATTGTTAATGGCACCATAGCGACAACGTTGAACCCGTCT
CTTCAGCCTCGATGTCCAGGGCAACAGGAATTCCCTCCTCTTATCGCCCC
ACCTACATCGGTTGAGAAGGAATCAGAATTTGCACCAGCACCATCGCCAT
CGTCGCAGTCAGATGGAACTGGTGGGAGATCACCCACATCCTCCGTGGTG
CCTTCAACAGGGATTTCAGGATTTACTCCTGCAAATGGCCCTATTAGTGG
GATTTCTTCTGGCGCGTCTGCTGCATCCTCCTTGGTGAAGCCATTACCAA
CATTGACGCCTGCACTTGTGTTATTACTCGTCAAGTTGATGATCCCTGTG
GCATTGTAATCTTCAAAATTTTATGGTGGGTTTAATTTATGTCTTTATCA
CAGGCCCTCCTAACTATTGTAGTTGCTCATATTCATTTGTACCTCGGCCG
CGACCAC
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