FE670500

EST Overview
NameFE670500
Unique NameFE670500
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length602
Libraries
Library NameType
LIBEST_022821 Chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of FE670500 vs. TrEMBL
Match: D3GBU7_LOTJA (Auxin response factor 3b OS=Lotus japonicus GN=ARF3b PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.417e-15
Identity = 45/96 (46.88%), Postives = 55/96 (57.29%), Query Frame = -2
Query:  314 PSLPDKPIFSSGLAQEGTNPFGMH-DFHXXXXXXXXXXXXXXXXSVAIPRGNQDMVSSCKTGCRLFGFSLTDDTNITNKEAAVASTITSQLNSGPS 598
            PSL D PI S G AQEG N FG+  +FH                 V+  R +Q++V SCK+GCRLFGFSLT+DT+I N+E       T   NSGPS
Sbjct:  606 PSLSDNPILS-GRAQEGANTFGVFSNFHSQLGSSRLHDS------VSAMRSSQELVPSCKSGCRLFGFSLTEDTHIANEE-------TEASNSGPS 687          

HSP 2 Score: 35.4242 bits (80), Expect = 1.417e-15
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = -1
Query:  249 FHSSHALRTKAVENNCTKGVLQY 317
            FH   +LR+K V +NCTKGVLQY
Sbjct:  696 FHPGLSLRSKGVGSNCTKGVLQY 718          
BLAST of FE670500 vs. TrEMBL
Match: A2Q532_MEDTR (Transcriptional factor B3; Auxin response factor OS=Medicago truncatula GN=MtrDRAFT_AC158497g40v2 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.688e-14
Identity = 47/75 (62.67%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  374 PSLPDKPIFSSGLAQEGTNPFGMHDFHXXXXXXXXXXXXXXXXSVAIPRGNQDMVSSCKTGCRLFGFSLTDDTNI 598
            PSL DKPI SSGLA EGT  FG+HDFH                SV   R NQDMV SCKTGCRLFGFSLTDDT+I
Sbjct:  609 PSLSDKPILSSGLALEGTTSFGVHDFH---NNNNLLDGSRSRDSVLAMRDNQDMV-SCKTGCRLFGFSLTDDTHI 679          
BLAST of FE670500 vs. TrEMBL
Match: D3GBU6_LOTJA (Auxin response factor 3a OS=Lotus japonicus GN=ARF3a PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 2.483e-9
Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = -2
Query:  314 AQEGTNPFGMHDFHXXXXXXXXXXXXXXXXSVAIPRGNQDMVSSCKTGCRLFGFSLTDDTNITNKEAAVASTITSQLNSGPS 559
            AQE  N  G  + H                 +++ RG Q++VSSCK+ CR+FGFSLT+     N+EA   ST+T QLN G S
Sbjct:  574 AQEDANSLGFINLHNQLDSSHSHDP------ISLLRGPQEVVSSCKSSCRVFGFSLTEGARSANEEAD-PSTVTCQLNPGTS 648          

HSP 2 Score: 29.6462 bits (65), Expect = 2.483e-9
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = -1
Query:  249 FHSSHALRTKAVENNCTKGVLQY 317
            F   H+LR+KAV   C+K VLQY
Sbjct:  657 FRPRHSLRSKAVGKYCSKEVLQY 679          
The following BLAST results are available for this feature:
BLAST of FE670500 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D3GBU7_LOTJA1.417e-1546.88Auxin response factor 3b OS=Lotus japonicus GN=ARF... [more]
A2Q532_MEDTR2.688e-1462.67Transcriptional factor B3; Auxin response factor O... [more]
D3GBU6_LOTJA2.483e-940.24Auxin response factor 3a OS=Lotus japonicus GN=ARF... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..21
score
NoneNo IPR availableSEGsegsegcoord: 29..45
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE670500 ID=FE670500; Name=FE670500; organism=Cicer arietinum; type=EST; length=602bp
GGGATAAAATAAATATGCATAGACTTACCATAATAGTTTTACTTAATACT
ATGCATCTCTTTACATCACAAAAAGTACGCATAAGTTTAATACAGAAACA
CTTTAACTAGTTCATTACCACATTCAAATACAAATTACTCAAATAGAATA
ACAATTTTCTTGAAACCCAAGTTATTATTATAGCAAAATACATAACCAGG
TAAACTAAGGAAACATTCTTCTGCTATATCAGATGATTCCTCAGTTCAAT
ACTGCAATACACCTTTGGTACAGTTATTCTCAACCGCCTTAGTCCTTAGC
GCATGGCTTGAATGGAAGGTCCAGAATTCAATTGAGAAGTGATAGTAGAG
GCAACAGCAGCTTCTTTATTTGTAATGTTCGTGTCGTCGGTTAATGAAAA
CCCAAAGAGTCTGCAGCCAGTTTTACATGACGAAACCATATCTTGATTGC
CTCTCGGTATTGCAACTGAATTGTGAAGCCTTGAATTGTTGGACTGATTA
TTAATATTGTTATTATTATGAAAATCATGCATACCAAAAGGATTTGTGCC
TTCCTGAGCTAGTCCACTAGAGAAAATAGGTTTGTCGGGTAGTGAAGGCG
TG
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