FE671389

EST Overview


Name	FE671389
Unique Name	FE671389
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	586

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE671389 vs. TrEMBL
Match: D7TTJ2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013266001 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.949e-15
Identity = 62/168 (36.90%), Postives = 77/168 (45.83%), Query Frame = 2

Query:  110 MAVQAQYPSNVXXXXXXSRNGQEEHDYSXXXXXXXXXXXXMLCTNNNHGITTNSRKRDRE---GTETGHTTSPNVNAMNHFSLQSQPSHFIHLSHLHNQQQNVVSTGLR------XXXXXXXXXXXXXXXXXXXXXXXXXXXGINSQIKQQQHELDQFLQSQGENVRR 586
            MAVQAQYPSNV       ++G+ +                +     N+G+  NSRKR RE    T TG   +P VN+   F LQ QPS  I LS LHN Q NVVSTGLR                                    +QIK Q+ E+DQFL++QGE +RR
Sbjct:    1 MAVQAQYPSNVLLLNRGVQDGKIDCSLQPQPGGFLDQSHMLF----NNGVVANSRKRGREVFGNTNTGGVVAPTVNS---FPLQPQPSQLIDLSVLHNHQPNVVSTGLRLAFGEQHLQHPQQQQQQQQNQQQQSAVLSLLSEDFTAQIKHQRDEIDQFLRAQGEQLRR 161

[Close]

BLAST of FE671389 vs. TrEMBL
Match: B9N2T7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580140 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.052e-12
Identity = 63/178 (35.39%), Postives = 77/178 (43.26%), Query Frame = 2

Query:  110 MAVQAQYPSNVXXXXXXSRNGQEEHDYSXXXXXXXXXXXXMLCTNNNHGITTNSRKRDREGTETGHTTSPNVNAMNHFSLQSQP-----SHFIHLSHLHNQQQ-------NVVSTGLR-------XXXXXXXXXXXXXXXXXXXXXXXXXXXGINSQIKQQQHELDQFLQSQGENVRR 586
            MAVQAQYPSN+      +RNGQE  DYS             +  NN  G   N RKR R    TG  T+     +N F +Q QP     +  I LS LHN +        NVVSTGLR                                    + QIK+Q+ E+DQFLQ+QGE +RR
Sbjct:    1 MAVQAQYPSNILLL---NRNGQEGQDYSLQPQPGGYLDQSSMLLNNGGG--NNQRKRGR-AAPTG--TTATTTTINQFCMQPQPQPLSTTQLIDLSQLHNHRHHQPQPNPNVVSTGLRLSFGDQQQQNHHYQQQNFGTGACQSSALLSLSSEDFSIQIKRQRDEIDQFLQAQGEQLRR 170

The following BLAST results are available for this feature:

BLAST of FE671389 vs. TrEMBL

BLAST of FE671389 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
D7TTJ2_VITVI	2.949e-15	36.90	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9N2T7_POPTR	3.052e-12	35.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 32..37 score: NAcoord: 49..60 score: NAcoord: 127..153 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE671389 ID=FE671389; Name=FE671389; organism=Cicer arietinum; type=EST; length=586bp
ATTCAGAGAAAGAGGGAGCGAGCAGAATAAGGTGTCTCTCTTGGACTGAT
TCGTTTCAATCGCATATATCTCTTCCCCACCCAACACCAATTCCCTCCAA
CAATTCTTCATGGCCGTTCAAGCTCAATATCCATCTAATGTCCTCCTTCT
AAACAATAATAGCAGAAACGGACAAGAAGAACACGATTACTCCTTACAAC
CACAACCAGGACTACCACCTCATCCCCATATGCTATGCACCAACAACAAC
CATGGAATTACTACTAATTCTCGCAAGAGGGATAGAGAAGGAACAGAAAC
AGGACACACTACATCCCCTAATGTTAATGCTATGAATCATTTCTCTTTGC
AATCTCAACCTTCACATTTTATACATCTTTCACACCTCCATAATCAACAA
CAAAATGTAGTCTCAACTGGCCTTCGCTTATCATTCGATGATCAAAGGTT
ACAATTTCAACAACAAACTTCTCAATCCTCCTCTACTTTCTTATCTCTAT
TATCACAAGGAATCAATTCTCAAATCAAACAACAACAACATGAATTAGAC
CAATTCCTTCAAAGCCAGGGAGAGAATGTACGGCGG

Search form