GR390714

EST Overview
NameGR390714
Unique NameGR390714
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length516
Libraries
Library NameType
LIBEST_024777 ICC1882 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GR390714 vs. TrEMBL
Match: D7TAR2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010369001 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.350e-10
Identity = 35/63 (55.56%), Postives = 39/63 (61.90%), Query Frame = -2 
Query:    6 KHFNFETLMKGTARTQAPTATNYDVGSTTWVDLRPAPLLSAMEVTCLSHGPS*SPIDSIQVSI 194
            K  N   +    ART+ P+ TNYDV S TW DLR  PL SAMEVT L HG S S ID  QVS+
Sbjct:   29 KRLNHHLIGAEVARTRTPSTTNYDVDSATWADLRAVPLPSAMEVTVLGHGSSRSAIDPAQVSM 91
[Close]
BLAST of GR390714 vs. TrEMBL
Match: B9ICR6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_575649 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.206e-8
Identity = 33/46 (71.74%), Postives = 33/46 (71.74%), Query Frame = 1 
Query:   28 MGDQEGPWLRQVTSIALRRGAGLRSTQVVEPTS*FVAVGACVRAVP 165
            MGD EGPW R VTSIA RRGAGLRS Q  EPTS FVA GA   A P
Sbjct:    1 MGDPEGPWSRSVTSIAHRRGAGLRSPQEGEPTSKFVAEGAARVAAP 46
The following BLAST results are available for this feature:
BLAST of GR390714 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
D7TAR2_VITVI3.350e-1055.56Whole genome shotgun sequence of line PN40024, sca... [more]
B9ICR6_POPTR3.206e-871.74Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR390714 ID=GR390714; Name=GR390714; organism=Cicer arietinum; type=EST; length=516bp
GCGGGGATACTTACCTGGATGGAGTCAATGGGTGATCAAGAAGGCCCATG
GCTTAGGCAAGTGACCTCCATTGCACTTAGGAGGGGTGCTGGCCTAAGGT
CTACCCAAGTGGTGGAGCCTACATCGTAATTTGTTGCTGTGGGGGCCTGC
GTTCGCGCGGTCCCTTTCATTAAAGTTTCAAAATTAAAGTGTTTTTAAAT
ACATTTATTTGTTTTTTAGTTAAAATTGTAATGTAATCAGAATTTTCTCT
TGATGCTACTGCTGGGAAGACCTCTTCGCAATCTCCTTTCCACCTGACGA
GCACATCAGACAATCGGCACACTTCTGGTTAACAGGGATGATTATGTTTT
TCTGATATATATGCTGATGTCTCTATTCCGGAAGAAATCATTTAAGTTTT
CACTTATAATGTCTCTAATCCANAANAAATCATTTAAGTTTTCACTTATA
ATTGTGTAANANATTATTGAANTACCAAANTATGTTTTCTCTTGNAATTG
NTCAAAATTTGATTGC
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