GR392266

EST Overview


Name	GR392266
Unique Name	GR392266
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	439

Libraries


Library Name	Type
LIBEST_024778 ICC1882 field drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR392266 vs. SwissProt
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.967e-8
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = -1

Query:  281 CCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 418
            CCIC   Y DG  + +L C   FHS+CI +WL  +  CP+CK   L
Sbjct:  307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNIL 352

[Close]

BLAST of GR392266 vs. SwissProt
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.838e-8
Identity = 21/46 (45.65%), Postives = 25/46 (54.35%), Query Frame = -1

Query:  281 CCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 418
            CCIC   Y DG  +  L CG  FH SC+ +WL     CP+CK   L
Sbjct:  353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 398

[Close]

BLAST of GR392266 vs. SwissProt
Match: DZIP3_MOUSE (E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus GN=Dzip3 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.969e-7
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = -1

Query:  281 EPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 424
            EPC IC E  +  +N+  L C  +FHS CI+ WLMQ+  CP C+   L
Sbjct: 1142 EPCVICHENLSP-ENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHVL 1188

[Close]

BLAST of GR392266 vs. SwissProt
Match: RNF12_XENTR (E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = -1

Query:  281 LEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 427
            L+ C +C  EY +G  +  L C  E+H  CI +WL + + CPIC+   L
Sbjct:  582 LKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630

[Close]

BLAST of GR392266 vs. SwissProt
Match: RNF12_MOUSE (E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = -1

Query:  281 LEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 427
            L+ C +C  EY +G  +  L C  E+H  CI +WL + + CPIC+   L
Sbjct:  543 LKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 591

[Close]

BLAST of GR392266 vs. SwissProt
Match: RNF12_HUMAN (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = -1

Query:  281 LEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 427
            L+ C +C  EY +G  +  L C  E+H  CI +WL + + CPIC+   L
Sbjct:  567 LKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 615

[Close]

BLAST of GR392266 vs. SwissProt
Match: RF12B_XENLA (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = -1

Query:  281 LEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 427
            L+ C +C  EY +G  +  L C  E+H  CI +WL + + CPIC+   L
Sbjct:  700 LKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748

[Close]

BLAST of GR392266 vs. SwissProt
Match: RF12A_XENLA (E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = -1

Query:  281 LEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 427
            L+ C +C  EY +G  +  L C  E+H  CI +WL + + CPIC+   L
Sbjct:  565 LKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 613

[Close]

BLAST of GR392266 vs. SwissProt
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.386e-7
Identity = 21/46 (45.65%), Postives = 26/46 (56.52%), Query Frame = -1

Query:  281 CCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 418
            CCIC  EY DG  +  L C   FH +CI +WL   + CP+CK   L
Sbjct:  338 CCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383

[Close]

BLAST of GR392266 vs. SwissProt
Match: DZIP3_HUMAN (E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens GN=DZIP3 PE=1 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 4.386e-7
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = -1

Query:  281 EPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 424
            EPC IC E  +  +N+  L C  +FH+ CI+ WLMQ+  CP C+   L
Sbjct: 1146 EPCVICHENLSP-ENLSVLPCAHKFHAQCIRPWLMQQGTCPTCRLHVL 1192

[Close]

BLAST of GR392266 vs. TrEMBL
Match: Q00M82_SOYBN (Zinc finger protein 2 OS=Glycine max PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.472e-20
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D EPCC+CQE+Y DG +IG+LDCG +FHSSCIKQWLMQKNLCPICKTT L T
Sbjct:  629 DAEPCCVCQEDYGDGNDIGTLDCGHDFHSSCIKQWLMQKNLCPICKTTGLAT 680

[Close]

BLAST of GR392266 vs. TrEMBL
Match: Q00M83_SOYBN (Zinc finger protein 1 OS=Glycine max PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.594e-20
Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D EPCC+CQE+Y DG +IG+LDCG +FHSSCIKQWLM KNLCPICKTT L T
Sbjct:  639 DAEPCCVCQEDYGDGNDIGTLDCGHDFHSSCIKQWLMHKNLCPICKTTGLAT 690

[Close]

BLAST of GR392266 vs. TrEMBL
Match: A5BKN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042276 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.306e-20
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = -1

Query:  245 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT*QGRISPFIS 430
            ++EPCCICQEEY DG++IG+L+CG +FH  CIKQWLM KNLCPICKTTAL      + PF S
Sbjct:  683 EVEPCCICQEEYGDGEDIGTLECGHDFHYGCIKQWLMHKNLCPICKTTALGGCSNLVKPFAS 744

[Close]

BLAST of GR392266 vs. TrEMBL
Match: B9HS22_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_201766 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.628e-19
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            DLEPCCICQEEY DG ++G +DCG +FH++CIKQWLMQKNLCPICK TAL T
Sbjct:  128 DLEPCCICQEEYVDGDDMGIIDCGHDFHANCIKQWLMQKNLCPICKMTALIT 179

[Close]

BLAST of GR392266 vs. TrEMBL
Match: B9GHA7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_847758 PE=4 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.628e-19
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            DLEPCCICQEEY DG ++G +DCG +FH++CIKQWLMQKNLCPICK TAL T
Sbjct:  168 DLEPCCICQEEYVDGDDMGIIDCGHDFHTNCIKQWLMQKNLCPICKMTALLT 219

[Close]

BLAST of GR392266 vs. TrEMBL
Match: Q00M69_SOYBN (Zinc finger protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.736e-19
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D EPCC+CQE+Y D  +IG+LDCG +FHSSCIKQWLM KNLCPICKTT L T
Sbjct:  736 DAEPCCVCQEDYGDEDDIGTLDCGHDFHSSCIKQWLMHKNLCPICKTTGLAT 787

[Close]

BLAST of GR392266 vs. TrEMBL
Match: D7TPG5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031717001 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.185e-19
Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCCICQEEYA G ++G LDCG +FH++CIKQWLMQKNLCPICKTT L T
Sbjct:  108 EVEPCCICQEEYAVGDDLGILDCGHDFHTNCIKQWLMQKNLCPICKTTGLAT 159

[Close]

BLAST of GR392266 vs. TrEMBL
Match: A5BQL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022802 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.185e-19
Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCCICQEEYA G ++G LDCG +FH++CIKQWLMQKNLCPICKTT L T
Sbjct:  502 EVEPCCICQEEYAVGDDLGILDCGHDFHTNCIKQWLMQKNLCPICKTTGLAT 553

[Close]

BLAST of GR392266 vs. TrEMBL
Match: O49500_ARATH (At4g34040 OS=Arabidopsis thaliana GN=AT4g34040 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.078e-19
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D+EPCC+CQEEYA+G ++G+L CG EFH++C+KQWLM KNLCPICKT AL T
Sbjct:  615 DMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALST 666

[Close]

BLAST of GR392266 vs. TrEMBL
Match: D7MFS4_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491267 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.078e-19
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D+EPCC+CQEEYA+G ++G+L CG EFH++C+KQWLM KNLCPICKT AL T
Sbjct:  616 DMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALST 667

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT4G34040.1 (| Symbols: | RING/U-box superfamily protein | chr4:16304638-16307503 REVERSE LENGTH=666)

HSP 1 Score: 96.6709 bits (239), Expect = 5.456e-21
Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D+EPCC+CQEEYA+G ++G+L CG EFH++C+KQWLM KNLCPICKT AL T
Sbjct:  615 DMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKTVALST 666

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT5G42940.1 (| Symbols: | RING/U-box superfamily protein | chr5:17216649-17219171 REVERSE LENGTH=691)

HSP 1 Score: 95.9005 bits (237), Expect = 9.307e-21
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            D EPCC+CQEEY +G+++G+L+CG EFHS CIK+WL QKNLCPICKTT L T
Sbjct:  633 DAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTGLNT 684

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT2G15530.3 (| Symbols: | RING/U-box superfamily protein | chr2:6774150-6777068 FORWARD LENGTH=704)

HSP 1 Score: 93.2041 bits (230), Expect = 6.033e-20
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCCICQEEY +G N+G+L CG EFH  CIKQW+M KNLCPICKT AL T
Sbjct:  652 NIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEALKT 703

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT2G15530.2 (| Symbols: | RING/U-box superfamily protein | chr2:6774150-6777068 FORWARD LENGTH=704)

HSP 1 Score: 93.2041 bits (230), Expect = 6.033e-20
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCCICQEEY +G N+G+L CG EFH  CIKQW+M KNLCPICKT AL T
Sbjct:  652 NIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEALKT 703

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT2G15530.1 (| Symbols: | RING/U-box superfamily protein | chr2:6774150-6777068 FORWARD LENGTH=704)

HSP 1 Score: 93.2041 bits (230), Expect = 6.033e-20
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCCICQEEY +G N+G+L CG EFH  CIKQW+M KNLCPICKT AL T
Sbjct:  652 NIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEALKT 703

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT1G45180.1 (| Symbols: | RING/U-box superfamily protein | chr1:17099335-17101683 FORWARD LENGTH=645)

HSP 1 Score: 90.5077 bits (223), Expect = 3.910e-19
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = -1

Query:  275 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTALPT 430
            ++EPCC+CQEEY + + IG L+CG +FHS CIK+WL QKNLCPICKTT L T
Sbjct:  588 EVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKTTGLNT 639

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT2G15530.4 (| Symbols: | RING/U-box superfamily protein | chr2:6774150-6777899 FORWARD LENGTH=780)

HSP 1 Score: 81.6481 bits (200), Expect = 1.816e-16
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = -1

Query:  299 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPI 430
            ++EPCCICQEEY +G N+G+L CG EFH  CIKQW+M KNLCPI
Sbjct:  652 NIEPCCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPI 695

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT1G53190.2 (| Symbols: | RING/U-box superfamily protein | chr1:19838072-19840003 FORWARD LENGTH=494)

HSP 1 Score: 72.0182 bits (175), Expect = 1.439e-13
Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = -1

Query:  281 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 430
            + EPC ICQE + + + I +LDCG E+H+ C+++WL+ KN+CPICK+ AL
Sbjct:  438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEAL 487

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT1G53190.1 (| Symbols: | RING/U-box superfamily protein | chr1:19838072-19840003 FORWARD LENGTH=494)

HSP 1 Score: 72.0182 bits (175), Expect = 1.439e-13
Identity = 26/50 (52.00%), Postives = 39/50 (78.00%), Query Frame = -1

Query:  281 DLEPCCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTAL 430
            + EPC ICQE + + + I +LDCG E+H+ C+++WL+ KN+CPICK+ AL
Sbjct:  438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEAL 487

[Close]

BLAST of GR392266 vs. TAIR peptide
Match: AT5G24870.2 (| Symbols: | RING/U-box superfamily protein | chr5:8545008-8546923 REVERSE LENGTH=520)

HSP 1 Score: 70.0922 bits (170), Expect = 5.469e-13
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = -1

Query:  284 CCICQEEYADGQNIGSLDCGREFHSSCIKQWLMQKNLCPICKTTA 418
            C ICQEEY DG  +G+L C  ++H SC +QWL  KN CPICKT+A
Sbjct:  468 CSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSA 512

The following BLAST results are available for this feature:

BLAST of GR392266 vs. SwissProt
BLAST of GR392266 vs. TrEMBL
BLAST of GR392266 vs. TAIR peptide

BLAST of GR392266 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RIE1_ARATH	3.967e-8	45.65	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis th...	[more]
RING1_ARATH	8.838e-8	45.65	E3 ubiquitin-protein ligase At1g12760 OS=Arabidops...	[more]
DZIP3_MOUSE	1.969e-7	45.83	E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus ...	[more]
RNF12_XENTR	3.358e-7	38.78	E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropi...	[more]
RNF12_MOUSE	3.358e-7	38.78	E3 ubiquitin-protein ligase RLIM OS=Mus musculus G...	[more]
RNF12_HUMAN	3.358e-7	38.78	E3 ubiquitin-protein ligase RLIM OS=Homo sapiens G...	[more]
RF12B_XENLA	3.358e-7	38.78	E3 ubiquitin-protein ligase RNF12-B OS=Xenopus lae...	[more]
RF12A_XENLA	3.358e-7	38.78	E3 ubiquitin-protein ligase RNF12-A OS=Xenopus lae...	[more]
RING4_ARATH	4.386e-7	45.65	E3 ubiquitin-protein ligase At4g11680 OS=Arabidops...	[more]
DZIP3_HUMAN	4.386e-7	43.75	E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens ...	[more]

BLAST of GR392266 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q00M82_SOYBN	1.472e-20	78.85	Zinc finger protein 2 OS=Glycine max PE=4 SV=1	[more]
Q00M83_SOYBN	5.594e-20	76.92	Zinc finger protein 1 OS=Glycine max PE=4 SV=1	[more]
A5BKN3_VITVI	7.306e-20	66.13	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HS22_POPTR	1.628e-19	76.92	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9GHA7_POPTR	1.628e-19	76.92	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q00M69_SOYBN	4.736e-19	75.00	Zinc finger protein OS=Glycine max PE=4 SV=1	[more]
D7TPG5_VITVI	6.185e-19	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BQL0_VITVI	6.185e-19	75.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
O49500_ARATH	8.078e-19	71.15	At4g34040 OS=Arabidopsis thaliana GN=AT4g34040 PE=...	[more]
D7MFS4_ARALY	8.078e-19	71.15	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]

BLAST of GR392266 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G34040.1	5.456e-21	71.15	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G42940.1	9.307e-21	71.15	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G15530.3	6.033e-20	71.15	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G15530.2	6.033e-20	71.15	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G15530.1	6.033e-20	71.15	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G45180.1	3.910e-19	67.31	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G15530.4	1.816e-16	70.45	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G53190.2	1.439e-13	52.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G53190.1	1.439e-13	52.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G24870.2	5.469e-13	60.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	no description	coord: 8..48 score: 1.4
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 8..49 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 6..51 score: 1.8
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 8..48 score: 7.9
None	No IPR available	PANTHER	PTHR12477	SYNOVIOLIN-RELATED	coord: 6..48 score: 1.6
None	No IPR available	PANTHER	PTHR12477:SF15	UBIQUITIN LIGASE PROTEIN DZIP3	coord: 6..48 score: 1.6
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 7..55 score: 2.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR392266 ID=GR392266; Name=GR392266; organism=Cicer arietinum; type=EST; length=439bp
AAGCGGTCAACGTCTTAAATTTATAATGAAAATTAATAAAATTCAAGTGA
TTTTAGCTATCATAAAGGACATGTAATGGTCCATTATCACAGTATAAATG
TAATAACTCTACTATAGCTTAACCACCAATGTTTCTTGTTTATGTCTATT
TTTTTTATATGTGTTTTCACTCCCAATCTTGACAAATAAAAGGAAGTTCA
TGAAATAAAACAAGTAATAATAAATAGTTCCAGCTAAAGATCAAACTGAT
AAAGGGAGAGATTCTCCCTTGTCACGTCGGCAAGGCTGTTGTTTTGCAAA
TTGGGCACAAATTCTTCTGCATTAGCCACTGCTTGATGCAGCTACTGTGG
AACTCACGACCACAATCTAGTGAACCAATATTCTGTCCATCAGCATATTC
CTCCTGGCAAATACAGCAAGGTTCGAGATCAAAAAAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type

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