GR394602

EST Overview
NameGR394602
Unique NameGR394602
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length535
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394602 vs. TrEMBL
Match: C7FDI6_SOYBN (TNP1 OS=Glycine max PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.940e-14
Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = -1
Query:  188 HWQLLIICPRKNTVVFLCSLGRKPEKDIIHIVDSALGE-CNKLQGIRKK--PIWFVPDCQRQSETYECGYYIMIHMLNIVSAGIVDSWLRIFGNLKSFHDDELKNVRQCCASLIL 523
            HWQL ++CPR+N VV+ CSL +KP+ +I  +++SA+    + L+G+ ++  P W  P    QS  YECGYY+M  M  IVS  + D W R F +  +   + +  +R+  A+  L
Sbjct:  634 HWQLFVLCPRENMVVWFCSLRKKPDVNIKAVINSAMKTISSSLEGMSQQGPPRWIEPKSHVQSGGYECGYYVMHWMWCIVSGRLKDDWNRWFSDGSALDVEAMTIIRKNWATYFL 748          
BLAST of GR394602 vs. TrEMBL
Match: C6T157_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-11
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = -1
Query:  212 NNCHWQLLIICPRKNTVVFLCSLGRKPEKDIIHIVDSAL-GECNKLQGIRKKPI-WFVPDCQRQSETYECGYYIMIHMLNIVSAGIVDSWLRIFGNLKSFHDDELKNVR 532
            N  HWQ+++I P+++ VV+ CSL  +P+  +  I++SA+ G  +  Q   K P  W V  C RQ  T ECGYY+M  M  I+     ++W   F + +    + LK +R
Sbjct:   15 NGGHWQMVVILPKEHLVVWFCSLHNRPDNYLKGIINSAIKGLDDAPQPKSKAPTRWIVVKCNRQKGTTECGYYVMHWMSTIILRTFRNNWEAYFNDPRPLELERLKALR 123          
BLAST of GR394602 vs. TrEMBL
Match: A5C7Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007142 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 7.896e-8
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = -1
Query:  179 HWQLLIICPRKNTVVFLCSLGRKPEKDIIHIVDSALGECNKLQGIRKKPIWFVPDCQRQSETYECGYYIMIHMLNIVSAGIVDSWLRIFGNLKSFHDDELKNVRQCCASLILEYI 523
            HW L++I PRK  V +L  +  KP +D+  IV+ AL    K    +++P W +  C RQ   +ECGY++M  +  I+    + +    FG+ K++   E   +R   A+ +L+ I
Sbjct:  148 HWVLVVIEPRKMIVHYLDPMHHKPCEDLKDIVNMALRMSTKKTS-KREPSWQLVQCPRQEGGFECGYFVMRFIKEIIFYPTIIA--SKFGDKKTYSQVEFDEIRGEWATFVLQLI 259          
The following BLAST results are available for this feature:
BLAST of GR394602 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
C7FDI6_SOYBN1.940e-1437.39TNP1 OS=Glycine max PE=4 SV=1[more]
C6T157_SOYBN9.965e-1134.86Putative uncharacterized protein OS=Glycine max PE... [more]
A5C7Z4_VITVI7.896e-831.30Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003653Peptidase C48, SUMO/Sentrin/Ubl1PFAMPF02902Peptidase_C48coord: 3..87
score: 2.3
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 3..121
score: 6.3

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394602 ID=GR394602; Name=GR394602; organism=Cicer arietinum; type=EST; length=535bp
ACAAATGATAACATCATTGAACTTTTAGTGATTTTCCATTCAAAACCATA
CAATTAATAATATAATTAAGTTAAAGGACCAAAATCATTCGGTTAATTTA
TTACACTAATATAAACAATTTATACCAATAAACAACAATCATGATTACAA
TCCATTATCAAGCATTTTCAATTGTTTGAATATACTCAAGAATCAAACTT
GCACAGCATTGTCTGACGTTTTTAAGTTCATCGTCATGAAATGACTTCAA
ATTTCCAAATATCCGCAACCATGAATCAACAATACCGGCTGATACAATAT
TTAACATATGTATCATAATATAGTAACCACACTCATAAGTCTCTGATTGT
CTTTGGCAATCAGGGACAAACCATATTGGCTTCTTTCTAATACCTTGCAG
CTTATTACATTCACCCAAAGCTGAATCAACAATATGAATGATATCTTTTT
CCGGTTTTCTTCCTAACGAACAGAGGAAGACTACAGTATTCTTCCTAGGA
CAAATAATGAGCAATTGCCAATGACAATTGTTGTA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C