GR394905

EST Overview
NameGR394905
Unique NameGR394905
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length693
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR394905 vs. TrEMBL
Match: O22611_PEA (Dormancy-associated protein OS=Pisum sativum GN=DRM1 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.690e-16
Identity = 35/76 (46.05%), Postives = 43/76 (56.58%), Query Frame = 1
Query:   22 MFQKLWHDIGAGPQPERGLDKVMNLTTYV*DDGCSSHIMRNXXXXXXXXXXXXXXXXXXXLKVDYCWRIMFNPGTN 249
            M  KLW DI AGPQPERGL+K+  LTT + DDG S+ +MR+                    KVD  WR +FNPG+N
Sbjct:    1 MLDKLWDDIVAGPQPERGLEKLRKLTTTLKDDGASNQLMRSTSIPTTPTTPVTPTTPSSARKVDNVWRSVFNPGSN 76          

HSP 2 Score: 40.0466 bits (92), Expect = 2.690e-16
Identity = 20/29 (68.97%), Postives = 20/29 (68.97%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GA VF  PL NTPTVYD MY G TRS  R
Sbjct:   83 GAHVFDKPLPNTPTVYDWMYSGDTRSKHR 111          
BLAST of GR394905 vs. TrEMBL
Match: A6MZ93_9FABA (Dormancy-associated protein/auxin-repressed protein OS=Glycyrrhiza uralensis PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.756e-12
Identity = 31/79 (39.24%), Postives = 40/79 (50.63%), Query Frame = 1
Query:   22 MFQKLWHDIGAGPQPERGLDKVMNLTTYV*DDGCSSHIMRN---XXXXXXXXXXXXXXXXXXXLKVDYCWRIMFNPGTN 249
            M +KLW D+ AGPQPERGL+++  LTT V D+G    + RN                       K D  WR +FNPG+N
Sbjct:    1 MLEKLWDDVVAGPQPERGLERLRKLTTSVKDEGQGIKLQRNPSMPSTPTTPGTPTTPTTPGSARKADNVWRSVFNPGSN 79          

HSP 2 Score: 37.7354 bits (86), Expect = 5.756e-12
Identity = 18/29 (62.07%), Postives = 20/29 (68.97%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GA+ F  PL NTPTVYD +Y G TRS  R
Sbjct:   86 GAEYFDKPLPNTPTVYDWLYSGDTRSKHR 114          
BLAST of GR394905 vs. TrEMBL
Match: A5JSU3_9FABA (Auxin-repressed protein OS=Sesbania drummondii PE=4 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.793e-10
Identity = 33/81 (40.74%), Postives = 43/81 (53.09%), Query Frame = 1
Query:   19 LMFQKLWHDIGAGPQPERGLDKVMNLTTYV*DDG-CSSHIMRNXXXXXXXXXXXXXXXXXXXL---KVDYCWRIMFNPGTN 249
            ++ +KLW DI AGPQPERGL K+  L  +V DDG  SS + RN                   +   KVD  WR +F+PG+N
Sbjct:    2 VLLEKLWDDIVAGPQPERGLGKLRKL--HVKDDGEGSSKLQRNLSMPTTPTTPVTPTTPTTPVSARKVDNVWRSVFHPGSN 80          

HSP 2 Score: 37.7354 bits (86), Expect = 3.793e-10
Identity = 18/29 (62.07%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GAQ+F  PL N+PTVYD +Y G TRS  R
Sbjct:   87 GAQMFDKPLPNSPTVYDWLYSGETRSKHR 115          
BLAST of GR394905 vs. TrEMBL
Match: Q9FNV7_ROBPS (Auxin-repressed protein OS=Robinia pseudoacacia PE=4 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 3.793e-10
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 1
Query:   19 LMFQKLWHDIGAGPQPERGLDKVMNLTTYV*DDGCSSHIMRNXXXXXXXXXXXXXXXXXXXL---KVDYCWRIMFNPGTN 249
            ++ +KLW D+ AGP PERGL K+  L+T V D+G  S ++ N                   L   K D  WR +F+PG+N
Sbjct:    2 VLLEKLWDDVVAGPHPERGLGKLRKLSTNVKDEGEGSKLL-NLSMPSTPTTPVTPTTPTTPLSGRKADNVWRSVFHPGSN 80          

HSP 2 Score: 39.2762 bits (90), Expect = 3.793e-10
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GAQ+F  PL NTPTVYD +Y G TRS  R
Sbjct:   87 GAQMFDKPLPNTPTVYDWLYSGETRSKHR 115          
BLAST of GR394905 vs. TrEMBL
Match: C6TKV0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 4.927e-10
Identity = 29/81 (35.80%), Postives = 40/81 (49.38%), Query Frame = 1
Query:   19 LMFQKLWHDIGAGPQPERGLDKVMNLTTY-V*DDGCSSHIMRN---XXXXXXXXXXXXXXXXXXXLKVDYCWRIMFNPGTN 249
            ++ +KLW D+ AGPQPERGL K+  LTT    D+G SS + +                        K D  WR +F+PG+N
Sbjct:    2 VLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSN 82          

HSP 2 Score: 39.2762 bits (90), Expect = 4.927e-10
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GAQ+F  PL NTPTVYD +Y G TRS  R
Sbjct:   89 GAQMFDKPLPNTPTVYDWLYSGETRSRHR 117          
BLAST of GR394905 vs. TrEMBL
Match: C6SVK9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.821e-9
Identity = 28/81 (34.57%), Postives = 40/81 (49.38%), Query Frame = 1
Query:   19 LMFQKLWHDIGAGPQPERGLDKVMNLTTY-V*DDGCSSHIMRN---XXXXXXXXXXXXXXXXXXXLKVDYCWRIMFNPGTN 249
            ++ +KLW D+ AGP+PERGL K+  LTT    D+G SS + +                        K D  WR +F+PG+N
Sbjct:    2 VLLEKLWDDVVAGPRPERGLGKLRKLTTLKTIDEGESSKLQKTLSMPSTPTTPMTPTTPTTPGSARKADNVWRSVFHPGSN 82          

HSP 2 Score: 39.2762 bits (90), Expect = 1.821e-9
Identity = 19/29 (65.52%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GAQ+F  PL NTPTVYD +Y G TRS  R
Sbjct:   89 GAQMFDKPLPNTPTVYDWLYSGETRSRHR 117          
BLAST of GR394905 vs. TrEMBL
Match: D1MWZ6_CITLA (Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris GN=CitAuR PE=4 SV=1)

HSP 1 Score: 43.8986 bits (102), Expect = 4.370e-7
Identity = 28/84 (33.33%), Postives = 40/84 (47.62%), Query Frame = 1
Query:   19 LMFQKLWHDIGAGPQPERGLDKVMNLTT--YV*DD--GCSSHIMRNXXXXXXXXXXXXXXXXXXXL---KVDYCWRIMFNPGTN 249
            ++ +KLW D+ AGPQP+RGL K+  +TT  ++  D  G  S   R+                   L   + D  WR +FNPG N
Sbjct:    2 VLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTPVTPTTPLTAARKDNVWRSVFNPGRN 85          

HSP 2 Score: 35.039 bits (79), Expect = 4.370e-7
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 3
Query:  270 GAQVFYLPLSNTPTVYD*MYIGGTRSMTR 356
            GA+VF  P  N+PTVYD +Y G T+S  R
Sbjct:   92 GAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120          
The following BLAST results are available for this feature:
BLAST of GR394905 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
O22611_PEA2.690e-1646.05Dormancy-associated protein OS=Pisum sativum GN=DR... [more]
A6MZ93_9FABA5.756e-1239.24Dormancy-associated protein/auxin-repressed protei... [more]
A5JSU3_9FABA3.793e-1040.74Auxin-repressed protein OS=Sesbania drummondii PE=... [more]
Q9FNV7_ROBPS3.793e-1036.25Auxin-repressed protein OS=Robinia pseudoacacia PE... [more]
C6TKV0_SOYBN4.927e-1035.80Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVK9_SOYBN1.821e-934.57Putative uncharacterized protein OS=Glycine max PE... [more]
D1MWZ6_CITLA4.370e-733.33Auxin-repressed protein OS=Citrullus lanatus subsp... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394905 ID=GR394905; Name=GR394905; organism=Cicer arietinum; type=EST; length=693bp
ATTTCACCCAAGTGTTTTTTAATGTTTCAGAAACTTTGGCATGATATTGG
TGCTGGCCCTCAACCTGAACGAGGCCTTGACAAGGTCATGAATCTCACCA
CCTACGTCTGAGATGACGGATGTAGTAGCCATATAATGAGGAACTCTTCT
CTGCCTTCAACATCTACGACCCCTTGGACTGCGTAAACACCTCCTTCTTC
ACTAAAAGTTGACTACTGTTGGAGGATCATGTTCAATCCTGGGACAAACT
GCATCCATTAGAACAAACTGGTGCTCAAGTTTTTTACTTACCACTCTCAA
ACACCCCCACTGTATATGATTGAATGTATATCGGTGGTACAAGGAGCATG
ACCCGTTATCTGATGTGGTACCAAATTTCCCCTCTGTTGTATGAAAATAT
TTCTCCTGTTTTCTTGCATAACTGCTACGAGTTTATTACTTTATTGTTCT
CTTGTAAGATTGACCAGAGTGTTTGTTTTTCTAATATTACCATCTGCATC
TTAATGTAATATGCTTTCATTTTAGTATGCTTAAATACTTTTTTAAATTT
TAAAATTTGTTTTAAGGTACTTCTCTAAACTTATCTATTTTTTTTATCTC
TTATTTCGCTATGTCATGAGTATAAATAAAAATTTACCCTAATACTTCTC
ATATTTTATTTTGGAGCTCTTTTTTACCATTTTCCTATTTTGC
back to top