GR403012

EST Overview


Name	GR403012
Unique Name	GR403012
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	591

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of GR403012 vs. SwissProt
Match: RL172_ARATH (60S ribosomal protein L17-2 OS=Arabidopsis thaliana GN=RPL17B PE=2 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 3.897e-66
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQA 590
            RKLPL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVDAL++SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KEPE QLA   KKS A
Sbjct:   37 RKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKKSAA 175

[Close]

BLAST of GR403012 vs. SwissProt
Match: RL171_ARATH (60S ribosomal protein L17-1 OS=Arabidopsis thaliana GN=RPL17A PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.934e-65
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = -2

Query:  183 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKK 590
            RKLPL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVDAL++SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KEPE QLA   KK
Sbjct:   37 RKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKK 172

[Close]

BLAST of GR403012 vs. SwissProt
Match: RL17_MAIZE (60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.033e-63
Identity = 116/135 (85.93%), Postives = 127/135 (94.07%), Query Frame = -2

Query:  186 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKK 590
            RKLPLTKAKRYLEDV+AHKQAIPFRR+C GVGRTAQAK+RHSNGQGRWP+KSA+FILDLLKNAESNA+VKGLDVD LYVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE +  +A  K+
Sbjct:   37 RKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 171

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BLAST of GR403012 vs. SwissProt
Match: RL171_HORVU (60S ribosomal protein L17-1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.533e-62
Identity = 114/131 (87.02%), Postives = 122/131 (93.13%), Query Frame = -2

Query:  198 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLA 590
            RK+PL KAKRYLEDVLAHKQAIPFRR+CRGVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVDALY+SH+QVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KE E  +A
Sbjct:   37 RKMPLNKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]

BLAST of GR403012 vs. SwissProt
Match: RL172_HORVU (60S ribosomal protein L17-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.873e-60
Identity = 111/134 (82.84%), Postives = 122/134 (91.04%), Query Frame = -2

Query:  189 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK 590
            R++PL KAKRYLEDVLAHKQAIPFRR+CRGVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD LY+SH+QVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KE +  +A  K
Sbjct:   37 RRMPLGKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

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BLAST of GR403012 vs. SwissProt
Match: RL17_PODCA (60S ribosomal protein L17 OS=Podocoryne carnea GN=RPL17 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.904e-45
Identity = 91/140 (65.00%), Postives = 111/140 (79.29%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQK-EPEFQLATNKKKSQA 590
            +K+ + KA RYL+DV+A KQ IPFRRFC GVGR AQAK    + QGRWP+KSA+F+L LLKNAESNA+VKGLDVD+L + H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+I+SEKE+ V + E E ++    KK  A
Sbjct:   37 KKMHIRKAYRYLKDVIAKKQIIPFRRFCGGVGRKAQAK-AFKHTQGRWPVKSAEFLLGLLKNAESNADVKGLDVDSLVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEMIVSEKEQVVPRAEEEVEVKKVSKKKLA 175

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BLAST of GR403012 vs. SwissProt
Match: RL17_HUMAN (60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 7.907e-43
Identity = 88/134 (65.67%), Postives = 107/134 (79.85%), Query Frame = -2

Query:  177 LTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQ 578
            + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K PE ++A  KK SQ
Sbjct:   41 IRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKKISQ 172

[Close]

BLAST of GR403012 vs. SwissProt
Match: RL17_FELCA (60S ribosomal protein L17 OS=Felis catus GN=RPL17 PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 7.907e-43
Identity = 88/134 (65.67%), Postives = 107/134 (79.85%), Query Frame = -2

Query:  177 LTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQ 578
            + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K PE ++A  KK SQ
Sbjct:   41 IRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKKISQ 172

[Close]

BLAST of GR403012 vs. SwissProt
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.033e-42
Identity = 88/134 (65.67%), Postives = 107/134 (79.85%), Query Frame = -2

Query:  177 LTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQ 578
            + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K PE ++A  KK SQ
Sbjct:   41 IRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKKISQ 172

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BLAST of GR403012 vs. SwissProt
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.033e-42
Identity = 88/134 (65.67%), Postives = 107/134 (79.85%), Query Frame = -2

Query:  177 LTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQ 578
            + KA +YL+DV   KQ +PFRR+  GVGR AQAK +    QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L + H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+IL+EKE+ V K PE ++A  KK SQ
Sbjct:   41 IRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAK-QWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKKKISQ 172

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BLAST of GR403012 vs. TrEMBL
Match: B9RMF8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1080700 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.048e-68
Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK--KKSQAL 590
            RKLPLTKAKRYLEDV+AHKQAIPFRRFC GVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNAEVKGLDVDALY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELIL+EKEEAV+KEPE QLAT+   KKSQAL
Sbjct:  939 RKLPLTKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILAEKEEAVRKEPETQLATSNKPKKSQAL 1080

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BLAST of GR403012 vs. TrEMBL
Match: C6SWG9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.369e-68
Identity = 130/140 (92.86%), Postives = 136/140 (97.14%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQAL 590
            RKLPL KAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNAEVKGLDVDALY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KEPE +LAT+ KKSQAL
Sbjct:   37 RKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLATS-KKSQAL 175

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BLAST of GR403012 vs. TrEMBL
Match: C6SXK1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.870e-68
Identity = 128/140 (91.43%), Postives = 135/140 (96.43%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQAL 590
            RKLPL KAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNAEVKGLDVDALY++H+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KEPE +L T+ KKSQAL
Sbjct:   37 RKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETKLTTS-KKSQAL 175

[Close]

BLAST of GR403012 vs. TrEMBL
Match: C6SWL4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.581e-67
Identity = 126/136 (92.65%), Postives = 131/136 (96.32%), Query Frame = -2

Query:  183 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKK 590
            RKLPL KAKRYLEDVLAHKQAIPFRRFC GVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNAEVKGLDVDALY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KE E QLAT+KKK
Sbjct:   37 RKLPLVKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEAETQLATSKKK 172

[Close]

BLAST of GR403012 vs. TrEMBL
Match: D7SGX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008528001 PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.807e-67
Identity = 127/141 (90.07%), Postives = 135/141 (95.74%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK-KKSQAL 590
            RKL LTKAKRYLEDVLAHKQAIPF+RFCRGVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNA++KGLDVD+LYVSH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VQKEP+ QLA  K KK+QAL
Sbjct:   63 RKLRLTKAKRYLEDVLAHKQAIPFQRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVQKEPDTQLAPRKTKKTQAL 203

[Close]

BLAST of GR403012 vs. TrEMBL
Match: A9PJV5_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.807e-67
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK-KKSQA 590
            RKLPL KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAKNRHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY++H+QVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEPE QLAT+K KKSQA
Sbjct:   37 RKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSKKSQA 176

[Close]

BLAST of GR403012 vs. TrEMBL
Match: A9PA96_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.807e-67
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK-KKSQA 590
            RKLPL KAKRYLEDV+AHKQAIPFRRFC GVGRTAQAKNRHSNGQGRWP KSAKFILDLLKNAESNAEVKGLDVDALY++H+QVNQAQKQRRRTYRAHGRINPYMSSPCHIEL LSEKEE V+KEPE QLAT+K KKSQA
Sbjct:   37 RKLPLVKAKRYLEDVMAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPAKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATSKSKKSQA 176

[Close]

BLAST of GR403012 vs. TrEMBL
Match: A5B412_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011749 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.673e-66
Identity = 125/141 (88.65%), Postives = 134/141 (95.04%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK-KKSQAL 590
            RKLPL KAKRYLEDVL HKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNA++KGLDVD+LY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KEPE QLAT+K KKS A+
Sbjct:   37 RKLPLAKAKRYLEDVLVHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSHAV 177

[Close]

BLAST of GR403012 vs. TrEMBL
Match: D7TAV7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010450001 PE=4 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.727e-66
Identity = 122/136 (89.71%), Postives = 129/136 (94.85%), Query Frame = -2

Query:  183 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKK 590
            RKLPL KAKRYLEDVL HKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP+KSAKFILDLLKNAESNA++KGLDVD+LY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KEPE QLAT K K
Sbjct:   70 RKLPLAKAKRYLEDVLVHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKSK 205

[Close]

BLAST of GR403012 vs. TrEMBL
Match: D7TAV6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010449001 PE=4 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.727e-66
Identity = 124/141 (87.94%), Postives = 134/141 (95.04%), Query Frame = -2

Query:  171 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNK-KKSQAL 590
            RKLPL KAKRYLEDVL HKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP+KSAK+ILDLLKNAESNA++KGLDVD+LY+SH+QVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE V+KEPE QLAT+K KKS A+
Sbjct:   58 RKLPLAKAKRYLEDVLVHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPVKSAKYILDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSHAV 198

[Close]

BLAST of GR403012 vs. TAIR peptide
Match: AT1G67430.1 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:25262209-25263627 FORWARD LENGTH=175)

HSP 1 Score: 250.751 bits (639), Expect = 4.099e-67
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQA 590
            RKLPL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVDAL++SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KEPE QLA   KKS A
Sbjct:   37 RKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKKSAA 175

[Close]

BLAST of GR403012 vs. TAIR peptide
Match: AT1G27400.1 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:9515230-9516725 FORWARD LENGTH=176)

HSP 1 Score: 248.44 bits (633), Expect = 2.035e-66
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = -2

Query:  183 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKK 590
            RKLPL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVDAL++SH+QVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEE V+KEPE QLA   KK
Sbjct:   37 RKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSKK 172

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BLAST of GR403012 vs. TAIR peptide
Match: AT1G67430.2 (| Symbols: | Ribosomal protein L22p/L17e family protein | chr1:25262209-25263627 FORWARD LENGTH=131)

HSP 1 Score: 145.206 bits (365), Expect = 2.426e-35
Identity = 82/139 (58.99%), Postives = 86/139 (61.87%), Query Frame = -2

Query:  174 RKLPLTKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPIKSAKFILDLLKNAESNAEVKGLDVDALYVSHVQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVQKEPEFQLATNKKKSQA 590
            RKLPL KAKRYLEDV+AHKQAIPF RFCRGVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNA                                            ELILSEKEE V+KEPE QLA   KKS A
Sbjct:   37 RKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNA--------------------------------------------ELILSEKEEPVKKEPETQLAAKSKKSAA 131

The following BLAST results are available for this feature:

BLAST of GR403012 vs. SwissProt
BLAST of GR403012 vs. TrEMBL
BLAST of GR403012 vs. TAIR peptide

BLAST of GR403012 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL172_ARATH	3.897e-66	87.05	60S ribosomal protein L17-2 OS=Arabidopsis thalian...	[more]
RL171_ARATH	1.934e-65	87.50	60S ribosomal protein L17-1 OS=Arabidopsis thalian...	[more]
RL17_MAIZE	4.033e-63	85.93	60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=...	[more]
RL171_HORVU	1.533e-62	87.02	60S ribosomal protein L17-1 OS=Hordeum vulgare PE=...	[more]
RL172_HORVU	1.873e-60	82.84	60S ribosomal protein L17-2 OS=Hordeum vulgare PE=...	[more]
RL17_PODCA	2.904e-45	65.00	60S ribosomal protein L17 OS=Podocoryne carnea GN=...	[more]
RL17_HUMAN	7.907e-43	65.67	60S ribosomal protein L17 OS=Homo sapiens GN=RPL17...	[more]
RL17_FELCA	7.907e-43	65.67	60S ribosomal protein L17 OS=Felis catus GN=RPL17 ...	[more]
RL17_RAT	1.033e-42	65.67	60S ribosomal protein L17 OS=Rattus norvegicus GN=...	[more]
RL17_MOUSE	1.033e-42	65.67	60S ribosomal protein L17 OS=Mus musculus GN=Rpl17...	[more]

BLAST of GR403012 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RMF8_RICCO	1.048e-68	91.55	Putative uncharacterized protein OS=Ricinus commun...	[more]
C6SWG9_SOYBN	1.369e-68	92.86	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXK1_SOYBN	8.870e-68	91.43	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SWL4_SOYBN	2.581e-67	92.65	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SGX3_VITVI	9.807e-67	90.07	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9PJV5_9ROSI	9.807e-67	90.71	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PA96_POPTR	9.807e-67	90.71	Putative uncharacterized protein OS=Populus tricho...	[more]
A5B412_VITVI	1.673e-66	88.65	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7TAV7_VITVI	3.727e-66	89.71	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7TAV6_VITVI	3.727e-66	87.94	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GR403012 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G67430.1	4.099e-67	87.05	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]
AT1G27400.1	2.035e-66	87.50	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]
AT1G67430.2	2.426e-35	58.99	\| Symbols: \| Ribosomal protein L22p/L17e family p...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10010	SODIUM-DEPENDENT PHOSPHATE TRANSPORTER-RELATED	coord: 1..53 score: 5.1
None	No IPR available	PANTHER	PTHR10010:SF4	SODIUM-DEPENDENT PHOSPHATE TRANSPORTER SLC34A1-RELATED	coord: 1..53 score: 5.1
IPR001063	Ribosomal protein L22/L17	GENE3D	3.90.470.10	no description	coord: 1..121 score: 9
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 1..117 score: 4.3
IPR001063	Ribosomal protein L22/L17	SUPERFAMILY	54843	Ribosomal protein L22	coord: 1..118 score: 4.6
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	PANTHER	PTHR11593	60S RIBOSOMAL PROTEIN L17	coord: 1..139 score: 8.1
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	TIGRFAMs	TIGR01038	L22_arch: ribosomal protein L22	coord: 1..118 score: 4.8
IPR018260	Ribosomal protein L22/L17, conserved site	PROSITE	PS00464	RIBOSOMAL_L22	coord: 91..115 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR403012 ID=GR403012; Name=GR403012; organism=Cicer arietinum; type=EST; length=591bp
GATGCAATTACCATTGTATAGGAAACAAAAACTGCCGCTGCTCAGAATTC
AAAAACAGCTCATAACAAACATAAGGGAAATAAGGGAAAGAGTGCTACTT
CAAACAGCTCATAAACTAAAAAATTAGGGCCTCAACTATAAGATCCAATT
TATGATGAAGCACCACTTCAAAGAGCTTGAGACTTCTTCTTGTTGGTTGC
CAACTGAAACTCGGGCTCTTTCTGGACAGCTTCTTCCTTCTCAGATAAAA
TCAGTTCAATGTGGCATGGAGATGACATGTAGGGATTGATTCTTCCATGA
GCACGGTATGTCCGACGTCTTTGCTTCTGAGCTTGGTTGACCTGGACATG
AGAAACGTAAAGAGCATCGACATCCAAACCTTTCACTTCAGCATTACTCT
CGGCATTCTTAAGCAAATCAAGAATGAATTTAGCTGACTTGATAGGCCAG
CGTCCTTGCCCATTAGAATGTCTGTTCTTAGCTTGGGCAGTCCTTCCAAC
ACCACGACAAAAGCGTCTGAAAGGAATGGCCTGTTTGTGGGCCAAAACAT
CTTCCAAATATCTTTTTGCTTTTGTCAATGGCAACTTCCTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001063	Ribosomal_uL22
IPR005721	Ribosomal_uL22_euk/arc
IPR018260	Ribosomal_L22/L17_CS

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