GR420473

EST Overview
NameGR420473
Unique NameGR420473
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length485
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR420473 vs. TrEMBL
Match: Q39449_CICAR (Specific tissue protein 1 OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.109e-31
Identity = 88/143 (61.54%), Postives = 90/143 (62.94%), Query Frame = -1 
Query:  129 NSEFEPRPNYL*NVTK--------KKSRVNSDMTAVIIKMFEPRPSVTRYDDGSYKSGKLYVGQALQSVEFEP-----KYGGDDYKMVKLPVNSEFEPRPSVTKYDGH-----------EFEPRPL*K*EVACE*RSATKYNE 485
            NSEFEPRP+    VTK        KKSRVNS+        FEPRPSVTRYDDGSYKSGKLYV     SVEFEP     KYGGDDYKMVKLPVNSEFEPRPS TKYDGH           EFEPRP           SATKYNE
Sbjct:  198 NSEFEPRPS----VTKYDGGDYKNKKSRVNSE--------FEPRPSVTRYDDGSYKSGKLYV-----SVEFEPRPSVTKYGGDDYKMVKLPVNSEFEPRPSATKYDGHDYKNKKLHVNEEFEPRP-----------SATKYNE 312

HSP 2 Score: 115.931 bits (289), Expect = 1.313e-24
Identity = 68/116 (58.62%), Postives = 73/116 (62.93%), Query Frame = -1 
Query:  183 SEFEPRPNYL*NVTKKKSRVNSDMTAVIIKMFEPRPSVTRYDDGSYKSGKLYVGQALQSVEFEP-----KYGGDDYKMVKLPVNSEFEPRPSVTKYDG-----------HEFEPRP 482
            SEFEPRP+    VTK       +  + +   FEPRPSVTRYDDGSYK+GKLYV     S EFEP     KY GD YKM KLPVNSEFEPRPSVTKYDG            EFEPRP
Sbjct:  124 SEFEPRPS----VTKYDGDYYKNKKSQLNDEFEPRPSVTRYDDGSYKNGKLYV-----SAEFEPRPSATKYDGDGYKMAKLPVNSEFEPRPSVTKYDGGDYKNKKSRVNSEFEPRP 230
The following BLAST results are available for this feature:
BLAST of GR420473 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q39449_CICAR1.109e-3161.54Specific tissue protein 1 OS=Cicer arietinum PE=2 ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF10950DUF2775coord: 4..81
score: 4.3

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420473 ID=GR420473; Name=GR420473; organism=Cicer arietinum; type=EST; length=485bp
GACAATATTTAACATATTTAATCACCCATTACACTATTAAGACTATACAA
CCATTGGATCACACTTAAACCAAAACATCACATCAAAGTTTTTCTCTTAT
GGCAATCTCACAGTCTTCTATTTCATTACTCATTATATTTTGTGGCGCTT
CTTCATTCACATGCAACTTCTTATTTTTATAATGGTCTAGGTTCGAACTC
ATGACCGTCATACTTTGTAACACTTGGTCTAGGTTCAAACTCACTATTTA
CTGGTAGTTTCACCATTTTATAATCATCACCGCCATACTTAGGTTCAAAT
TCAACGCTTTGTAACGCTTGGCCCACATACAACTTCCCACTTTTATAACT
ACCATCATCGTACCTTGTGACGCTTGGCCTAGGTTCAAACATTTTTATAA
TCACCGCCGTCATATCACTATTCACTCGTGACTTCTTTTTTGTAACATTT
TACAGGTAGTTTGGCCTAGGTTCAAATTCACTATT
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