HO062178

EST Overview
NameHO062178
Unique NameHO062178
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length570
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062178 vs. TrEMBL
Match: C6T2Q7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.958e-18
Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = -2
Query:  216 ERNLFGGFGRFLEAAEEMKNGFFDVIAKSPPIFDVESSFSSPMRRGIPIEEYGRQETHPRSKDMESTDTDFTALAKDV 449
            ERNL  G   F +AA    NGFFDV +KSP IFD ESS S  +RRGIPIEEY R E +P+SK+ ES DTDF A+AKDV
Sbjct:  110 ERNLLSGLSHFFDAA----NGFFDVFSKSPSIFDAESS-SPSVRRGIPIEEYRRPEAYPKSKEKESGDTDFVAMAKDV 182          

HSP 2 Score: 23.0978 bits (48), Expect = 3.958e-18
Identity = 12/22 (54.55%), Postives = 16/22 (72.73%), Query Frame = -3
Query:  458 PNSSSD--HGVFEFPWVRSDIE 517
            P SSSD   GV +FP +++DIE
Sbjct:   86 PFSSSDGASGVVDFPGLQNDIE 107          
BLAST of HO062178 vs. TrEMBL
Match: D7U8T1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_32.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022605001 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.128e-13
Identity = 45/81 (55.56%), Postives = 51/81 (62.96%), Query Frame = -2
Query:  216 ERNLFGGFGRFLEAAEEMKNGFFDVIAKSPPIFDVESSFSSPMRRGIPIEEYGRQETHPRSKD---MESTDTDFTALAKDV 449
            ERNLFGG  RF EAAEEMKNGFF V   +PP+FD ESS SS  RRGIP E  G   T   S +    ES   D + LA++V
Sbjct:  117 ERNLFGGLNRFFEAAEEMKNGFFSVFG-APPVFDGESSSSSSTRRGIPFE--GSNPTKEASAEPFKAESGYGDLSGLAREV 194          

HSP 2 Score: 24.2534 bits (51), Expect = 3.128e-13
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = -3
Query:  455 PNSSSDHGVFEFPWVRSDIES 517
            P    + G F+FP +RSDIE+
Sbjct:   95 PLGLPEQGHFDFPGLRSDIEA 115          
BLAST of HO062178 vs. TrEMBL
Match: B9IIH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825164 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.461e-10
Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = -2
Query:  216 ERNLFGGFGRFLEAAEEMKNGFFDVIAKSPPIFDVESSFSSPMRRGIPIEEYGRQETHPRSKDMESTDTDFTALAKDV 449
            ER+  GG  RF EAAEEMKN FFDV        +  SS S   RRGIP+E +   E  P+ K+  S D D + LA+DV
Sbjct:  115 ERHFLGGINRFFEAAEEMKNNFFDVFG---DFHNGNSSSSPSKRRGIPVEGHPLTEASPKPKEPNSGDVDLSGLARDV 189          
BLAST of HO062178 vs. TrEMBL
Match: B9SDM1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0422060 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.928e-9
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = -2
Query:  216 ERNLFGGFGRFLEAAEEMKNGFFDVIAKSPPIFDVESSFSSPMRRGIPIEEYGRQETHPRSKDMESTDTDFTALAKDV 449
            ER+  GG GR  EAAE+M++  F    +       E+S  SP R GIPIE+Y R+E  P++++ E  + D + LAKDV
Sbjct:  128 ERHFLGGIGRLFEAAEQMRSSIFYTFGE----LYKENSSPSPSR-GIPIEDYSRREASPKARETEPGNVDLSGLAKDV 200          

HSP 2 Score: 24.2534 bits (51), Expect = 2.928e-9
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -3
Query:  458 STLGHPNSSSDHGVFEFPWVRSDIE 532
            STLG      D+  F+FP +RSDIE
Sbjct:  105 STLG----KFDNSPFDFPGLRSDIE 125          
BLAST of HO062178 vs. TrEMBL
Match: Q6X182_MALDO (Mal d 1-associated protein OS=Malus domestica GN=mdap PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.422e-9
Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = -2
Query:  216 ERNLFGGFGRFLEAAEEMKNGFFDVIAKSPPIFDV-ESSFSSPMRRGIPIEEYGRQETHPR-SKDMESTDTDFTALAKDV 449
            ERN  GG  RF EAAEE+K+GFF        IFD   SS   P RR +PIE + +QE  P+ S   +S   D + LA++V
Sbjct:  114 ERNFMGGLSRFFEAAEELKSGFFSAFGN---IFDEGPSSPLPPRRREVPIEGHHQQEAFPKASGSDDSGHVDLSGLAREV 190          

HSP 2 Score: 26.1794 bits (56), Expect = 6.422e-9
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = -3
Query:  458 SSDHGVFEFPWVRSDIE 508
            SS HG  +FP +R DIE
Sbjct:   95 SSQHGALDFPGLRGDIE 111          
The following BLAST results are available for this feature:
BLAST of HO062178 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
C6T2Q7_SOYBN3.958e-1862.82Putative uncharacterized protein OS=Glycine max PE... [more]
D7U8T1_VITVI3.128e-1355.56Whole genome shotgun sequence of line PN40024, sca... [more]
B9IIH8_POPTR3.461e-1047.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SDM1_RICCO2.928e-942.31Putative uncharacterized protein OS=Ricinus commun... [more]
Q6X182_MALDO6.422e-945.00Mal d 1-associated protein OS=Malus domestica GN=m... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 41..58
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062178 ID=HO062178; Name=HO062178; organism=Cicer arietinum; type=EST; length=570bp
ACCTAACCATTGAATTGACCAAAAATAAGATGGCCATTCATGGCAAAAAA
TAGAACTTGGTAACATGGCCCATCAGCCAGAGTTATAAAAAAAAATATCA
AACAACTGGCAAAAAGATACCGAAAAACATCATATTAAAGGACATACATG
TAATTCAAATGTTCGTGATCCAACAAAAACTAATAAAAATATATTAATCA
TGACGCTTTAATTTAAACATCTTTAGCCAATGCAGTGAAATCAGTATCCG
TTGATTCCATATCCTTGGATCTAGGATGAGTTTCTTGCCGGCCATACTCT
TCAATAGGGATCCCTCGCCTCATAGGGGATGAAAATGATGACTCTACATC
AAATATAGGTGGAGACTTTGCAATAACATCAAAAAAGCCATTTTTCATTT
CTTCAGCTGCTTCAAGGAAGCGACCAAAACCACCAAAGAGGTTGCGTTCC
CTTGACTTTCAATATCACTTCGCACCCAGGGAAATTCAAACACCCCATGG
TCTGATGAGCTGTTTGGATGACCCAATGTGGAAAACTACCTCTAAGTACC
TGCCGGGGGCCGCTCGAATC
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