HO062439

EST Overview
NameHO062439
Unique NameHO062439
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length647
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of HO062439 vs. TrEMBL
Match: B9S2P3_RICCO (2-oxoisovalerate dehydrogenase, putative OS=Ricinus communis GN=RCOM_0559760 PE=4 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 8.175e-10
Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = -3
Query:  292 VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCSEML*KNKDQF*LRL*LIE-----*EHHSTSDDPPKYRSTGGD*YWK*KRS 576
            +FI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  +   +  +  ++     R  L+E       HHSTSDD  KYR      YWK  R+
Sbjct:  197 IFICRNNGWAISTHISEQFRSDGIVVKGKAYGIQSIRVDGNDALAVYRTIRAARQIAVSEQ----RPVLVEALTYRVGHHSTSDDSTKYRPADEIEYWKMARN 295          

HSP 2 Score: 40.817 bits (94), Expect = 8.175e-10
Identity = 22/54 (40.74%), Postives = 27/54 (50.00%), Query Frame = -1
Query:  177 RDPCE*FQKWVKRIGWWS-------------TTMHAIQGAGKPKNPLLGDSFND 299
            R+P   F+KWV+R GWWS               + AIQ A K + P LGD F D
Sbjct:  294 RNPVNRFRKWVERNGWWSDKEESELRSSVRKQLLQAIQVAEKTEKPPLGDMFTD 347          
BLAST of HO062439 vs. TrEMBL
Match: Q9LPL5_ARATH (Branched-chain alpha keto-acid dehydrogenase E1-alpha subunit OS=Arabidopsis thaliana GN=At1g21400 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.301e-9
Identity = 45/116 (38.79%), Postives = 58/116 (50.00%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS-EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHAG   + ++    VFI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  +   + EM    +    + +      HHSTSDD  KYR+     YWK  R+
Sbjct:  272 GDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVRSAREMAVTEQRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRN 387          

HSP 2 Score: 32.3426 bits (72), Expect = 2.301e-9
Identity = 19/54 (35.19%), Postives = 25/54 (46.30%), Query Frame = -1
Query:  177 RDPCE*FQKWVKRIGWWS-------------TTMHAIQGAGKPKNPLLGDSFND 299
            R+P   F+KWV+  GWWS               + AIQ A K +   L + FND
Sbjct:  386 RNPVNRFRKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFND 439          
BLAST of HO062439 vs. TrEMBL
Match: D7KK08_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_313033 PE=4 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 5.026e-9
Identity = 45/116 (38.79%), Postives = 57/116 (49.14%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS-EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHAG   + ++    VFI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  +   + EM    +    +        HHSTSDD  KYR+     YWK  R+
Sbjct:  272 GDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYTAVRSAREMAVTEQRPVLIEAMTYRVGHHSTSDDSTKYRAADEIQYWKMSRN 387          

HSP 2 Score: 32.3426 bits (72), Expect = 5.026e-9
Identity = 19/54 (35.19%), Postives = 25/54 (46.30%), Query Frame = -1
Query:  177 RDPCE*FQKWVKRIGWWS-------------TTMHAIQGAGKPKNPLLGDSFND 299
            R+P   F+KWV+  GWWS               + AIQ A K +   L + FND
Sbjct:  386 RNPVNRFRKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFND 439          
BLAST of HO062439 vs. TrEMBL
Match: B5LAT3_CAPAN (Putative branched-chain alpha-keto acid dehydrogenase E1 alpha subunit OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.706e-7
Identity = 62/193 (32.12%), Postives = 85/193 (44.04%), Query Frame = -3
Query:  103 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCSEML*KNKDQ-F*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRSL*VISK--MGKKNWLVEYDHACNSRGGKAQ------------KPFTWGQF**FFAQLSSTPGEQERILRKPLKSFPK 618
            G FHAG   + ++    +FI RNNGW  S P  +  RSDG+    L   I SIRVDGND   +  +   +  +  N+ +   +        HHSTSDD  KYR      YWK  R+   I K  + +  W  E   +  +R  K Q            KP     F   + Q+     EQER +R  +K +PK
Sbjct:  262 GDFHAGLNFAAVMEAPVIFICRNNGWAISTPVHEQFRSDGVVAKGLGYGIRSIRVDGNDVIAVYSAIGAARNMAINEGRPILVEAMTYRVGHHSTSDDSTKYRPMNEIEYWKTARNPISIFKKYIERYGWWSEDKESELARNVKKQVLEAIKTAEGMEKPALTEMFTDVYDQMPPNLYEQERSIRDSMKKYPK 454          
BLAST of HO062439 vs. TrEMBL
Match: Q3E8Q6_ARATH (Putative uncharacterized protein At5g34780.1 OS=Arabidopsis thaliana GN=At5g34780 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.482e-7
Identity = 48/117 (41.03%), Postives = 60/117 (51.28%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS--EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHAG   + ++    VFI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  S  CS  EM    +    + + +    HHSTSDD  KYR+     YWK  R+
Sbjct:   42 GDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAV-YSAVCSAREMAVTEQRPVLIEMMIYRVGHHSTSDDSTKYRAADEIQYWKMSRN 157          
BLAST of HO062439 vs. TAIR peptide
Match: AT1G21400.1 (| Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr1:7493492-7496240 FORWARD LENGTH=472)

HSP 1 Score: 53.9138 bits (128), Expect = 1.608e-11
Identity = 45/116 (38.79%), Postives = 58/116 (50.00%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS-EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHAG   + ++    VFI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  +   + EM    +    + +      HHSTSDD  KYR+     YWK  R+
Sbjct:  272 GDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVRSAREMAVTEQRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRN 387          

HSP 2 Score: 32.3426 bits (72), Expect = 1.608e-11
Identity = 19/54 (35.19%), Postives = 25/54 (46.30%), Query Frame = -1
Query:  177 RDPCE*FQKWVKRIGWWS-------------TTMHAIQGAGKPKNPLLGDSFND 299
            R+P   F+KWV+  GWWS               + AIQ A K +   L + FND
Sbjct:  386 RNPVNRFRKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFND 439          
BLAST of HO062439 vs. TAIR peptide
Match: AT5G34780.1 (| Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:12961682-12963892 REVERSE LENGTH=365)

HSP 1 Score: 58.151 bits (139), Expect = 4.580e-9
Identity = 48/117 (41.03%), Postives = 60/117 (51.28%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS--EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHAG   + ++    VFI RNNGW  S   S+  RSDG+        I SIRVDGNDA  +  S  CS  EM    +    + + +    HHSTSDD  KYR+     YWK  R+
Sbjct:   42 GDFHAGLNFAAVMEAPVVFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAV-YSAVCSAREMAVTEQRPVLIEMMIYRVGHHSTSDDSTKYRAADEIQYWKMSRN 157          
BLAST of HO062439 vs. TAIR peptide
Match: AT5G09300.2 (| Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:2884282-2886291 REVERSE LENGTH=401)

HSP 1 Score: 54.299 bits (129), Expect = 6.614e-8
Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS-EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHA    + ++    +FI RNNGW  S P S   RSDG+        I SIRVDGNDA  +  + + + EM  + +    +        HHSTSDD  +YRS G   +W   R+
Sbjct:  201 GDFHAALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYSAVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARN 316          
BLAST of HO062439 vs. TAIR peptide
Match: AT5G09300.1 (| Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:2884282-2886797 REVERSE LENGTH=472)

HSP 1 Score: 54.299 bits (129), Expect = 6.614e-8
Identity = 43/116 (37.07%), Postives = 58/116 (50.00%), Query Frame = -3
Query:  292 GRFHAG*CRSMMLR---VFIRRNNGWP-SVPPSKTIRSDGLCEV*LC--IWSIRVDGNDACCL*CSPYCS-EML*KNKDQF*LRL*LIE*EHHSTSDDPPKYRSTGGD*YWK*KRS 618
            G FHA    + ++    +FI RNNGW  S P S   RSDG+        I SIRVDGNDA  +  + + + EM  + +    +        HHSTSDD  +YRS G   +W   R+
Sbjct:  272 GDFHAALNIAAVMEAPVLFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYSAVHTAREMAIREQRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARN 387          
The following BLAST results are available for this feature:
BLAST of HO062439 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
B9S2P3_RICCO8.175e-1038.832-oxoisovalerate dehydrogenase, putative OS=Ricinu... [more]
Q9LPL5_ARATH2.301e-938.79Branched-chain alpha keto-acid dehydrogenase E1-al... [more]
D7KK08_ARALY5.026e-938.79Putative uncharacterized protein OS=Arabidopsis ly... [more]
B5LAT3_CAPAN1.706e-732.12Putative branched-chain alpha-keto acid dehydrogen... [more]
Q3E8Q6_ARATH6.482e-741.03Putative uncharacterized protein At5g34780.1 OS=Ar... [more]
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BLAST of HO062439 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G21400.11.608e-1138.79| Symbols: | Thiamin diphosphate-binding fold (TH... [more]
AT5G34780.14.580e-941.03| Symbols: | Thiamin diphosphate-binding fold (TH... [more]
AT5G09300.26.614e-837.07| Symbols: | Thiamin diphosphate-binding fold (TH... [more]
AT5G09300.16.614e-837.07| Symbols: | Thiamin diphosphate-binding fold (TH... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062439 ID=HO062439; Name=HO062439; organism=Cicer arietinum; type=EST; length=647bp
GGCAAGGCACCCCCCCACTTTATTTTAAATTAGGCCCGCCAACTTCCGTA
CAAAGGATTATTTGGGTTGTAAAAATCTCCAAAGGAACGCCAAAAGGATA
GCCTTTGGGAAACTTTTCAAGGGTTTTCTTAAAATTCTTTCTTGCTCCCC
AGGGGTGGATGAAAGTTGGGCAAAAAATCATTAAAACTGTCCCCAAGTAA
AGGGTTTTTGGGCTTTCCCGCCCCTTGAATTGCATGCATGGTCGTACTCC
ACCAACCAATTCTTTTTACCCATTTTTGAAATCACTCACAGGGATCTCTT
TCATTTCCAGTATCAGTCTCCTCCAGTGGACCTGTACTTAGGTGGATCAT
CAGATGTAGAGTGGTGTTCCTACTCTATAAGTCAGAGCCTCAATTAAAAC
TGGTCTTTGTTCTTTTATAGCATTTCCGAGCAGTATGGACTGCACTATAA
ACAGCAAGCATCATTTCCATCGACTCTTATACTCCATATGCATAGCTAGA
CTTCACACAATCCATCACTTCGAATTGTCTTCGACGGGGGTACTGATGGC
CATCCATTGTTACGACGGATAAAAACACGGAGCATCATACTGCGGCATCA
ACCAGCATGAAATCTCCCTCCTATGCTCCATCTCCAGTAGTGACAGC
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