HO066444

EST Overview


Name	HO066444
Unique Name	HO066444
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	408

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO066444 vs. SwissProt
Match: EXOS3_DICDI (Putative exosome complex exonuclease rrp40 OS=Dictyostelium discoideum GN=exosc3 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.460e-25
Identity = 58/123 (47.15%), Postives = 72/123 (58.54%), Query Frame = 3

Query:    3 GRLRFSKPNK-YWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLS 368
            G LR+SK ++ YW+EN QKRYVP  ED V+G +++   ++F VDI     A L   +FEG T+ N P    G L+Y RV  AN  M PE+ C     KA  FG L  GYM  CS GLS  LLS
Sbjct:   42 GVLRYSKFHRFYWIENEQKRYVPQVEDMVIGTIIEKHAESFKVDIGSSCSALLSAYSFEGATKSNKPLLNVGNLIYCRVTVANRDMEPEVVCLSQKQKAEGFGQLIGGYMLNCSLGLSHYLLS 164

[Close]

BLAST of HO066444 vs. SwissProt
Match: EXOS3_MOUSE (Exosome complex exonuclease RRP40 OS=Mus musculus GN=Exosc3 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 1.487e-22
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 3

Query:    3 GRLRFSKPNK-----YWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGAL-KEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR  +P+      YWV++ QKRYVP   D V+GIV+    D F VD+ G   A L  LAFEG T+RN P  + G L+Y + V AN  M PE+ C D+ G+A   G + ++G +F+ + GL R LL +P C +
Sbjct:   84 GRLRHKEPSGGGGGVYWVDSQQKRYVPVKGDHVIGIVIAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQCVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEI 216

[Close]

BLAST of HO066444 vs. SwissProt
Match: EXOS3_BOVIN (Exosome complex exonuclease RRP40 OS=Bos taurus GN=EXOSC3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.312e-22
Identity = 58/135 (42.96%), Postives = 78/135 (57.78%), Query Frame = 3

Query:    3 GRLRFSKPNK------YWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGAL-KEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR  +P        YWV++ QKRYVP   D V+GIV     D F VD+ G   A L  LAFEG T+RN P  + G L+Y + V AN  M PE+ C D+ G+A   G + ++G +F+ + GL R LL +P C +
Sbjct:   84 GRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEI 217

[Close]

BLAST of HO066444 vs. SwissProt
Match: EXOS3_HUMAN (Exosome complex exonuclease RRP40 OS=Homo sapiens GN=EXOSC3 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 7.379e-22
Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 3

Query:    3 GRLRFSKPNK------YWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGAL-KEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR  +P        YWV++ QKRYVP   D V+GIV     D F VD+ G   A L  L+FEG T+RN P  + G L+Y + V AN  M PE+ C D+ G+A   G + ++G +F+ + GL R LL +P C +
Sbjct:   84 GRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEI 217

[Close]

BLAST of HO066444 vs. SwissProt
Match: RRP40_SCHPO (Exosome complex component rrp40 OS=Schizosaccharomyces pombe GN=rrp40 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.190e-17
Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDA-SGKAGEFGALKEGYMFECSTGLS 353
            GRL  +  N   +++  KRY+P   D V+G ++    + + VDI    +A L  LAFE  TR++ P    G+L+Y RV  A+  M PEL C DA +GKA  +G LK GYM    TGLS
Sbjct:   53 GRLHQTGKNAMLIDSRTKRYIPATNDQVIGQIISRFAEGYRVDIGSAHIAQLNALAFENVTRKSRPNLNVGSLVYARVSLADRDMEPELECFDATTGKAAGYGELKNGYMI---TGLS 167

[Close]

BLAST of HO066444 vs. SwissProt
Match: RRP40_YEAST (Exosome complex component RRP40 OS=Saccharomyces cerevisiae GN=RRP40 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.014e-11
Identity = 33/119 (27.73%), Postives = 66/119 (55.46%), Query Frame = 3

Query:   36 WVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKG-PALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDA-SGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            +++ S KRY+P   D V+G+++ +  D++ V ++   +   L  +AF   +++N P  + G L+Y RV  A   +  E+ C D+ +G+   FG L++G + + +   +R LL +   P+
Sbjct:   56 YIDYSSKRYIPSVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFPNASKKNRPTLQVGDLVYARVCTAEKELEAEIECFDSTTGRDAGFGILEDGMIIDVNFNFARQLLFNNDFPL 174

[Close]

BLAST of HO066444 vs. TrEMBL
Match: B7FLI0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.210e-64
Identity = 119/128 (92.97%), Postives = 123/128 (96.09%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLRFSKPNKYWVE+SQKRYVPHAEDSVLGI+VDSR DNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE G L+YVRVVKA PGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLS+PTCPV
Sbjct:   53 GRLRFSKPNKYWVESSQKRYVPHAEDSVLGIIVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEVGALIYVRVVKAIPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSTPTCPV 180

[Close]

BLAST of HO066444 vs. TrEMBL
Match: A9PA72_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728586 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.210e-64
Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+LRFSKPNKYWVE SQKRYVP AEDSVLGIVVDS+ DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKA EFGALK+GYMFECSTGLSRMLLSSPTCPV
Sbjct:   53 GKLRFSKPNKYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPV 180

[Close]

BLAST of HO066444 vs. TrEMBL
Match: B9RB31_RICCO (Exosome complex exonuclease RRP40, putative OS=Ricinus communis GN=RCOM_1510750 PE=4 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.608e-62
Identity = 115/128 (89.84%), Postives = 123/128 (96.09%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+LRFSKPNKYWVE+S KRY+P AEDSVLGIVVDS+ +NFLVDIKGPA+AFLPVLAFEGGTRRN+PKFEAGTLLYVRVVKANPGMNPELSCTDASGKA EFG LK+GYMFECSTGLSRMLLSSPTCPV
Sbjct:   25 GKLRFSKPNKYWVESSHKRYMPCAEDSVLGIVVDSKAENFLVDIKGPAMAFLPVLAFEGGTRRNVPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAVEFGVLKDGYMFECSTGLSRMLLSSPTCPV 152

[Close]

BLAST of HO066444 vs. TrEMBL
Match: D7SHR2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007738001 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 1.751e-61
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLRFSKPNKYWVE+SQKRYVP  ED+VLGIVVDS+ DNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKAN GMNPELSCTDASGKA EFG LK+GYMFE STGLSRMLLSSPTCPV
Sbjct:   50 GRLRFSKPNKYWVESSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPV 177

[Close]

BLAST of HO066444 vs. TrEMBL
Match: Q5JLX2_ORYSJ (ALM beta-like OS=Oryza sativa subsp. japonica GN=B1078G07.6 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 7.613e-57
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR SKPNKYWVE+SQKRY+P  ED+VLG+VVD++PDNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+Y RVVKAN  MNPELSC DA+GKA EFG LK+GYMF+ STGLSRMLLSSPTCPV
Sbjct:   52 GRLRLSKPNKYWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPV 179

[Close]

BLAST of HO066444 vs. TrEMBL
Match: A2WXU6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04749 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 7.613e-57
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR SKPNKYWVE+SQKRY+P  ED+VLG+VVD++PDNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+Y RVVKAN  MNPELSC DA+GKA EFG LK+GYMF+ STGLSRMLLSSPTCPV
Sbjct:   52 GRLRLSKPNKYWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPV 179

[Close]

BLAST of HO066444 vs. TrEMBL
Match: C6T951_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.299e-56
Identity = 105/117 (89.74%), Postives = 112/117 (95.73%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLS 353
            GRLRFSKP+KYWVENSQKRYVP+AEDSVLGIVVDSR DNFLVDIKGP LAFLPVLAFEGGTRRNIP+FE GTL+YVRV+KANPGMNPELSCTDASGKA EFGALK+GYMFEC+TG S
Sbjct:   53 GRLRFSKPHKYWVENSQKRYVPYAEDSVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPRFEIGTLIYVRVIKANPGMNPELSCTDASGKAAEFGALKDGYMFECTTGFS 169

[Close]

BLAST of HO066444 vs. TrEMBL
Match: C5XFW6_SORBI (Putative uncharacterized protein Sb03g030230 OS=Sorghum bicolor GN=Sb03g030230 PE=4 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.696e-56
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+LR  KPNKYW+ENSQKRY+P  ED+VLGIVVD++PDNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+Y RVVKAN  MNPELSC DASGKA EFG LK+GYMF+ STG+SRMLLSSPTCPV
Sbjct:   52 GKLRLLKPNKYWIENSQKRYIPSVEDTVLGIVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVKANSIMNPELSCMDASGKAAEFGQLKDGYMFDTSTGMSRMLLSSPTCPV 179

[Close]

BLAST of HO066444 vs. TrEMBL
Match: B8A6W9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03146 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.893e-56
Identity = 105/128 (82.03%), Postives = 116/128 (90.62%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR SKP+KYWVE+SQKRY+P  ED+VLG+VVD++PDNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+Y RVVKAN  MNPELSC DA+GKA EFG LK+GYMF+ STGLSRMLLSSPTCPV
Sbjct:   52 GRLRLSKPSKYWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPV 179

[Close]

BLAST of HO066444 vs. TrEMBL
Match: Q0JKN6_ORYSJ (Os01g0661400 protein OS=Oryza sativa subsp. japonica GN=Os01g0661400 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.778e-56
Identity = 104/128 (81.25%), Postives = 116/128 (90.62%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            GRLR SKP+KYWVE+SQKRY+P  ED+VLG+VVD++PDNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE GTL+Y RVVKAN  MNPELSC DA+GKA EFG LK+GYMF+ STGLSRMLLSSPTCP+
Sbjct:   52 GRLRLSKPSKYWVESSQKRYIPSVEDTVLGVVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVKANSIMNPELSCMDATGKAAEFGQLKDGYMFDTSTGLSRMLLSSPTCPI 179

[Close]

BLAST of HO066444 vs. TAIR peptide
Match: AT4G32175.1 (| Symbols: | PNAS-3 related | chr4:15535555-15537537 FORWARD LENGTH=241)

HSP 1 Score: 205.682 bits (522), Expect = 7.019e-54
Identity = 99/128 (77.34%), Postives = 111/128 (86.72%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+L +SKPNKYW+E+S KRY+P  +D VLGIVVDSR DNF VDIKGP LA LPVLAFEGGTRRNIPKFE GTLLY+RVVK N GMNPELSCT+ASGKA  FG L++G+MFE STGLSRMLL+SPT PV
Sbjct:   53 GKLSYSKPNKYWLESSHKRYIPRPDDHVLGIVVDSRADNFWVDIKGPQLALLPVLAFEGGTRRNIPKFEVGTLLYLRVVKTNIGMNPELSCTEASGKAALFGPLRDGFMFETSTGLSRMLLNSPTRPV 180

[Close]

BLAST of HO066444 vs. TAIR peptide
Match: AT2G25355.2 (| Symbols: | PNAS-3 related | chr2:10801567-10803591 FORWARD LENGTH=213)

HSP 1 Score: 201.06 bits (510), Expect = 1.729e-52
Identity = 96/128 (75.00%), Postives = 105/128 (82.03%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+LR+SKPNKYWVE+S KRYVP  ED VLGIVVD + +N+ +DIKGP LA LPVLAFEG  RRN PKFE  TLLY RVVK N GMNPELSC D SGKA  FG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct:   25 GKLRYSKPNKYWVESSHKRYVPRPEDHVLGIVVDCKGENYWIDIKGPQLALLPVLAFEGANRRNYPKFEVSTLLYTRVVKTNTGMNPELSCVDESGKAAGFGPLKDGFMFETSTGLSRMLLSSPTCPV 152

[Close]

BLAST of HO066444 vs. TAIR peptide
Match: AT2G25355.1 (| Symbols: | PNAS-3 related | chr2:10801391-10803591 FORWARD LENGTH=241)

HSP 1 Score: 201.06 bits (510), Expect = 1.729e-52
Identity = 96/128 (75.00%), Postives = 105/128 (82.03%), Query Frame = 3

Query:    3 GRLRFSKPNKYWVENSQKRYVPHAEDSVLGIVVDSRPDNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVKANPGMNPELSCTDASGKAGEFGALKEGYMFECSTGLSRMLLSSPTCPV 386
            G+LR+SKPNKYWVE+S KRYVP  ED VLGIVVD + +N+ +DIKGP LA LPVLAFEG  RRN PKFE  TLLY RVVK N GMNPELSC D SGKA  FG LK+G+MFE STGLSRMLLSSPTCPV
Sbjct:   53 GKLRYSKPNKYWVESSHKRYVPRPEDHVLGIVVDCKGENYWIDIKGPQLALLPVLAFEGANRRNYPKFEVSTLLYTRVVKTNTGMNPELSCVDESGKAAGFGPLKDGFMFETSTGLSRMLLSSPTCPV 180

The following BLAST results are available for this feature:

BLAST of HO066444 vs. SwissProt
BLAST of HO066444 vs. TrEMBL
BLAST of HO066444 vs. TAIR peptide

BLAST of HO066444 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
EXOS3_DICDI	5.460e-25	47.15	Putative exosome complex exonuclease rrp40 OS=Dict...	[more]
EXOS3_MOUSE	1.487e-22	43.28	Exosome complex exonuclease RRP40 OS=Mus musculus ...	[more]
EXOS3_BOVIN	3.312e-22	42.96	Exosome complex exonuclease RRP40 OS=Bos taurus GN...	[more]
EXOS3_HUMAN	7.379e-22	42.22	Exosome complex exonuclease RRP40 OS=Homo sapiens ...	[more]
RRP40_SCHPO	4.190e-17	41.53	Exosome complex component rrp40 OS=Schizosaccharom...	[more]
RRP40_YEAST	2.014e-11	27.73	Exosome complex component RRP40 OS=Saccharomyces c...	[more]

BLAST of HO066444 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FLI0_MEDTR	2.210e-64	92.97	Putative uncharacterized protein OS=Medicago trunc...	[more]
A9PA72_POPTR	2.210e-64	93.75	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RB31_RICCO	4.608e-62	89.84	Exosome complex exonuclease RRP40, putative OS=Ric...	[more]
D7SHR2_VITVI	1.751e-61	91.41	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q5JLX2_ORYSJ	7.613e-57	82.81	ALM beta-like OS=Oryza sativa subsp. japonica GN=B...	[more]
A2WXU6_ORYSI	7.613e-57	82.81	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C6T951_SOYBN	1.299e-56	89.74	Putative uncharacterized protein OS=Glycine max PE...	[more]
C5XFW6_SORBI	1.696e-56	82.03	Putative uncharacterized protein Sb03g030230 OS=So...	[more]
B8A6W9_ORYSI	2.893e-56	82.03	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q0JKN6_ORYSJ	3.778e-56	81.25	Os01g0661400 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of HO066444 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G32175.1	7.019e-54	77.34	\| Symbols: \| PNAS-3 related \| chr4:15535555-15537...	[more]
AT2G25355.2	1.729e-52	75.00	\| Symbols: \| PNAS-3 related \| chr2:10801567-10803...	[more]
AT2G25355.1	1.729e-52	75.00	\| Symbols: \| PNAS-3 related \| chr2:10801391-10803...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21321	PNAS-3 RELATED	coord: 7..123 score: 3.5
None	No IPR available	PANTHER	PTHR21321:SF1	PNAS-3 RELATED	coord: 7..123 score: 3.5
None	No IPR available	SEG	seg	seg	coord: 15..24 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066444 ID=HO066444; Name=HO066444; organism=Cicer arietinum; type=EST; length=408bp
CTGGCAGGCTTCGGTTCTCCAAGCCTAATAAATACTGGGTTGAAAATTCT
CAAAAGAGGTATGTGCCTCATGCAGAGGATTCGGTTCTTGGAATAGTTGT
TGACTCCAGACCAGATAACTTTCTTGTGGATATAAAAGGACCTGCTTTAG
CATTTCTACCAGTGCTTGCATTTGAAGGAGGAACCAGAAGAAATATACCT
AAGTTTGAGGCAGGCACTTTGCTTTATGTGCGGGTTGTAAAAGCAAACCC
TGGAATGAATCCTGAGCTATCATGCACTGATGCCAGTGGGAAAGCAGGAG
AGTTTGGTGCTCTAAAAGAAGGCTATATGTTCGAGTGTTCAACCGGTCTC
TCAAGGATGCTTCTTAGCTCACCCACATGTCCAGTACCTGCCCGGGCGGC
CGCTCGAA

Search form