FE672956

EST Overview


Name	FE672956
Unique Name	FE672956
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	533

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE672956 vs. TrEMBL
Match: D7KWZ3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_315930 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.036e-12
Identity = 46/112 (41.07%), Postives = 57/112 (50.89%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PKSDIYSTFV+H         NR ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +E+GDFGT+IVK
Sbjct:    2 DHNSPRSRRSRKPEPKSDIYSTFVVHSDSDSDQGRNRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDEDDSMLPPLLKRLPKDFGGGASLDYDDDDGDETGDFGTMIVK 113

[Close]

BLAST of FE672956 vs. TrEMBL
Match: Q9LQA1_ARATH (F4N2.17 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.968e-11
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PK DIYSTFV+H         +R ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +ESGDFGT+IVK
Sbjct:    2 DHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVK 113

[Close]

BLAST of FE672956 vs. TrEMBL
Match: Q8VYC1_ARATH (Putative serine threonine kinase OS=Arabidopsis thaliana GN=At1g69220 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.968e-11
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PK DIYSTFV+H         +R ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +ESGDFGT+IVK
Sbjct:    2 DHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVK 113

[Close]

BLAST of FE672956 vs. TrEMBL
Match: O24527_ARATH (Putative serine/threonine kinase; 70789-76610 OS=Arabidopsis thaliana GN=SIK1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.968e-11
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PK DIYSTFV+H         +R ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +ESGDFGT+IVK
Sbjct:    2 DHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVK 113

[Close]

BLAST of FE672956 vs. TAIR peptide
Match: AT1G69220.2 (| Symbols: SIK1 | Protein kinase superfamily protein | chr1:26020298-26026119 REVERSE LENGTH=809)

HSP 1 Score: 72.4034 bits (176), Expect = 1.647e-13
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PK DIYSTFV+H         +R ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +ESGDFGT+IVK
Sbjct:    2 DHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVK 113

[Close]

BLAST of FE672956 vs. TAIR peptide
Match: AT1G69220.1 (| Symbols: SIK1 | Protein kinase superfamily protein | chr1:26020298-26026119 REVERSE LENGTH=836)

HSP 1 Score: 72.4034 bits (176), Expect = 1.647e-13
Identity = 45/112 (40.18%), Postives = 56/112 (50.00%), Query Frame = 3

Query:   24 EFRSSFSALTRNTRPKSDIYSTFVIHXXXXXXSETNRRRKAVSAEAQE--DPYGTMVFK--DNGHXXXXXXXXXXXXXXXXXXXXDFGGGASMDYDDD--EESGDFGTVIVK 341
            +  S  S  +R   PK DIYSTFV+H         +R ++    E  E  D Y TMV+K   +G                     DFGGGAS+DYDDD  +ESGDFGT+IVK
Sbjct:    2 DHNSPKSRRSRKPEPKPDIYSTFVVHSDSDSDQGRDRDKRKAKPEEDENVDLYATMVYKGDSDGEGEEDDDDDSMLPPLLKRLPKDFGGGASLDYDDDDGDESGDFGTMIVK 113

The following BLAST results are available for this feature:

BLAST of FE672956 vs. TrEMBL
BLAST of FE672956 vs. TAIR peptide

BLAST of FE672956 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4


Match Name	E-value	Identity	Description
D7KWZ3_ARALY	3.036e-12	41.07	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9LQA1_ARATH	1.968e-11	40.18	F4N2.17 OS=Arabidopsis thaliana PE=4 SV=1	[more]
Q8VYC1_ARATH	1.968e-11	40.18	Putative serine threonine kinase OS=Arabidopsis th...	[more]
O24527_ARATH	1.968e-11	40.18	Putative serine/threonine kinase; 70789-76610 OS=A...	[more]

BLAST of FE672956 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G69220.2	1.647e-13	40.18	\| Symbols: SIK1 \| Protein kinase superfamily prote...	[more]
AT1G69220.1	1.647e-13	40.18	\| Symbols: SIK1 \| Protein kinase superfamily prote...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 15..26 score: NAcoord: 27..42 score
None	No IPR available	SEG	seg	seg	coord: 34..41 score: NAcoord: 44..59 score: NAcoord: 64..72 score
None	No IPR available	SEG	seg	seg	coord: 34..39 score: NAcoord: 69..88 score: NAcoord: 114..125 score: NAcoord: 148..161 score
None	No IPR available	SEG	seg	seg	coord: 17..30 score: NAcoord: 63..82 score
None	No IPR available	SEG	seg	seg	coord: 13..20 score
None	No IPR available	SEG	seg	seg	coord: 38..65 score: NAcoord: 90..96 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE672956 ID=FE672956; Name=FE672956; organism=Cicer arietinum; type=EST; length=533bp
GGATCCCCGGGGCTGCAGGATTCGAATTCCGGAGCTCTTTCTCCGCGCTA
ACCCGGAATACCCGACCCAAATCCGATATATACTCTACTTTTGTAATCCA
CGACGACGACGACGACGACAGCGAAACCAATCGGCGTCGGAAAGCCGTAA
GCGCGGAAGCTCAGGAAGATCCATACGGTACAATGGTGTTCAAAGACAAC
GGTCACGACGACGACGATGAAGACGAAGATTCCTCTCTCCCTCCTCTCCT
CAAGCGTCTCCCCAAGGATTTCGGTGGCGGAGCGTCGATGGACTACGACG
ATGACGAAGAATCCGGCGACTTCGGTACCGTGATCGTGAAGTCCGATCGT
AGCCGGCAGCGGGATCGATCTTCTTCTGGTTTGACCTCACCGGCGGGTTC
GACCTGGAAAACTCGGAGTTCTTTTCAGGCGAATCCTTTGAACGGCGGGG
ACGATGATGAGGATGAGGATGACGACGGCGGTGGATTTTCAAGGTTCGTT
GTGCGTACGACGGTAAGGAGCGGCGAAAGAGAG

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