GR394847
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR394847 vs. TrEMBL
Match: C6T6Z4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.565e-25 Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = -3 Query: 172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 426 +S+ P RGS +G ++ H MG+QDQGGN GEM+NGWGNN+QRD+KEP EDFLNDEAENGD GT DG REVGEFDLNAR Sbjct: 106 MSRVPMRGSALGSQGNDIVI---GHDMGEQDQGGNPGEMINGWGNNTQRDEKEPSEDFLNDEAENGDIGTQDGWREVGEFDLNAR 187
BLAST of GR394847 vs. TrEMBL
Match: D7T7G8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024286001 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.326e-17 Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = -3 Query: 172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426 +++ P R S +G G L G H M +Q+QG N EMMNGWGNN+QRD+KEP EDFLND E ENGD G D REVGEFDLN R Sbjct: 169 LARAPIRASALG--PQGNDLPIG-HDMAEQEQGVNPDEMMNGWGNNTQRDEKEPSEDFLNDEETENGDAGMQDEWREVGEFDLNTR 251
BLAST of GR394847 vs. TrEMBL
Match: Q9LF51_ARATH (Glutamine-rich protein OS=Arabidopsis thaliana GN=K3M16_80 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.466e-16 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3 Query: 172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357 +H MG+Q + N EMMNGWGNNSQR+DKEP EDFLNDE ENG+TG + RE GEFDLN+R Sbjct: 307 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369
BLAST of GR394847 vs. TrEMBL
Match: D7LX15_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488617 PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.466e-16 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3 Query: 172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357 +H MG+Q + N EMMNGWGNNSQR+DKEP EDFLNDE ENG+TG + RE GEFDLN+R Sbjct: 308 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 370
BLAST of GR394847 vs. TrEMBL
Match: B9IPX6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574012 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.611e-15 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = -3 Query: 172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426 +S+ P R S +G G + G H MG+Q+ G N EMMNGWG N+ RD+KEP EDFLND E ENG+T REVGEFDLN R Sbjct: 156 MSRAPIRASALG--SQGNSVPIG-HDMGEQEHGVNPDEMMNGWGGNAPRDEKEPSEDFLNDEETENGNTAVHSEWREVGEFDLNTR 238
BLAST of GR394847 vs. TrEMBL
Match: A9PGR6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.611e-15 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = -3 Query: 172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426 +S+ P R S +G G + G H MG+Q+ G N EMMNGWG N+ RD+KEP EDFLND E ENG+T REVGEFDLN R Sbjct: 346 MSRAPIRASALG--SQGNSVPIG-HDMGEQEHGVNPDEMMNGWGGNAPRDEKEPSEDFLNDEETENGNTAVHSEWREVGEFDLNTR 428
BLAST of GR394847 vs. TrEMBL
Match: B9I726_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571396 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.214e-14 Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426 +S+ P R S +G H M +Q+ N EMMNGWG N+QRD+KEP EDFLND E ENGDT REVGEFDLN R Sbjct: 277 MSRAPIRPSALG------------HDMREQEHSVNPEEMMNGWGGNAQRDEKEPSEDFLNDEETENGDTAGHGEWREVGEFDLNTR 350
BLAST of GR394847 vs. TrEMBL
Match: B9SDI1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1517980 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.517e-13 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = -3 Query: 172 HAMGDQDQGGNQGEMMNGWG-NNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 354 H +GDQ+ +MMNGWG NN+QRD++EP EDFLND E ENGDTG REVGEFDLN R Sbjct: 338 HDIGDQEHSVTPEQMMNGWGGNNAQRDEREPSEDFLNDEETENGDTGGQGEWREVGEFDLNTR 400
BLAST of GR394847 vs. TrEMBL
Match: D7L0H8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896349 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 7.292e-8 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = -3 Query: 172 GDQDQGGNQGEMM---NGWGNN-SQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 345 G+Q + N EMM NGWGNN SQ+++KEP EDFLND E + G + R G+FDLN R Sbjct: 238 GEQGRNMNPNEMMMLMNGWGNNNSQKEEKEPLEDFLND--EENENGEHENWRRTGDFDLNTR 297
BLAST of GR394847 vs. TrEMBL
Match: Q0INF4_ORYSJ (Os12g0465700 protein OS=Oryza sativa subsp. japonica GN=Os12g0465700 PE=4 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 1.244e-7 Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = -3 Query: 172 AHAMGDQDQGGNQGEMM-----NGWGNNSQRDDKEPFEDFLND--EAENGDTGTPDGGREVGEFDLNAR 357 AHA Q + G EMM +GWGN +QRDD++P EDFLND E ENG++ + R GE DLN+R Sbjct: 165 AHAAASQGEDGPSHEMMQEQGEDGWGN-AQRDDEDPSEDFLNDENEPENGNSDMQEDWRRSGELDLNSR 232
BLAST of GR394847 vs. TAIR peptide
Match: AT5G17510.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5770518-5772343 REVERSE LENGTH=369) HSP 1 Score: 90.1225 bits (222), Expect = 1.051e-18 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3 Query: 172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357 +H MG+Q + N EMMNGWGNNSQR+DKEP EDFLNDE ENG+TG + RE GEFDLN+R Sbjct: 307 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369
BLAST of GR394847 vs. TAIR peptide
Match: AT3G03460.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). | chr3:823069-824485 REVERSE LENGTH=354) HSP 1 Score: 57.7658 bits (138), Expect = 5.781e-9 Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = -3 Query: 172 GDQDQGGNQGEMM---NGWGNN-----SQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 345 G+Q + N EMM NGWGNN SQ+++KEP EDFLND E + G + R G+FDLN R Sbjct: 291 GEQGRNMNPNEMMLLMNGWGNNNNNNNSQKEEKEPLEDFLND--EENENGEHEKWRRSGDFDLNIR 354 The following BLAST results are available for this feature:
BLAST of GR394847 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR394847 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR394847 ID=GR394847; Name=GR394847; organism=Cicer arietinum; type=EST; length=635bpback to top |