GR394847

EST Overview
NameGR394847
Unique NameGR394847
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length635
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394847 vs. TrEMBL
Match: C6T6Z4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.565e-25
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = -3
Query:  172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 426
            +S+ P RGS +G      ++    H MG+QDQGGN GEM+NGWGNN+QRD+KEP EDFLNDEAENGD GT DG REVGEFDLNAR
Sbjct:  106 MSRVPMRGSALGSQGNDIVI---GHDMGEQDQGGNPGEMINGWGNNTQRDEKEPSEDFLNDEAENGDIGTQDGWREVGEFDLNAR 187          
BLAST of GR394847 vs. TrEMBL
Match: D7T7G8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024286001 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.326e-17
Identity = 51/86 (59.30%), Postives = 59/86 (68.60%), Query Frame = -3
Query:  172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426
            +++ P R S +G    G  L  G H M +Q+QG N  EMMNGWGNN+QRD+KEP EDFLND E ENGD G  D  REVGEFDLN R
Sbjct:  169 LARAPIRASALG--PQGNDLPIG-HDMAEQEQGVNPDEMMNGWGNNTQRDEKEPSEDFLNDEETENGDAGMQDEWREVGEFDLNTR 251          
BLAST of GR394847 vs. TrEMBL
Match: Q9LF51_ARATH (Glutamine-rich protein OS=Arabidopsis thaliana GN=K3M16_80 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.466e-16
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3
Query:  172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357
            +H MG+Q +  N  EMMNGWGNNSQR+DKEP EDFLNDE  ENG+TG  +  RE GEFDLN+R
Sbjct:  307 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369          
BLAST of GR394847 vs. TrEMBL
Match: D7LX15_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488617 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.466e-16
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3
Query:  172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357
            +H MG+Q +  N  EMMNGWGNNSQR+DKEP EDFLNDE  ENG+TG  +  RE GEFDLN+R
Sbjct:  308 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 370          
BLAST of GR394847 vs. TrEMBL
Match: B9IPX6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574012 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.611e-15
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = -3
Query:  172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426
            +S+ P R S +G    G  +  G H MG+Q+ G N  EMMNGWG N+ RD+KEP EDFLND E ENG+T      REVGEFDLN R
Sbjct:  156 MSRAPIRASALG--SQGNSVPIG-HDMGEQEHGVNPDEMMNGWGGNAPRDEKEPSEDFLNDEETENGNTAVHSEWREVGEFDLNTR 238          
BLAST of GR394847 vs. TrEMBL
Match: A9PGR6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.611e-15
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = -3
Query:  172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426
            +S+ P R S +G    G  +  G H MG+Q+ G N  EMMNGWG N+ RD+KEP EDFLND E ENG+T      REVGEFDLN R
Sbjct:  346 MSRAPIRASALG--SQGNSVPIG-HDMGEQEHGVNPDEMMNGWGGNAPRDEKEPSEDFLNDEETENGNTAVHSEWREVGEFDLNTR 428          
BLAST of GR394847 vs. TrEMBL
Match: B9I726_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571396 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.214e-14
Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  172 VSKPP*RGSGIGFPKAGGIL*WGAHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 426
            +S+ P R S +G            H M +Q+   N  EMMNGWG N+QRD+KEP EDFLND E ENGDT      REVGEFDLN R
Sbjct:  277 MSRAPIRPSALG------------HDMREQEHSVNPEEMMNGWGGNAQRDEKEPSEDFLNDEETENGDTAGHGEWREVGEFDLNTR 350          
BLAST of GR394847 vs. TrEMBL
Match: B9SDI1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1517980 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.517e-13
Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = -3
Query:  172 HAMGDQDQGGNQGEMMNGWG-NNSQRDDKEPFEDFLND-EAENGDTGTPDGGREVGEFDLNAR 354
            H +GDQ+      +MMNGWG NN+QRD++EP EDFLND E ENGDTG     REVGEFDLN R
Sbjct:  338 HDIGDQEHSVTPEQMMNGWGGNNAQRDEREPSEDFLNDEETENGDTGGQGEWREVGEFDLNTR 400          
BLAST of GR394847 vs. TrEMBL
Match: D7L0H8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896349 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.292e-8
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = -3
Query:  172 GDQDQGGNQGEMM---NGWGNN-SQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 345
            G+Q +  N  EMM   NGWGNN SQ+++KEP EDFLND  E  + G  +  R  G+FDLN R
Sbjct:  238 GEQGRNMNPNEMMMLMNGWGNNNSQKEEKEPLEDFLND--EENENGEHENWRRTGDFDLNTR 297          
BLAST of GR394847 vs. TrEMBL
Match: Q0INF4_ORYSJ (Os12g0465700 protein OS=Oryza sativa subsp. japonica GN=Os12g0465700 PE=4 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 1.244e-7
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = -3
Query:  172 AHAMGDQDQGGNQGEMM-----NGWGNNSQRDDKEPFEDFLND--EAENGDTGTPDGGREVGEFDLNAR 357
            AHA   Q + G   EMM     +GWGN +QRDD++P EDFLND  E ENG++   +  R  GE DLN+R
Sbjct:  165 AHAAASQGEDGPSHEMMQEQGEDGWGN-AQRDDEDPSEDFLNDENEPENGNSDMQEDWRRSGELDLNSR 232          
BLAST of GR394847 vs. TAIR peptide
Match: AT5G17510.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5770518-5772343 REVERSE LENGTH=369)

HSP 1 Score: 90.1225 bits (222), Expect = 1.051e-18
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = -3
Query:  172 AHAMGDQDQGGNQGEMMNGWGNNSQRDDKEPFEDFLNDEA-ENGDTGTPDGGREVGEFDLNAR 357
            +H MG+Q +  N  EMMNGWGNNSQR+DKEP EDFLNDE  ENG+TG  +  RE GEFDLN+R
Sbjct:  307 SHEMGEQGRNMNPDEMMNGWGNNSQREDKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369          
BLAST of GR394847 vs. TAIR peptide
Match: AT3G03460.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). | chr3:823069-824485 REVERSE LENGTH=354)

HSP 1 Score: 57.7658 bits (138), Expect = 5.781e-9
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = -3
Query:  172 GDQDQGGNQGEMM---NGWGNN-----SQRDDKEPFEDFLNDEAENGDTGTPDGGREVGEFDLNAR 345
            G+Q +  N  EMM   NGWGNN     SQ+++KEP EDFLND  E  + G  +  R  G+FDLN R
Sbjct:  291 GEQGRNMNPNEMMLLMNGWGNNNNNNNSQKEEKEPLEDFLND--EENENGEHEKWRRSGDFDLNIR 354          
The following BLAST results are available for this feature:
BLAST of GR394847 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T6Z4_SOYBN6.565e-2567.06Putative uncharacterized protein OS=Glycine max PE... [more]
D7T7G8_VITVI1.326e-1759.30Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LF51_ARATH1.466e-1666.67Glutamine-rich protein OS=Arabidopsis thaliana GN=... [more]
D7LX15_ARALY1.466e-1666.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9IPX6_POPTR3.611e-1554.65Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PGR6_POPTR3.611e-1554.65Putative uncharacterized protein OS=Populus tricho... [more]
B9I726_POPTR5.214e-1452.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SDI1_RICCO1.517e-1363.49Putative uncharacterized protein OS=Ricinus commun... [more]
D7L0H8_ARALY7.292e-851.61Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q0INF4_ORYSJ1.244e-749.28Os12g0465700 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GR394847 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G17510.11.051e-1866.67| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT3G03460.15.781e-948.48| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..18
score
NoneNo IPR availableSEGsegsegcoord: 20..50
score
NoneNo IPR availableSEGsegsegcoord: 2..22
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394847 ID=GR394847; Name=GR394847; organism=Cicer arietinum; type=EST; length=635bp
CCGCCAAATCTTAATATTGATTCAATAGTTTCATTCCGCTTGGGGGAGTT
GAGAAAAAAGTAATCTCAAGATATCAACTTGTAAATACACAGGATAATGC
TATTTCAAAATGAGTATCGATCCTTACACATAATTCAAACTCTCCCAGTT
GGTTTTAATTCAAATATCTCCCCTAGCATTCAAATCAAATTCGCCAACTT
CGCGCCCCCCATCTGGGGTACCAGTGTCCCCATTTTCGGCCTCGTCGTTC
AAAAAATCCTCAAAAGGCTCCTTGTCATCTCTCTGTGAATTGTTTCCCCA
TCCATTCATCATCTCACCCTGATTACCGCCCTGATCCTGATCTCCCATGG
CATGGGCCCCCCATCACAATATCCCCCCTGCCTTGGGAAACCCAATGCCA
CTCCCTCTTTAAGGGGGCTTCGAGACATCATTTTTATTATTAGAACTGGT
GAATAAACCCCCTTGGCTTGGAACCCTTGCGTTGGAAACCAACGGGCTTT
AATCCCCAAATTAATTTCCCGGGCCCCCCTGGCTGTCGCACCCTTATGGG
AAAAAGTTTCCCCCCCCCCCTTGAAAAGCAATAACCTTGGAGGTTTTCTA
AAAGGGGGCCCCCAAAAAAACCTTGGGGGAAAATC
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