GR396009

EST Overview
NameGR396009
Unique NameGR396009
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length416
Libraries
Library NameType
LIBEST_024781 ICC4958 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR396009 vs. TrEMBL
Match: Q10N24_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0285100 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-18
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKK+G+KTLFS FSPNKYVSWNPRRS++P SEE+DPI+RTERSNL  WTSP
Sbjct:   51 FKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101          
BLAST of GR396009 vs. TrEMBL
Match: B8ALJ5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11067 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-18
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKK+G+KTLFS FSPNKYVSWNPRRS++P SEE+DPI+RTERSNL  WTSP
Sbjct:   51 FKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101          
BLAST of GR396009 vs. TrEMBL
Match: B9SGS5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0819840 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.029e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            F+KQG+KTLFS FSPNKYVSWNPRRS +P SEE+DPIKR ERSNL+ WTSP
Sbjct:   25 FRKQGKKTLFSGFSPNKYVSWNPRRSKYPLSEEVDPIKRAERSNLELWTSP 75          
BLAST of GR396009 vs. TrEMBL
Match: B6UCD1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-18
Identity = 39/52 (75.00%), Postives = 49/52 (94.23%), Query Frame = 2
Query:  146 RFKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            +FKK+G++TLFS+FSP+KYV+WNPRRS++P SEE+DPIKRTERSNL  WTSP
Sbjct:   48 KFKKKGKRTLFSDFSPDKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 99          
BLAST of GR396009 vs. TrEMBL
Match: C5YN76_SORBI (Putative uncharacterized protein Sb07g024190 OS=Sorghum bicolor GN=Sb07g024190 PE=4 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.531e-17
Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FK +G++TLFS+FSPNKYV+WNPRRS++P SEE+DPIKRTERSNL  WTSP
Sbjct:   50 FKNKGKRTLFSDFSPNKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 100          
BLAST of GR396009 vs. TrEMBL
Match: C6TLP5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.611e-17
Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 2
Query:   50 KTLCSKRD--ESQTNGXXXXXXXXXXXXXXXXXXRFKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSPT 304
            K +CS RD  ESQ N                   +FKKQG K  FS FS +KYVSWNP+RS+FP SEE+DPIKRTERSNL FW SPT
Sbjct:   36 KPVCSNRDSKESQRNDDNNNKGDKFSTDWDKAWSKFKKQGGKKPFSKFS-DKYVSWNPKRSEFPLSEEVDPIKRTERSNLSFWNSPT 121          
BLAST of GR396009 vs. TrEMBL
Match: D7TQ99_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025542001 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-17
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            F+KQG+K LFS FSP+KYV+WNPRRS++P SEE+DPIKRTERSNL  WTSP
Sbjct:   70 FRKQGKKRLFSQFSPDKYVTWNPRRSNYPLSEEVDPIKRTERSNLMLWTSP 120          
BLAST of GR396009 vs. TrEMBL
Match: B8A1D7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-17
Identity = 38/51 (74.51%), Postives = 48/51 (94.12%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKK+G++TLFS+FSP+KYV+WNP+RS++P SEE+DPIKRTERSNL  WTSP
Sbjct:   57 FKKKGKRTLFSDFSPDKYVTWNPQRSEYPLSEEVDPIKRTERSNLMLWTSP 107          
BLAST of GR396009 vs. TrEMBL
Match: B9IIY7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_256696 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.887e-16
Identity = 36/51 (70.59%), Postives = 45/51 (88.24%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            F+K+G+K  FS FSPNKYV+WNP+RS++P SEE+DPIKR ERSNL+ WTSP
Sbjct:   15 FRKKGKKAFFSQFSPNKYVTWNPKRSNYPLSEEVDPIKRAERSNLRLWTSP 65          
BLAST of GR396009 vs. TrEMBL
Match: B6U691_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.401e-16
Identity = 37/51 (72.55%), Postives = 46/51 (90.20%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKK+G++TLFS+FSP+KYV WNPRRS++P SEE+DPIKR+E SNL  WTSP
Sbjct:   49 FKKKGKRTLFSDFSPDKYVIWNPRRSEYPLSEEVDPIKRSEISNLMLWTSP 99          
BLAST of GR396009 vs. TAIR peptide
Match: AT3G53470.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=135)

HSP 1 Score: 81.6481 bits (200), Expect = 1.590e-16
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKKQ +K+LFS F+ +KYV+WNP RS+F  SEE+DPIKRTERSNL  WTSP
Sbjct:   61 FKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 111          
BLAST of GR396009 vs. TAIR peptide
Match: AT3G53470.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=136)

HSP 1 Score: 81.6481 bits (200), Expect = 1.590e-16
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2
Query:  149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301
            FKKQ +K+LFS F+ +KYV+WNP RS+F  SEE+DPIKRTERSNL  WTSP
Sbjct:   62 FKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 112          
The following BLAST results are available for this feature:
BLAST of GR396009 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q10N24_ORYSJ2.362e-1880.39Expressed protein OS=Oryza sativa subsp. japonica ... [more]
B8ALJ5_ORYSI2.362e-1880.39Putative uncharacterized protein OS=Oryza sativa s... [more]
B9SGS5_RICCO4.029e-1880.39Putative uncharacterized protein OS=Ricinus commun... [more]
B6UCD1_MAIZE8.975e-1875.00Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5YN76_SORBI1.531e-1776.47Putative uncharacterized protein Sb07g024190 OS=So... [more]
C6TLP5_SOYBN2.611e-1756.32Putative uncharacterized protein OS=Glycine max PE... [more]
D7TQ99_VITVI4.454e-1776.47Whole genome shotgun sequence of line PN40024, sca... [more]
B8A1D7_MAIZE4.454e-1774.51Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B9IIY7_POPTR2.887e-1670.59Predicted protein (Fragment) OS=Populus trichocarp... [more]
B6U691_MAIZE8.401e-1672.55Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR396009 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G53470.11.590e-1670.59| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT3G53470.21.590e-1670.59| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..16
score: NAcoord: 31..48
score: NAcoord: 102..119
score
NoneNo IPR availableSEGsegsegcoord: 34..45
score: NAcoord: 75..89
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR396009 ID=GR396009; Name=GR396009; organism=Cicer arietinum; type=EST; length=416bp
TTTTATATCTCATCGTTTCTCTTCTTTATCATCGTCCTCTTTCCCCTTTA
AAACTCTCTGTTCCAAAAGGGACGAATCTCAAACAAACGGCAATAACAAT
AACAAAGATGATAAATCTTCAACGGATTGGGACAAGGCATGGTCAAGATT
CAAGAAGCAAGGAAGAAAAACTCTGTTCTCAAATTTTTCTCCAAACAAGT
ATGTGAGTTGGAATCCTAGGCGTTCAGATTTCCCACCTTCTGAAGAGATT
GATCCTATAAAGAGAACAGAGAGATCAAATCTCAAATTCTGGACTAGTCC
TACTTTTACTCTAGGTGGAGCACTTATAATTCTCTTATTTCTTTTGTTGT
ATACTCTTCAATCACCAATCAACAAGTAATTTGAATTATAGAATTTGGAA
ATTAAATAAATATTCG
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