GR396009
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR396009 vs. TrEMBL
Match: Q10N24_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0285100 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-18 Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKK+G+KTLFS FSPNKYVSWNPRRS++P SEE+DPI+RTERSNL WTSP Sbjct: 51 FKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101
BLAST of GR396009 vs. TrEMBL
Match: B8ALJ5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11067 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.362e-18 Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKK+G+KTLFS FSPNKYVSWNPRRS++P SEE+DPI+RTERSNL WTSP Sbjct: 51 FKKKGKKTLFSEFSPNKYVSWNPRRSEYPLSEEVDPIRRTERSNLMLWTSP 101
BLAST of GR396009 vs. TrEMBL
Match: B9SGS5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0819840 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.029e-18 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 F+KQG+KTLFS FSPNKYVSWNPRRS +P SEE+DPIKR ERSNL+ WTSP Sbjct: 25 FRKQGKKTLFSGFSPNKYVSWNPRRSKYPLSEEVDPIKRAERSNLELWTSP 75
BLAST of GR396009 vs. TrEMBL
Match: B6UCD1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.975e-18 Identity = 39/52 (75.00%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 146 RFKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 +FKK+G++TLFS+FSP+KYV+WNPRRS++P SEE+DPIKRTERSNL WTSP Sbjct: 48 KFKKKGKRTLFSDFSPDKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 99
BLAST of GR396009 vs. TrEMBL
Match: C5YN76_SORBI (Putative uncharacterized protein Sb07g024190 OS=Sorghum bicolor GN=Sb07g024190 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.531e-17 Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FK +G++TLFS+FSPNKYV+WNPRRS++P SEE+DPIKRTERSNL WTSP Sbjct: 50 FKNKGKRTLFSDFSPNKYVTWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 100
BLAST of GR396009 vs. TrEMBL
Match: C6TLP5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.611e-17 Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 2 Query: 50 KTLCSKRD--ESQTNGXXXXXXXXXXXXXXXXXXRFKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSPT 304 K +CS RD ESQ N +FKKQG K FS FS +KYVSWNP+RS+FP SEE+DPIKRTERSNL FW SPT Sbjct: 36 KPVCSNRDSKESQRNDDNNNKGDKFSTDWDKAWSKFKKQGGKKPFSKFS-DKYVSWNPKRSEFPLSEEVDPIKRTERSNLSFWNSPT 121
BLAST of GR396009 vs. TrEMBL
Match: D7TQ99_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025542001 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-17 Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 F+KQG+K LFS FSP+KYV+WNPRRS++P SEE+DPIKRTERSNL WTSP Sbjct: 70 FRKQGKKRLFSQFSPDKYVTWNPRRSNYPLSEEVDPIKRTERSNLMLWTSP 120
BLAST of GR396009 vs. TrEMBL
Match: B8A1D7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.454e-17 Identity = 38/51 (74.51%), Postives = 48/51 (94.12%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKK+G++TLFS+FSP+KYV+WNP+RS++P SEE+DPIKRTERSNL WTSP Sbjct: 57 FKKKGKRTLFSDFSPDKYVTWNPQRSEYPLSEEVDPIKRTERSNLMLWTSP 107
BLAST of GR396009 vs. TrEMBL
Match: B9IIY7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_256696 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.887e-16 Identity = 36/51 (70.59%), Postives = 45/51 (88.24%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 F+K+G+K FS FSPNKYV+WNP+RS++P SEE+DPIKR ERSNL+ WTSP Sbjct: 15 FRKKGKKAFFSQFSPNKYVTWNPKRSNYPLSEEVDPIKRAERSNLRLWTSP 65
BLAST of GR396009 vs. TrEMBL
Match: B6U691_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.401e-16 Identity = 37/51 (72.55%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKK+G++TLFS+FSP+KYV WNPRRS++P SEE+DPIKR+E SNL WTSP Sbjct: 49 FKKKGKRTLFSDFSPDKYVIWNPRRSEYPLSEEVDPIKRSEISNLMLWTSP 99
BLAST of GR396009 vs. TAIR peptide
Match: AT3G53470.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=135) HSP 1 Score: 81.6481 bits (200), Expect = 1.590e-16 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKKQ +K+LFS F+ +KYV+WNP RS+F SEE+DPIKRTERSNL WTSP Sbjct: 61 FKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 111
BLAST of GR396009 vs. TAIR peptide
Match: AT3G53470.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:19822813-19823298 FORWARD LENGTH=136) HSP 1 Score: 81.6481 bits (200), Expect = 1.590e-16 Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 149 FKKQGRKTLFSNFSPNKYVSWNPRRSDFPPSEEIDPIKRTERSNLKFWTSP 301 FKKQ +K+LFS F+ +KYV+WNP RS+F SEE+DPIKRTERSNL WTSP Sbjct: 62 FKKQSKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSP 112 The following BLAST results are available for this feature:
BLAST of GR396009 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR396009 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR396009 ID=GR396009; Name=GR396009; organism=Cicer arietinum; type=EST; length=416bpback to top |