GR408739

EST Overview


Name	GR408739
Unique Name	GR408739
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	640

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG1_ORYSJ (Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.912e-44
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ P+ ERVDEYGLG RESL+EAV+ VI++LGMQPCEGTEVVP N+RSHTCLLSGVFIGD KVLVRLSFGL G K+VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  778 FRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 884

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_ORYSJ (Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.379e-44
Identity = 86/107 (80.37%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+ P+ ERVDEYGLG RESL+EAV+ VI +LGMQPCEGT+VVP NSRSHTCLLSGVFIG+VKVLVRLSFGL G K+VAMKLAVRSDD  +SD IHEIVA+G
Sbjct:  783 FRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG 889

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG_ARATH (Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.060e-38
Identity = 76/107 (71.03%), Postives = 92/107 (85.98%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+  + ERVDEYGLG RESL EAV  V++LLGMQ CEGTE +P N+RSHTCLLSGV+IG+VKVLVR  FG+D +KD+AMKL VR++D +V++AIHEIVASG
Sbjct:  780 FRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSHTCLLSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAEDVSVAEAIHEIVASG 886

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_DANRE (Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.541e-16
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AW+ +G +CE+ + + L    +L EAVN +++ LGMQPCE ++ VP N  SH   L+GVF G   VLVR    L  A  V +++ VRS D+ V D I
Sbjct:  771 FAAAWDEVGDECEKEETFALATVRTLDEAVNNIVSFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLAL--ADGVTIQVTVRSTDDNVVDVI 868

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_XENTR (Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.392e-16
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AWE +G   E+ + + L   +SL EAVN +I  LGMQPCE ++ VP N  SH   LSGV+ G   VLVR    L  A  V M++ VRS DET ++ I
Sbjct:  770 FGAAWEEIGDTYEKEETFALTTTKSLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVYRGGHDVLVRSRLAL--ADGVTMQVTVRSQDETPANVI 867

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_TAKRU (Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.654e-16
Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AWE +G + E+ + + L    +L EAV  +I+ LGMQPCE ++ VP N  SH   L+GVF G   VLVR    L  A  V M++ VRS +ETV D I
Sbjct:  771 FGAAWEEVGDEFEKEETFALASVRTLDEAVGNIISFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLAL--ADGVTMQVTVRSSEETVVDVI 868

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_XENLA (Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.151e-15
Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  +WE +G   E+ + + L   ++L EAVN +I  LGMQPCE ++ VP N  SH   LSGVF G    LVR    L  A  V M++ VRS DET +D I
Sbjct:  770 FGASWEEVGDAYEKEETFALTTTKTLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVFRGGHDALVRSRLAL--ADGVTMQVTVRSQDETPADVI 867

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_HUMAN (Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.067e-14
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AWE +G   E+ + + L   ++L EAVN +I  LGMQPCE ++ VP N  SH+  L+G+F G   +LVR    L  A  V M++ VRS + T  D I
Sbjct:  769 FAAAWEEVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGIFRGGYDLLVRSRLAL--ADGVTMQVTVRSKERTPVDVI 866

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_MOUSE (Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.378e-14
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AWE +G   E+ + + L   ++L EAVN +I  LGMQPCE ++ VP N  SH+  L+GV+ G   +LVR    L  A  V M++ VRS + T  D I
Sbjct:  769 FAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLAL--ADGVTMQVTVRSKERTPVDVI 866

[Close]

BLAST of GR408739 vs. SwissProt
Match: COPG2_BOVIN (Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.056e-14
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAI 302
            F  AWE +G   E+ + + L   ++L EAVN +I  LGMQPCE ++ VP N  SH+  L+GV+ G   +LVR    L  A  V M++ VRS + T  D I
Sbjct:  769 FAAAWEEVGNTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLAL--ADGVTMQVTVRSKEGTPVDVI 866

[Close]

BLAST of GR408739 vs. TrEMBL
Match: D7TQ06_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031955001 PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.069e-47
Identity = 92/107 (85.98%), Postives = 104/107 (97.20%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+GP+ ERVDEYGLGPRESL+EAV+TVI+LLG+QPCEGTEVVP NSRSHTCLLSGVFIG++KVLVRLSFG+DG K+VAMKLAVRS+DE+VSDAIHEIVASG
Sbjct:  781 FRNAWESMGPEFERVDEYGLGPRESLAEAVSTVISLLGLQPCEGTEVVPSNSRSHTCLLSGVFIGNMKVLVRLSFGIDGPKEVAMKLAVRSEDESVSDAIHEIVASG 887

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B9RBE3_RICCO (Coatomer gamma subunit, putative OS=Ricinus communis GN=RCOM_1674930 PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.005e-46
Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+GPDCE VDEYGLG RESL+EAV+ VINLLGMQPCEGTEVVP NSRSHTC+LSGVFIG+VKVLV+L FG+DG K+VAMKLAVRS+DE+VSDAIHEIVASG
Sbjct:  781 FRNAWESMGPDCECVDEYGLGARESLAEAVSAVINLLGMQPCEGTEVVPSNSRSHTCVLSGVFIGNVKVLVQLQFGIDGPKEVAMKLAVRSEDESVSDAIHEIVASG 887

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B7ZZX2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.860e-43
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ PD ERVDEYGLG RESL+EAVN VIN+LGMQPCEGTEVVP N+RSHTCLLSGVFIG++KVLVRLSFGL G  +VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  539 FRNAWENMDPDSERVDEYGLGVRESLAEAVNAVINILGMQPCEGTEVVPKNARSHTCLLSGVFIGNMKVLVRLSFGLSGPNEVAMKLAVRSDDPEVSDKIHEIVASG 645

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B7ZXB7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.860e-43
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ PD ERVDEYGLG RESL+EAVN VIN+LGMQPCEGTEVVP N+RSHTCLLSGVFIG++KVLVRLSFGL G  +VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  793 FRNAWENMDPDSERVDEYGLGVRESLAEAVNAVINILGMQPCEGTEVVPKNARSHTCLLSGVFIGNMKVLVRLSFGLSGPNEVAMKLAVRSDDPEVSDKIHEIVASG 899

[Close]

BLAST of GR408739 vs. TrEMBL
Match: C5WRP5_SORBI (Putative uncharacterized protein Sb01g041860 OS=Sorghum bicolor GN=Sb01g041860 PE=4 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.069e-43
Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ P+ ERVDEYGLG RESL+EAVN VIN+LGMQPCEGTEVVP N+RSHTCLLSGVFIG+ KVLVRLSFGL G  +VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  792 FRNAWENMDPESERVDEYGLGVRESLAEAVNAVINILGMQPCEGTEVVPRNARSHTCLLSGVFIGNAKVLVRLSFGLSGPNEVAMKLAVRSDDSEVSDKIHEIVASG 898

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B9F6L0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_09998 PE=4 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.069e-43
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ P+ ERVDEYGLG RESL+EAV+ VI++LGMQPCEGTEVVP N+RSHTCLLSGVFIGD KVLVRLSFGL G K+VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  807 FRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 913

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B8AJK8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10600 PE=4 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.069e-43
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ P+ ERVDEYGLG RESL+EAV+ VI++LGMQPCEGTEVVP N+RSHTCLLSGVFIGD KVLVRLSFGL G K+VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  797 FRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 903

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B7EEW9_ORYSJ (cDNA clone:J013155G01, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.069e-43
Identity = 87/107 (81.31%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWE++ P+ ERVDEYGLG RESL+EAV+ VI++LGMQPCEGTEVVP N+RSHTCLLSGVFIGD KVLVRLSFGL G K+VAMKLAVRSDD  VSD IHEIVASG
Sbjct:  791 FRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSHTCLLSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDDPEVSDKIHEIVASG 897

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B9FW22_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_23473 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.206e-42
Identity = 86/107 (80.37%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+ P+ ERVDEYGLG RESL+EAV+ VI +LGMQPCEGT+VVP NSRSHTCLLSGVFIG+VKVLVRLSFGL G K+VAMKLAVRSDD  +SD IHEIVA+G
Sbjct:  783 FRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG 889

[Close]

BLAST of GR408739 vs. TrEMBL
Match: B8B874_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25286 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.206e-42
Identity = 86/107 (80.37%), Postives = 96/107 (89.72%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+ P+ ERVDEYGLG RESL+EAV+ VI +LGMQPCEGT+VVP NSRSHTCLLSGVFIG+VKVLVRLSFGL G K+VAMKLAVRSDD  +SD IHEIVA+G
Sbjct:  783 FRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSHTCLLSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDDPEISDKIHEIVANG 889

[Close]

BLAST of GR408739 vs. TAIR peptide
Match: AT4G34450.1 (| Symbols: | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | chr4:16471956-16476795 FORWARD LENGTH=886)

HSP 1 Score: 159.844 bits (403), Expect = 1.090e-39
Identity = 76/107 (71.03%), Postives = 92/107 (85.98%), Query Frame = 3

Query:    3 FRNAWESLGPDCERVDEYGLGPRESLSEAVNTVINLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            FRNAWES+  + ERVDEYGLG RESL EAV  V++LLGMQ CEGTE +P N+RSHTCLLSGV+IG+VKVLVR  FG+D +KD+AMKL VR++D +V++AIHEIVASG
Sbjct:  780 FRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSHTCLLSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAEDVSVAEAIHEIVASG 886

[Close]

BLAST of GR408739 vs. TAIR peptide
Match: AT2G16200.1 (| Symbols: | structural molecules | chr2:7024766-7025104 FORWARD LENGTH=69)

HSP 1 Score: 95.5153 bits (236), Expect = 2.523e-20
Identity = 43/69 (62.32%), Postives = 58/69 (84.06%), Query Frame = 3

Query:  117 MQPCEGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            MQ C+GTE V  N+RSHTCL SG++IG+VKVLV+  FG+D +K++ MKLAVR++D +VSDAIH +VA+G
Sbjct:    1 MQSCKGTETVASNARSHTCLPSGLYIGNVKVLVKAQFGMDSSKEIVMKLAVRAEDPSVSDAIHALVANG 69

[Close]

BLAST of GR408739 vs. TAIR peptide
Match: AT2G16200.2 (| Symbols: | structural molecules | chr2:7024660-7025104 FORWARD LENGTH=83)

HSP 1 Score: 88.5817 bits (218), Expect = 3.085e-18
Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = 3

Query:  129 EGTEVVPPNSRSHTCLLSGVFIGDVKVLVRLSFGLDGAKDVAMKLAVRSDDETVSDAIHEIVASG 323
            +GTE V  N+RSHTCL SG++IG+VKVLV+  FG+D +K++ MKLAVR++D +VSDAIH +VA+G
Sbjct:   19 KGTETVASNARSHTCLPSGLYIGNVKVLVKAQFGMDSSKEIVMKLAVRAEDPSVSDAIHALVANG 83

The following BLAST results are available for this feature:

BLAST of GR408739 vs. SwissProt
BLAST of GR408739 vs. TrEMBL
BLAST of GR408739 vs. TAIR peptide

BLAST of GR408739 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
COPG1_ORYSJ	4.912e-44	81.31	Coatomer subunit gamma-1 OS=Oryza sativa subsp. ja...	[more]
COPG2_ORYSJ	8.379e-44	80.37	Coatomer subunit gamma-2 OS=Oryza sativa subsp. ja...	[more]
COPG_ARATH	1.060e-38	71.03	Coatomer subunit gamma OS=Arabidopsis thaliana GN=...	[more]
COPG2_DANRE	2.541e-16	43.00	Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 P...	[more]
COPG2_XENTR	7.392e-16	46.00	Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=...	[more]
COPG2_TAKRU	9.654e-16	45.00	Coatomer subunit gamma-2 OS=Takifugu rubripes GN=c...	[more]
COPG2_XENLA	2.151e-15	45.00	Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg...	[more]
COPG2_HUMAN	1.067e-14	42.00	Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 ...	[more]
COPG2_MOUSE	2.378e-14	42.00	Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 ...	[more]
COPG2_BOVIN	4.056e-14	42.00	Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE...	[more]

BLAST of GR408739 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TQ06_VITVI	8.069e-47	85.98	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RBE3_RICCO	4.005e-46	85.05	Coatomer gamma subunit, putative OS=Ricinus commun...	[more]
B7ZZX2_MAIZE	1.860e-43	82.24	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B7ZXB7_MAIZE	1.860e-43	82.24	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C5WRP5_SORBI	7.069e-43	81.31	Putative uncharacterized protein Sb01g041860 OS=So...	[more]
B9F6L0_ORYSJ	7.069e-43	81.31	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AJK8_ORYSI	7.069e-43	81.31	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B7EEW9_ORYSJ	7.069e-43	81.31	cDNA clone:J013155G01, full insert sequence OS=Ory...	[more]
B9FW22_ORYSJ	1.206e-42	80.37	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8B874_ORYSI	1.206e-42	80.37	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR408739 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G34450.1	1.090e-39	71.03	\| Symbols: \| coatomer gamma-2 subunit, putative /...	[more]
AT2G16200.1	2.523e-20	62.32	\| Symbols: \| structural molecules \| chr2:7024766-...	[more]
AT2G16200.2	3.085e-18	61.54	\| Symbols: \| structural molecules \| chr2:7024660-...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009028	Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain	SUPERFAMILY	55711	Subdomain of clathrin and coatomer appendage domain	coord: 1..104 score: 7.2
IPR014863	Coatomer, gamma subunit , appendage	PFAM	PF08752	Gamma-COP	coord: 1..104 score: 1.4
IPR015873	Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain	GENE3D	3.30.310.30	no description	coord: 1..104 score: 1.7
None	No IPR available	PANTHER	PTHR10261	COATOMER GAMMA SUBUNIT	coord: 1..104 score: 1.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR408739 ID=GR408739; Name=GR408739; organism=Cicer arietinum; type=EST; length=640bp
ATTTCAGGAATGCATGGGAAAGCTTGGGCCCTGATTGTGAAAGAGTGGAT
GAATATGGTCTTGGCCCAAGGGAAAGCTTATCCGAAGCTGTAAATACTGT
CATCAATCTTCTTGGCATGCAACCTTGTGAGGGCACAGAGGTAGTCCCAC
CTAATTCAAGGTCACACACATGCTTATTGTCGGGTGTATTTATAGGGGAT
GTGAAGGTACTCGTGCGGTTGTCTTTTGGACTTGATGGTGCAAAAGATGT
TGCAATGAAACTGGCTGTCAGATCCGATGATGAAACTGTCAGCGATGCCA
TCCATGAGATTGTAGCAAGCGGCTAGTTCAATCAAGTCAAGATATGTTGA
TTCAAGCAGCCTGAGTTTGTGTTATCGTGATTGGAATTAAACGGCCCCAT
AGATAGGTGTGTGTAAAGAATTTCTAAAGTGTACGCTTGGGCTTGGTATA
TGCAATTTATTTGTCATTCACTGCATGCGTGTTAGACCAGCAACAATACC
CAGAAGTATCGCTGTCGGATTTATTAGAGTAAAGTTCCATAGTCATAATT
ATACTTCATTTCTTTGTAGCAAATGTATTATGAATTTTGATAATTTTCCA
TAAAATTTGTTTTATCAATGAATTGGATATTTGTTAAATA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005198	structural molecule activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030117	membrane coat
GO:0005798	Golgi-associated vesicle

Vocabulary: **INTERPRO**
Term	Definition
IPR009028	Coatomer/calthrin_app_sub_C
IPR014863	Coatomer, gamma subunit , appendage
IPR015873	Clathrin_a/coatomer_app_sub_C

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