GR408861
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR408861 vs. SwissProt
Match: C3H38_ARATH (Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana GN=At3g18640 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.177e-11 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = -2 Query: 354 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQNS 605 KG F+ +E EL++P K ++ + YK +V+K +KV+G Q Q QEKIDHYLS S PKLTKLV AYV K++ + Sbjct: 593 KGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQEKIDHYLSASKPKLTKLVQAYVGKIKKT 676
BLAST of GR408861 vs. TrEMBL
Match: B9SNT0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1278130 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.451e-14 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = -2 Query: 360 LKGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQ 608 +KG F+ +EF +L++P K Q+ + YK +V+K VDKV+G QG Q QEKI YLSFS PKLTKLV AYVEK+Q Sbjct: 801 VKGIRAFKFALVEFVKDLLKPAWKEGQMSKDAYKNIVKKVVDKVTGTMQGASIPQTQEKIQQYLSFSKPKLTKLVQAYVEKLQ 883
BLAST of GR408861 vs. TrEMBL
Match: A5BL82_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013331 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.405e-12 Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = -2 Query: 354 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQNS 605 KG F+ +EF E+++P K Q+ E +K +V+K VDKV+G QG + QEKIDHYLS+S PKLTKLV AYVEK S Sbjct: 830 KGMRIFKNALVEFVKEILKPTWKEGQMSREVHKTIVKKVVDKVTGTIQGEHVPKTQEKIDHYLSYSKPKLTKLVQAYVEKFLKS 913
BLAST of GR408861 vs. TrEMBL
Match: D7KD69_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_681864 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.974e-12 Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = -2 Query: 354 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQNS 605 KG F+ +E EL++P K + + YK +V+K VDKV+GA Q Q QEKIDHYLS S PKLTKLV AYV KV+ S Sbjct: 652 KGMRAFKFALVEIVKELLKPAWKEGGMNKDAYKNIVKKVVDKVTGAIQTGNIPQTQEKIDHYLSASKPKLTKLVQAYVSKVKKS 735
BLAST of GR408861 vs. TrEMBL
Match: B9H468_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_759960 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.711e-11 Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = -2 Query: 360 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQ 605 KG F+ +EF +L++P K Q+ + YK +V+K VDKV+G QEKI+ YLS S PKLTKLV AYVEK Q Sbjct: 774 KGNRAFKFALVEFVKDLLKPAWKEGQISKDAYKNIVKKVVDKVTGTMHSASIPTTQEKIEQYLSVSKPKLTKLVQAYVEKFQ 855
BLAST of GR408861 vs. TrEMBL
Match: D7L932_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_898233 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.243e-10 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = -2 Query: 354 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQNS 605 KG F+ +E EL++P K ++ + YK +V+K +KV+G+ Q Q QEKIDHYLS + PKLTKLV AY+ K++ + Sbjct: 602 KGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGSMQSGNVPQTQEKIDHYLSAAKPKLTKLVQAYISKIKKT 685
BLAST of GR408861 vs. TrEMBL
Match: A5BTP6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031553 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 7.217e-9 Identity = 37/87 (42.53%), Postives = 48/87 (55.17%), Query Frame = -2 Query: 357 SGGLKGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQN 617 S K F+ +EF L+ P K Q+ E YK +V+K DKV +G + Q+KID YLS S PK+ KLV AYVEK Q+ Sbjct: 257 SNDAKAMVAFKFQLVEFVKVLLSPTWKQGQLSKEAYKNIVKKVADKVIATIEGPYIPRTQQKIDQYLSLSKPKIAKLVQAYVEKFQS 343
BLAST of GR408861 vs. TrEMBL
Match: B9HEQ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562448 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.778e-7 Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = -2 Query: 384 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLV 605 KG F+ +EF +L++P K Q+ + YK +V+K VDKV+G Q QEKI+ YL S PKLTKLV Sbjct: 798 KGSRAFKFALVEFVKDLLKPAWKEGQMSKDAYKNIVKKVVDKVTGTMQSASIPTTQEKIEQYLLVSKPKLTKLV 871
BLAST of GR408861 vs. TrEMBL
Match: D7SIK8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008114001 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 8.822e-7 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = -2 Query: 366 FRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEK 590 F++ +F E+++P + + E +K +V+K VDKVSGA + + Q KI+HY+ S KLTKLV+ YV+K Sbjct: 1077 FKVALADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMKSHQIPKSQAKINHYIDSSQRKLTKLVMGYVDK 1151
BLAST of GR408861 vs. TAIR peptide
Match: AT3G18640.1 (| Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr3:6413617-6415829 REVERSE LENGTH=676) HSP 1 Score: 70.0922 bits (170), Expect = 1.214e-12 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = -2 Query: 354 KGFGPFRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEKVQNS 605 KG F+ +E EL++P K ++ + YK +V+K +KV+G Q Q QEKIDHYLS S PKLTKLV AYV K++ + Sbjct: 593 KGMRAFKFALVEVVKELLKPAWKEGKLNKDGYKNIVKKVAEKVTGTMQSGNVPQTQEKIDHYLSASKPKLTKLVQAYVGKIKKT 676
BLAST of GR408861 vs. TAIR peptide
Match: AT3G26850.2 (| Symbols: | histone-lysine N-methyltransferases | chr3:9896541-9897415 REVERSE LENGTH=265) HSP 1 Score: 52.373 bits (124), Expect = 2.619e-7 Identity = 27/75 (36.00%), Postives = 46/75 (61.33%), Query Frame = -2 Query: 366 FRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEK 590 F++ +F +L++P + + E +K +V++ VDKVS + +G + + KID Y+ S KLTKLV+ YV+K Sbjct: 187 FKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLVMGYVDK 261
BLAST of GR408861 vs. TAIR peptide
Match: AT3G26850.1 (| Symbols: | histone-lysine N-methyltransferases | chr3:9896541-9897415 REVERSE LENGTH=265) HSP 1 Score: 52.373 bits (124), Expect = 2.619e-7 Identity = 27/75 (36.00%), Postives = 46/75 (61.33%), Query Frame = -2 Query: 366 FRLGWLEFF*ELVEPP*KGVQVLDEDYKPVVRKFVDKVSGARQGTIFFQPQEKIDHYLSFSNPKLTKLVLAYVEK 590 F++ +F +L++P + + E +K +V++ VDKVS + +G + + KID Y+ S KLTKLV+ YV+K Sbjct: 187 FKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKIDKYIDSSQQKLTKLVMGYVDK 261 The following BLAST results are available for this feature:
BLAST of GR408861 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR408861 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 8
BLAST of GR408861 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR408861 ID=GR408861; Name=GR408861; organism=Cicer arietinum; type=EST; length=663bpback to top |