GR409879
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR409879 vs. TrEMBL
Match: A9PAP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821334 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.026e-12 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = -1 Query: 167 EQSVPPCHSCESVYSRDCC--HSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLS 346 E + P + S+ D C HS+ FQDC+NNFGN++SKCQFYMDMLAECRKNSGS LS Sbjct: 87 EAAAPSAPAASSMGGADACNIHSKA---FQDCVNNFGNDISKCQFYMDMLAECRKNSGSMLS 145
BLAST of GR409879 vs. TrEMBL
Match: A9PDV5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_706648 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.452e-10 Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = -1 Query: 170 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSL 355 V E + + S+ D C+ FQDC+NNFGN++SKCQFYMDML ECRKNSGS L Sbjct: 84 VVSEAAAAAAPTASSMGGADACNIHTK-AFQDCVNNFGNDISKCQFYMDMLTECRKNSGSML 144
BLAST of GR409879 vs. TrEMBL
Match: C6T0M8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.896e-10 Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = -1 Query: 164 FQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLSM 268 FQDC+N +GN++SKCQFYMDMLAECRKNSG++LSM Sbjct: 107 FQDCLNGYGNDISKCQFYMDMLAECRKNSGATLSM 141
BLAST of GR409879 vs. TrEMBL
Match: C6SWP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.229e-9 Identity = 27/35 (77.14%), Postives = 35/35 (100.00%), Query Frame = -1 Query: 164 FQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLSM 268 FQDC+N++G+++SKCQFYMDMLAECRKNSG+SLS+ Sbjct: 107 FQDCLNSYGSDLSKCQFYMDMLAECRKNSGASLSV 141
BLAST of GR409879 vs. TrEMBL
Match: A5BAI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019019 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.097e-9 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = -1 Query: 167 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLS 355 V S P + S+ D C + FQDC+N+ G+++SKCQFYMDML+ECR+NSG++LS Sbjct: 82 VVSSXSAAPTPTTNSIGGSDACGTHAK-AFQDCLNSLGSDISKCQFYMDMLSECRRNSGATLS 143
BLAST of GR409879 vs. TrEMBL
Match: B9RRN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1648660 PE=4 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.577e-9 Identity = 30/41 (73.17%), Postives = 30/41 (73.17%), Query Frame = -2 Query: 457 RWVHESDEVALTTEPCLFVGVNWMIGPRAAPFSPHSPFPKI 579 RWV ES EVAL TEPCL VG NWMIGPR PHSPFP I Sbjct: 12 RWVDESAEVALPTEPCLPVGANWMIGPRTGLSFPHSPFPNI 52
BLAST of GR409879 vs. TrEMBL
Match: D7U673_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012539001 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.101e-9 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = -1 Query: 170 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSL 355 VA E + + +V D C++ FQDC+N+ G+++SKCQFYMDML+ECR+NSGS L Sbjct: 83 VASEAAASSAPTMNNVGGSDACNAHSK-AFQDCLNSSGSDISKCQFYMDMLSECRRNSGSML 143
BLAST of GR409879 vs. TrEMBL
Match: Q9LXC2_ARATH (At5g09570 OS=Arabidopsis thaliana GN=F17I14_240 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.775e-8 Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1 Query: 176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268 FQDC+N+FG+++SKCQFYMDML+EC+KNSGS Sbjct: 105 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 135
BLAST of GR409879 vs. TrEMBL
Match: D7M252_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908906 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.775e-8 Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1 Query: 176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268 FQDC+N+FG+++SKCQFYMDML+EC+KNSGS Sbjct: 86 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 116
BLAST of GR409879 vs. TrEMBL
Match: Q9FME9_ARATH (Emb|CAB89373.1 OS=Arabidopsis thaliana GN=At5g64400 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.028e-8 Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = -1 Query: 176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268 FQDCI ++G+E+SKCQFYMDML+ECRKNSGS Sbjct: 110 FQDCIGSYGSEISKCQFYMDMLSECRKNSGS 140
BLAST of GR409879 vs. TAIR peptide
Match: AT5G09570.1 (| Symbols: | Cox19-like CHCH family protein | chr5:2970733-2971970 FORWARD LENGTH=139) HSP 1 Score: 63.1586 bits (152), Expect = 1.304e-10 Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1 Query: 176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268 FQDC+N+FG+++SKCQFYMDML+EC+KNSGS Sbjct: 105 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 135
BLAST of GR409879 vs. TAIR peptide
Match: AT5G64400.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25748922-25750182 FORWARD LENGTH=144) HSP 1 Score: 62.3882 bits (150), Expect = 2.225e-10 Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = -1 Query: 176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268 FQDCI ++G+E+SKCQFYMDML+ECRKNSGS Sbjct: 110 FQDCIGSYGSEISKCQFYMDMLSECRKNSGS 140 The following BLAST results are available for this feature:
BLAST of GR409879 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR409879 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR409879 ID=GR409879; Name=GR409879; organism=Cicer arietinum; type=EST; length=616bpback to top |