GR409879

EST Overview
NameGR409879
Unique NameGR409879
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length616
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR409879 vs. TrEMBL
Match: A9PAP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821334 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.026e-12
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = -1
Query:  167 EQSVPPCHSCESVYSRDCC--HSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLS 346
            E + P   +  S+   D C  HS+    FQDC+NNFGN++SKCQFYMDMLAECRKNSGS LS
Sbjct:   87 EAAAPSAPAASSMGGADACNIHSKA---FQDCVNNFGNDISKCQFYMDMLAECRKNSGSMLS 145          
BLAST of GR409879 vs. TrEMBL
Match: A9PDV5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_706648 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.452e-10
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = -1
Query:  170 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSL 355
            V  E +     +  S+   D C+      FQDC+NNFGN++SKCQFYMDML ECRKNSGS L
Sbjct:   84 VVSEAAAAAAPTASSMGGADACNIHTK-AFQDCVNNFGNDISKCQFYMDMLTECRKNSGSML 144          
BLAST of GR409879 vs. TrEMBL
Match: C6T0M8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.896e-10
Identity = 28/35 (80.00%), Postives = 34/35 (97.14%), Query Frame = -1
Query:  164 FQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLSM 268
            FQDC+N +GN++SKCQFYMDMLAECRKNSG++LSM
Sbjct:  107 FQDCLNGYGNDISKCQFYMDMLAECRKNSGATLSM 141          
BLAST of GR409879 vs. TrEMBL
Match: C6SWP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.229e-9
Identity = 27/35 (77.14%), Postives = 35/35 (100.00%), Query Frame = -1
Query:  164 FQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLSM 268
            FQDC+N++G+++SKCQFYMDMLAECRKNSG+SLS+
Sbjct:  107 FQDCLNSYGSDLSKCQFYMDMLAECRKNSGASLSV 141          
BLAST of GR409879 vs. TrEMBL
Match: A5BAI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019019 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.097e-9
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = -1
Query:  167 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSLS 355
            V    S  P  +  S+   D C +     FQDC+N+ G+++SKCQFYMDML+ECR+NSG++LS
Sbjct:   82 VVSSXSAAPTPTTNSIGGSDACGTHAK-AFQDCLNSLGSDISKCQFYMDMLSECRRNSGATLS 143          
BLAST of GR409879 vs. TrEMBL
Match: B9RRN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1648660 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.577e-9
Identity = 30/41 (73.17%), Postives = 30/41 (73.17%), Query Frame = -2
Query:  457 RWVHESDEVALTTEPCLFVGVNWMIGPRAAPFSPHSPFPKI 579
            RWV ES EVAL TEPCL VG NWMIGPR     PHSPFP I
Sbjct:   12 RWVDESAEVALPTEPCLPVGANWMIGPRTGLSFPHSPFPNI 52          
BLAST of GR409879 vs. TrEMBL
Match: D7U673_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_114.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012539001 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.101e-9
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = -1
Query:  170 VAREQSVPPCHSCESVYSRDCCHSQQG*NFQDCINNFGNEVSKCQFYMDMLAECRKNSGSSL 355
            VA E +     +  +V   D C++     FQDC+N+ G+++SKCQFYMDML+ECR+NSGS L
Sbjct:   83 VASEAAASSAPTMNNVGGSDACNAHSK-AFQDCLNSSGSDISKCQFYMDMLSECRRNSGSML 143          
BLAST of GR409879 vs. TrEMBL
Match: Q9LXC2_ARATH (At5g09570 OS=Arabidopsis thaliana GN=F17I14_240 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.775e-8
Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1
Query:  176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268
            FQDC+N+FG+++SKCQFYMDML+EC+KNSGS
Sbjct:  105 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 135          
BLAST of GR409879 vs. TrEMBL
Match: D7M252_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908906 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.775e-8
Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1
Query:  176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268
            FQDC+N+FG+++SKCQFYMDML+EC+KNSGS
Sbjct:   86 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 116          
BLAST of GR409879 vs. TrEMBL
Match: Q9FME9_ARATH (Emb|CAB89373.1 OS=Arabidopsis thaliana GN=At5g64400 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 3.028e-8
Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = -1
Query:  176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268
            FQDCI ++G+E+SKCQFYMDML+ECRKNSGS
Sbjct:  110 FQDCIGSYGSEISKCQFYMDMLSECRKNSGS 140          
BLAST of GR409879 vs. TAIR peptide
Match: AT5G09570.1 (| Symbols: | Cox19-like CHCH family protein | chr5:2970733-2971970 FORWARD LENGTH=139)

HSP 1 Score: 63.1586 bits (152), Expect = 1.304e-10
Identity = 24/31 (77.42%), Postives = 31/31 (100.00%), Query Frame = -1
Query:  176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268
            FQDC+N+FG+++SKCQFYMDML+EC+KNSGS
Sbjct:  105 FQDCVNHFGSDISKCQFYMDMLSECKKNSGS 135          
BLAST of GR409879 vs. TAIR peptide
Match: AT5G64400.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:25748922-25750182 FORWARD LENGTH=144)

HSP 1 Score: 62.3882 bits (150), Expect = 2.225e-10
Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = -1
Query:  176 FQDCINNFGNEVSKCQFYMDMLAECRKNSGS 268
            FQDCI ++G+E+SKCQFYMDML+ECRKNSGS
Sbjct:  110 FQDCIGSYGSEISKCQFYMDMLSECRKNSGS 140          
The following BLAST results are available for this feature:
BLAST of GR409879 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A9PAP4_POPTR2.026e-1259.68Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PDV5_POPTR1.452e-1053.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6T0M8_SOYBN1.896e-1080.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6SWP3_SOYBN1.229e-977.14Putative uncharacterized protein OS=Glycine max PE... [more]
A5BAI7_VITVI2.097e-947.62Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RRN3_RICCO3.577e-973.17Putative uncharacterized protein OS=Ricinus commun... [more]
D7U673_VITVI6.101e-948.39Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LXC2_ARATH1.775e-877.42At5g09570 OS=Arabidopsis thaliana GN=F17I14_240 PE... [more]
D7M252_ARALY1.775e-877.42Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9FME9_ARATH3.028e-880.65Emb|CAB89373.1 OS=Arabidopsis thaliana GN=At5g6440... [more]
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BLAST of GR409879 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G09570.11.304e-1077.42| Symbols: | Cox19-like CHCH family protein | chr... [more]
AT5G64400.12.225e-1080.65| Symbols: | CONTAINS InterPro DOMAIN/s: CHCH (In... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409879 ID=GR409879; Name=GR409879; organism=Cicer arietinum; type=EST; length=616bp
TTAAGACCAAACAATTATAATTTTCAAATATCAATAAGAAATAGAACAGT
ATATTGATGCAACATTCACTTCAGTGGGTCATCAGACAAATCGAATTTAT
TGAAATCATATCTTTTGCCACATTTGCAGTTGTGACCATCCAAAACATGA
CAAAGGGCAATTACATACTCAATGAGGATCCAGAGTTCTTTCTGCATTCT
GCTAGCATATCCATGTAAAACTGGCACTTGCTGACCTCATTTCCAAAGTT
GTTAATGCAATCCTGGAAGTTTCAACCTTGTTGACTATGACAACAGTCGC
GACTATAAACAGACTCGCAACTATGGCAGGGGGGTACGCTCTGCTCTCTC
GCGACCCCTACTCTAACGAGTAAGCAAGTAAACTACCTTTTGAAGCGCCA
GTCGCGTAGGGCGACCGGGCCAGGCCGAGTCAAAAAGGCTTTGATGACTC
AAGGTTAATCTTAGGGAAAGGAGAGTGAGGGGAAAAGGGGGCAGCCCTCG
GCCCGATCATCCAATTCACTCCAACAAACAGGCATGGTTCTGTAGTCAAA
GCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGCT
TCCTTAGGGACCGATT
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