GR912300

EST Overview


Name	GR912300
Unique Name	GR912300
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	413

Libraries


Library Name	Type
LIBEST_024968 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. JG-62) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_SOLLC (Shikimate kinase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.321e-22
Identity = 54/128 (42.19%), Postives = 85/128 (66.41%), Query Frame = 2

Query:   47 PSGSIR-PEKFGIRPAFSLS-----RPGNIRFIRRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            PSG +R  EK+  +P   +      +P       RR+  ++VSCS  N+ AS+L+S   +  ++E   LKN++++++ YL+GRC+Y+VGMMG GKTTVG+I+++ L YSF DCD L+E+ VG  +VA+
Sbjct:   24 PSGLLRFSEKWNEKPRHRVVVSCHLQPRKAAHSDRRVQ-LKVSCSPQNVQASVLESGCFSASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGITVAE 150

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_ARATH (Shikimate kinase, chloroplastic OS=Arabidopsis thaliana GN=At2g21940 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.782e-21
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_PROMA (Shikimate kinase OS=Prochlorococcus marinus GN=aroK PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.751e-7
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 2

Query:  236 KNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVA 409
            K R  Q+   L GR IY+VGMMGSGK+T G  ++++L YSF D D L+ E+V  +SV+
Sbjct:    4 KLRPNQVIKKLGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELI-EKVAKSSVS 60

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_SYNSC (Shikimate kinase OS=Synechococcus sp. (strain CC9605) GN=aroK PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.900e-7
Identity = 21/57 (36.84%), Postives = 39/57 (68.42%), Query Frame = 2

Query:  230 ILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGAN 400
            ++ + +  ++  L+GR +Y+VGMMGSGKT+ G+ +++ L Y F D D ++E+  G +
Sbjct:    8 VMADSTPTLKKRLSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAAGCS 64

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_SYNP6 (Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=aroK PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.094e-7
Identity = 21/43 (48.84%), Postives = 34/43 (79.07%), Query Frame = 2

Query:  266 LNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVG 394
            LNG  +++VG+MGSGKTT+GK++++ L Y++ D D+L+E   G
Sbjct:    7 LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG 49

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_SYNE7 (Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=aroK PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 5.094e-7
Identity = 21/43 (48.84%), Postives = 34/43 (79.07%), Query Frame = 2

Query:  266 LNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVG 394
            LNG  +++VG+MGSGKTT+GK++++ L Y++ D D+L+E   G
Sbjct:    7 LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG 49

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_SYNPX (Shikimate kinase OS=Synechococcus sp. (strain WH8102) GN=aroK PE=3 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 6.652e-7
Identity = 21/56 (37.50%), Postives = 37/56 (66.07%), Query Frame = 2

Query:  233 LKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGAN 400
            + + +  ++  L GR +Y+VGMMGSGKT+ G+ +++ L Y F D D ++E+  G +
Sbjct:    1 MSDATLSLKQRLGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQAAGCS 56

[Close]

BLAST of GR912300 vs. SwissProt
Match: AROK_CYAP8 (Shikimate kinase OS=Cyanothece sp. (strain PCC 8801) GN=aroK PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.688e-7
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 2

Query:  257 QPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVE 382
            Q  L G  IY++GMMGSGK+T+GKI++Q L Y F D D L+E
Sbjct:    4 QKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIE 45

[Close]

BLAST of GR912300 vs. TrEMBL
Match: C6THS3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.880e-40
Identity = 90/144 (62.50%), Postives = 102/144 (70.83%), Query Frame = 2

Query:   17 MDAKAVQTLNPSGSIRPEKFGIRPAFSLSRPGNIR------------FIRRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            MD KA Q L  S  ++PE+FG RP FS  R G  R             +RRR   +EVS SY+NI ASIL+S   + PL+EELILKNRSQ+ QPYLNGRCIY+VGMMGSGKTTVGKI+SQVL YSFCD D LVEEEVG NSV D
Sbjct:    1 MDVKAAQRLQLSAVVQPERFGRRPPFSTCRLGVSREPQSLRVFVSPMMMRRRTTALEVSSSYDNISASILESGSVHAPLDEELILKNRSQETQPYLNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVD 144

[Close]

BLAST of GR912300 vs. TrEMBL
Match: Q30CZ9_FAGSY (Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.213e-30
Identity = 63/93 (67.74%), Postives = 81/93 (87.10%), Query Frame = 2

Query:  134 RIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            + A +EVSCSY N PAS+L+S G + P ++ LILKN+SQ+I+PYL+GRCIY+VGMMGSGKTTVGK++SQVLSY+F D DTLVE++V ANSVA+
Sbjct:   59 KTASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLSYAFFDSDTLVEQDVDANSVAE 151

[Close]

BLAST of GR912300 vs. TrEMBL
Match: B9T204_RICCO (Shikimate kinase, chloroplast, putative OS=Ricinus communis GN=RCOM_0210250 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.634e-28
Identity = 57/88 (64.77%), Postives = 73/88 (82.95%), Query Frame = 2

Query:  149 EVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            EVSCSY N P S+L+S   +   +E LILKN+SQ ++PYL+GRCIY+VGMMGSGKTTVGK++SQVL YSFCDCD+L+E++V   SVA+
Sbjct:   65 EVSCSYKNSPVSVLESGSLHASSDESLILKNKSQVVEPYLSGRCIYLVGMMGSGKTTVGKVLSQVLGYSFCDCDSLIEQDVDGTSVAE 152

[Close]

BLAST of GR912300 vs. TrEMBL
Match: B9H5B3_POPTR (Shikimate kinase (Fragment) OS=Populus trichocarpa GN=SK2 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.611e-28
Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEE-LILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            R R+A  EVS SYNN   S L+SE     L++E LILKN+SQ+I+PYLNGRCIY+VGMMGSGKTTVGKI+SQ + YSFCD DTLVE++VG  SVA+
Sbjct:   57 RHRLASFEVSRSYNNSRVSTLESESLQDLLDDEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSQAIHYSFCDSDTLVEKDVGVTSVAE 152

[Close]

BLAST of GR912300 vs. TrEMBL
Match: B9HG21_POPTR (Shikimate kinase OS=Populus trichocarpa GN=SK3 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.652e-27
Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEG-RNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            R R A  EVSCS NN   S L+SE  +++  EE LILKN+SQ+I+PYLNGRCIY+VGMMGSGKTTVGKI+S+ + YSFCDCD LVE++VG  SVA+
Sbjct:   57 RHRQASFEVSCSCNNSQVSTLESESLQDLFGEEALILKNKSQEIEPYLNGRCIYLVGMMGSGKTTVGKILSRSIRYSFCDCDKLVEQDVGVPSVAE 152

[Close]

BLAST of GR912300 vs. TrEMBL
Match: B9VU88_VITVI (Shikimate kinase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.812e-26
Identity = 71/148 (47.97%), Postives = 90/148 (60.81%), Query Frame = 2

Query:   17 MDAKAVQTLNPSGSIRPEKFGIRPAFSL----------SRPGNIRFIRRRIA------PMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            M+AK    +  S  I  +KF  RP+ SL            P +  F  RR +       +E S SY N PA IL+S      L+E LILKN+SQ+I PY++GRC+Y+VGMMGSGKTT+GKI+S+VL YSFCD DTLVE  V   SVA+
Sbjct:    1 MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAE 148

[Close]

BLAST of GR912300 vs. TrEMBL
Match: A5AZY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038221 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.812e-26
Identity = 71/148 (47.97%), Postives = 90/148 (60.81%), Query Frame = 2

Query:   17 MDAKAVQTLNPSGSIRPEKFGIRPAFSL----------SRPGNIRFIRRRIA------PMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            M+AK    +  S  I  +KF  RP+ SL            P +  F  RR +       +E S SY N PA IL+S      L+E LILKN+SQ+I PY++GRC+Y+VGMMGSGKTT+GKI+S+VL YSFCD DTLVE  V   SVA+
Sbjct:    1 MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHPISCHFQPRRTSNWQKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAE 148

[Close]

BLAST of GR912300 vs. TrEMBL
Match: C6TLJ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.995e-26
Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 2

Query:  125 IRRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            IRRR A + V+CS+NNIPAS L+    +  +EE+LILK +SQ+I+PYL+GRCIY+VGMM SGKTTVG+I+S+ LSYSF D D LV +EVG  SV D
Sbjct:   56 IRRRTASLVVACSHNNIPASALEYGSFHSSVEEKLILKIKSQEIEPYLSGRCIYLVGMMASGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTD 151

[Close]

BLAST of GR912300 vs. TrEMBL
Match: D0VBC3_VITVI (Shikimate kinase 02 (Fragment) OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.615e-25
Identity = 69/148 (46.62%), Postives = 88/148 (59.46%), Query Frame = 2

Query:   17 MDAKAVQTLNPSGSIRPEKFGIRPAFSL----------SRPGNIRFIRRRIA------PMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            M+AK    +  S  I  +KF  RP+ SL            P +  F  RR +       +E S S  N PA IL+S      L+E LILKN+SQ+I PY++GRC+Y+VGMMGSGKTT+GKI+ +VL YSFCD DTLVE  V   SVA+
Sbjct:    1 MEAKIALKMQFSACIDTDKFARRPSVSLPFSQKLREQHGHPISYHFQPRRTSNWQKHVALEASGSCRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILPEVLGYSFCDSDTLVELAVKGTSVAE 148

[Close]

BLAST of GR912300 vs. TrEMBL
Match: A8MRG1_ARATH (Uncharacterized protein At2g21940.3 OS=Arabidopsis thaliana GN=At2g21940 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.647e-20
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT2G21940.4 (| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=304)

HSP 1 Score: 101.293 bits (251), Expect = 1.899e-22
Identity = 50/95 (52.63%), Postives = 74/95 (77.89%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN   ++L++ G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNNSSGALLET-GSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 149

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT2G21940.5 (| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303)

HSP 1 Score: 100.523 bits (249), Expect = 3.239e-22
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT2G21940.3 (| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352622 FORWARD LENGTH=276)

HSP 1 Score: 100.523 bits (249), Expect = 3.239e-22
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT2G21940.2 (| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303)

HSP 1 Score: 100.523 bits (249), Expect = 3.239e-22
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT2G21940.1 (| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303)

HSP 1 Score: 100.523 bits (249), Expect = 3.239e-22
Identity = 51/95 (53.68%), Postives = 72/95 (75.79%), Query Frame = 2

Query:  128 RRRIAPMEVSCSYNNIPASILKSEGRNVPLEEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            RR ++P  VSCS NN  +S L   G   P +E+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGK++S+VL Y+F DCDTL+E+ +   SVA+
Sbjct:   58 RRAVSPA-VSCSDNN--SSALLETGSVYPFDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT4G39540.2 (| Symbols: SK2, ATSK2 | shikimate kinase 2 | chr4:18378561-18380253 FORWARD LENGTH=300)

HSP 1 Score: 87.8113 bits (216), Expect = 2.173e-18
Identity = 38/65 (58.46%), Postives = 55/65 (84.62%), Query Frame = 2

Query:  218 EEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            EE+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGKI+++ L Y+F DCDTL+E+ +   SVA+
Sbjct:   80 EEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAE 144

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT4G39540.1 (| Symbols: SK2, ATSK2 | shikimate kinase 2 | chr4:18378561-18380253 FORWARD LENGTH=300)

HSP 1 Score: 87.8113 bits (216), Expect = 2.173e-18
Identity = 38/65 (58.46%), Postives = 55/65 (84.62%), Query Frame = 2

Query:  218 EEELILKNRSQQIQPYLNGRCIYVVGMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            EE+ ILK ++++++PYLNGR +Y+VGMMGSGKTTVGKI+++ L Y+F DCDTL+E+ +   SVA+
Sbjct:   80 EEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAE 144

[Close]

BLAST of GR912300 vs. TAIR peptide
Match: AT4G39540.3 (| Symbols: SK2 | shikimate kinase 2 | chr4:18378561-18380253 FORWARD LENGTH=308)

HSP 1 Score: 79.337 bits (194), Expect = 7.728e-16
Identity = 37/73 (50.68%), Postives = 55/73 (75.34%), Query Frame = 2

Query:  218 EEELILKNRSQQIQPYLNGRCIYVV--------GMMGSGKTTVGKIISQVLSYSFCDCDTLVEEEVGANSVAD 412
            EE+ ILK ++++++PYLNGR +Y++        GMMGSGKTTVGKI+++ L Y+F DCDTL+E+ +   SVA+
Sbjct:   80 EEQQILKKKAEEVKPYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAE 152

The following BLAST results are available for this feature:

BLAST of GR912300 vs. SwissProt
BLAST of GR912300 vs. TrEMBL
BLAST of GR912300 vs. TAIR peptide

BLAST of GR912300 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
AROK_SOLLC	7.321e-22	42.19	Shikimate kinase, chloroplastic OS=Solanum lycoper...	[more]
AROK_ARATH	2.782e-21	53.68	Shikimate kinase, chloroplastic OS=Arabidopsis tha...	[more]
AROK_PROMA	1.751e-7	50.00	Shikimate kinase OS=Prochlorococcus marinus GN=aro...	[more]
AROK_SYNSC	3.900e-7	36.84	Shikimate kinase OS=Synechococcus sp. (strain CC96...	[more]
AROK_SYNP6	5.094e-7	48.84	Shikimate kinase OS=Synechococcus sp. (strain ATCC...	[more]
AROK_SYNE7	5.094e-7	48.84	Shikimate kinase OS=Synechococcus elongatus (strai...	[more]
AROK_SYNPX	6.652e-7	37.50	Shikimate kinase OS=Synechococcus sp. (strain WH81...	[more]
AROK_CYAP8	8.688e-7	57.14	Shikimate kinase OS=Cyanothece sp. (strain PCC 880...	[more]

BLAST of GR912300 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6THS3_SOYBN	2.880e-40	62.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q30CZ9_FAGSY	1.213e-30	67.74	Putative shikimate kinase OS=Fagus sylvatica PE=2 ...	[more]
B9T204_RICCO	5.634e-28	64.77	Shikimate kinase, chloroplast, putative OS=Ricinus...	[more]
B9H5B3_POPTR	9.611e-28	66.67	Shikimate kinase (Fragment) OS=Populus trichocarpa...	[more]
B9HG21_POPTR	3.652e-27	65.63	Shikimate kinase OS=Populus trichocarpa GN=SK3 PE=...	[more]
B9VU88_VITVI	1.812e-26	47.97	Shikimate kinase OS=Vitis vinifera PE=2 SV=1	[more]
A5AZY1_VITVI	1.812e-26	47.97	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6TLJ4_SOYBN	8.995e-26	62.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
D0VBC3_VITVI	7.615e-25	46.62	Shikimate kinase 02 (Fragment) OS=Vitis vinifera P...	[more]
A8MRG1_ARATH	5.647e-20	53.68	Uncharacterized protein At2g21940.3 OS=Arabidopsis...	[more]

BLAST of GR912300 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT2G21940.4	1.899e-22	52.63	\| Symbols: SK1, ATSK1 \| shikimate kinase 1 \| chr2:...	[more]
AT2G21940.5	3.239e-22	53.68	\| Symbols: SK1, ATSK1 \| shikimate kinase 1 \| chr2:...	[more]
AT2G21940.3	3.239e-22	53.68	\| Symbols: SK1, ATSK1 \| shikimate kinase 1 \| chr2:...	[more]
AT2G21940.2	3.239e-22	53.68	\| Symbols: SK1, ATSK1 \| shikimate kinase 1 \| chr2:...	[more]
AT2G21940.1	3.239e-22	53.68	\| Symbols: SK1, ATSK1 \| shikimate kinase 1 \| chr2:...	[more]
AT4G39540.2	2.173e-18	58.46	\| Symbols: SK2, ATSK2 \| shikimate kinase 2 \| chr4:...	[more]
AT4G39540.1	2.173e-18	58.46	\| Symbols: SK2, ATSK2 \| shikimate kinase 2 \| chr4:...	[more]
AT4G39540.3	7.728e-16	50.68	\| Symbols: SK2 \| shikimate kinase 2 \| chr4:1837856...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000623	Shikimate kinase	PRINTS	PR01100	SHIKIMTKNASE	coord: 94..109 score: 6.9e-10coord: 118..131 score: 6.9
IPR000623	Shikimate kinase	PFAM	PF01202	SKI	coord: 100..134 score: 2.2
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 92..132 score: 2.6
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 73..133 score: 1.1
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 91..133 score: 3.5
None	No IPR available	SEG	seg	seg	coord: 1..14 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR912300 ID=GR912300; Name=GR912300; organism=Cicer arietinum; type=EST; length=413bp
CAGTGCTGCTGCTGCAATGGATGCTAAAGCTGTTCAAACGTTGAATCCCT
CGGGTTCAATCCGACCCGAAAAGTTTGGGATAAGACCCGCTTTTTCATTG
AGTCGGCCCGGAAATATTCGGTTTATTCGGCGCAGGATTGCTCCTATGGA
GGTTTCCTGTTCTTATAACAACATTCCAGCTTCGATATTGAAATCTGAAG
GGCGCAATGTTCCCCTTGAGGAAGAGTTGATTCTGAAGAATAGGTCGCAA
CAGATCCAGCCTTATTTAAATGGACGCTGTATATATGTTGTTGGAATGAT
GGGCTCTGGGAAGACAACTGTGGGGAAGATTATATCGCAAGTGCTTAGCT
ATTCATTTTGTGATTGTGATACATTGGTGGAGGAAGAGGTTGGTGCAAAC
TCCGTAGCTGATA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004765	shikimate kinase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000623	Shikimate_kinase/TSH1

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