GR915129

EST Overview
NameGR915129
Unique NameGR915129
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length475
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR915129 vs. TrEMBL
Match: C6TG63_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-18
Identity = 53/97 (54.64%), Postives = 64/97 (65.98%), Query Frame = 1 
Query:  160 MFGVVRRRVAXXXXXXXXXXXXXK-IRSG---TARVSSVVEKEVAFSSGGCGNIRNFCHTTPGRWINSKPIRDIFYQEASIQTQRHSFSSESGDSVD 438
            MFGVVRRRVA             + IRSG   +AR SS+  KE+AF SGGCG +RNF H T G WINSKP+R + + EA++QT    FSSESGD+VD
Sbjct:    1 MFGVVRRRVASGSPSPWLLGQSVQNIRSGPSVSARASSIAVKEIAFPSGGCGFVRNFSHITLGSWINSKPMRVVIHPEATVQTLGRLFSSESGDTVD 97
[Close]
BLAST of GR915129 vs. TrEMBL
Match: B9SVA1_RICCO (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1303600 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.099e-7
Identity = 43/110 (39.09%), Postives = 57/110 (51.82%), Query Frame = 1 
Query:  157 IMFGVVRRRV---AXXXXXXXXXXXXXKIRSGTARVSSVVEKEVAFSSGGCGNIRNFC-HTTPGRWINSKPIRDIFYQEASIQTQRHSFSSESGDSVDAVVPPLAESIED 474
            +M GV+RRRV   A             K  +   RVSS+ EKE+  +  G G+  NF    + G  ++S+ IRD     A+ Q     FSS+SGD VDAVVP + ESI D
Sbjct:    1 MMLGVLRRRVTTGASSSSVLRRSLQTTKPAASAPRVSSLPEKEILLNLRGLGSAGNFSTFISSGCSVSSRSIRDASSMMATKQVWIRPFSSDSGDLVDAVVPFMGESITD 110
The following BLAST results are available for this feature:
BLAST of GR915129 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6TG63_SOYBN1.060e-1854.64Putative uncharacterized protein OS=Glycine max PE... [more]
B9SVA1_RICCO1.099e-739.09Dihydrolipoamide succinyltransferase component of ... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 13..25
score
NoneNo IPR availableSEGsegsegcoord: 48..60
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR915129 ID=GR915129; Name=GR915129; organism=Cicer arietinum; type=EST; length=475bp
GATTAGCGTGGTCGCGGCCGAGGTAGAAAGTGAAAAATTATTATTCTCTC
ATCGTCGGCGATCTCCTCCTCTGCCTTATTCAACCCTACTTTTCGATCTA
CGTTTCCACACTCAGGTTTGAATTTTGAAAGAAGAATAAGAAGAAGAGCG
TAAGTAATCATGTTTGGTGTTGTAAGGCGAAGGGTTGCTTCTGGAGGCAC
ATCTTCGTTGCTTGGTCAGTCAGGGCTGAAAATCCGGTCTGGCACTGCTA
GAGTTTCTTCCGTTGTGGAAAAAGAGGTTGCATTTAGCTCAGGAGGATGT
GGCAATATCCGGAATTTCTGTCACACAACACCTGGACGCTGGATTAATTC
AAAACCTATAAGGGACATTTTTTATCAAGAGGCTTCCATTCAAACACAGA
GGCATTCATTTTCTTCGGAAAGTGGAGATTCTGTTGATGCTGTGGTCCCT
CCATTGGCTGAATCCATCGAAGATG
back to top