GR915486

EST Overview
NameGR915486
Unique NameGR915486
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length167
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR915486 vs. TrEMBL
Match: A2Q4A8_MEDTR (Cytochrome b561 / ferric reductase transmembrane (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC157375g1v1 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.074e-14
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 2 
Query:   26 YWNIYHYLIGYSTXXXXXXNVFKGFEAMGDYVGDRYKDWKHVYIGII 166
            YWNIYH+++GY T      NVFKGFEA+GD+VGDRYK+WKH YIGII
Sbjct:  216 YWNIYHHVVGYVTISISIVNVFKGFEALGDFVGDRYKNWKHAYIGII 262
[Close]
BLAST of GR915486 vs. TrEMBL
Match: A9PFK8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830497 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.144e-7
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 2 
Query:   26 YWNIYHYLIGYSTXXXXXXNVFKGFEAMGDYVGDRYKDWKHVYIGII 166
            YWNIYH+ IGY+T      N+F+GFEA+     DR K+WK  YIG++
Sbjct:  308 YWNIYHHTIGYTTVILSIVNIFEGFEAL-----DREKNWKKAYIGVL 349
The following BLAST results are available for this feature:
BLAST of GR915486 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
A2Q4A8_MEDTR2.074e-1470.21Cytochrome b561 / ferric reductase transmembrane (... [more]
A9PFK8_POPTR7.144e-751.06Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006593Cytochrome b561/ferric reductase transmembranePROFILEPS50939CYTOCHROME_B561coord: 1..55
score: 10
NoneNo IPR availableSEGsegsegcoord: 22..27
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR915486 ID=GR915486; Name=GR915486; organism=Cicer arietinum; type=EST; length=167bp
GATTTCGAGCGGCCGCCCGGGCAGGTACTGGAATATTTACCACTACCTTA
TTGGATACTCTACCATAATCATTAGTATTATTAATGTTTTTAAAGGGTTT
GAGGCTATGGGAGATTATGTTGGAGATCGTTACAAGGACTGGAAACATGT
GTATATTGGAATTATTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM