HO063408
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063408 vs. TrEMBL
Match: C6T7Y7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.714e-14 Identity = 58/153 (37.91%), Postives = 73/153 (47.71%), Query Frame = -3 Query: 215 SPHQSYSCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKI-RKQPKFRMXXXXXXXXXXXXXXXXXXXXXXXXXXXYRNSWP--------EACSRRFDASMELNNLNAVSHDSYHGISNSKIPATENPCHVGETM 646 S HQ+YS S S AP KL+ A+KGSREK GG +KL+VKWA DVYDPVPTL SHTV+ +KQ K R + ++C + + EL+ L+ S DSY G S K TE V E + Sbjct: 105 SAHQTYSRSVSLPAPLKLIPAIKGSREKHGGSQVKLNVKWAADVYDPVPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQKGNSSRGGSSKDKQFRKLGGTSGLCYKSMDSCDKVLGVATELDALDVRSQDSYCGTSFLKKSVTELHYSVAEAL 257
BLAST of HO063408 vs. TrEMBL
Match: A5AEC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037693 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-10 Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = -3 Query: 476 SCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVK 628 S +AS P KLVSAMKGSR+K G PL KL+V WAPDVYDP PT+ SHTV+ Sbjct: 144 SRTASLPTPLKLVSAMKGSRDKEGIPLKKLNVTWAPDVYDPPPTIVSHTVR 194
BLAST of HO063408 vs. TrEMBL
Match: Q5ZF05_PLAMJ (Putative uncharacterized protein (Fragment) OS=Plantago major PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.733e-10 Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = -3 Query: 485 QSPHQSYSCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSH 649 +SP++ S S P KLVS++KGSREK G P KLSV WAPDVYDPVPT SH Sbjct: 136 ESPNRCPSRCNSLPTPSKLVSSLKGSREKQGMPPKKLSVSWAPDVYDPVPTSVSH 190
BLAST of HO063408 vs. TrEMBL
Match: B9SZB5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1202340 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.271e-9 Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = -3 Query: 464 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 595 LVSAMKGSREKLG L KL+V WAPDVYDP+P SHTVK +++ Sbjct: 99 LVSAMKGSREKLGASLRKLTVSWAPDVYDPIPNSLSHTVKSKQK 142
BLAST of HO063408 vs. TrEMBL
Match: B9HBE4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560728 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.397e-8 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -3 Query: 452 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPKFR 595 +VSAMKGSREK GG KL+V WAPDVYDP+P SH+VK +++ R Sbjct: 98 IVSAMKGSREKQGGSPRKLTVSWAPDVYDPIPNSLSHSVKSKQKKSSR 145
BLAST of HO063408 vs. TAIR peptide
Match: AT3G53670.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). | chr3:19891104-19892214 FORWARD LENGTH=203) HSP 1 Score: 55.8398 bits (133), Expect = 2.609e-8 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3 Query: 458 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPK 595 L+ A+KG REK G L KLSV WA DVYDP P++ SHT ++QP+ Sbjct: 102 LIPAIKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQ 147
BLAST of HO063408 vs. TAIR peptide
Match: AT3G53670.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:19891104-19892214 FORWARD LENGTH=203) HSP 1 Score: 55.8398 bits (133), Expect = 2.609e-8 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3 Query: 458 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPK 595 L+ A+KG REK G L KLSV WA DVYDP P++ SHT ++QP+ Sbjct: 102 LIPAIKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQ 147
BLAST of HO063408 vs. TAIR peptide
Match: AT2G37480.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:15738645-15739579 FORWARD LENGTH=194) HSP 1 Score: 54.299 bits (129), Expect = 7.590e-8 Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = -3 Query: 464 KAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 610 + P L+ A+KGSREK G L K SV W DVYDP P+++SHTV K+ Sbjct: 86 QTPIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIASHTVTRSKK 134
BLAST of HO063408 vs. TAIR peptide
Match: AT2G37480.2 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:15738645-15739579 FORWARD LENGTH=193) HSP 1 Score: 53.9138 bits (128), Expect = 9.913e-8 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = -3 Query: 464 PQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 604 P L+ A+KGSREK G L K SV W DVYDP P+++SHTV K+ Sbjct: 87 PIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIASHTVTRSKK 133 The following BLAST results are available for this feature:
BLAST of HO063408 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 5
BLAST of HO063408 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063408 ID=HO063408; Name=HO063408; organism=Cicer arietinum; type=EST; length=705bpback to top |