HO063408

EST Overview
NameHO063408
Unique NameHO063408
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length705
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO063408 vs. TrEMBL
Match: C6T7Y7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.714e-14
Identity = 58/153 (37.91%), Postives = 73/153 (47.71%), Query Frame = -3
Query:  215 SPHQSYSCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKI-RKQPKFRMXXXXXXXXXXXXXXXXXXXXXXXXXXXYRNSWP--------EACSRRFDASMELNNLNAVSHDSYHGISNSKIPATENPCHVGETM 646
            S HQ+YS S S  AP KL+ A+KGSREK GG  +KL+VKWA DVYDPVPTL SHTV+  +KQ K R                             +            ++C +    + EL+ L+  S DSY G S  K   TE    V E +
Sbjct:  105 SAHQTYSRSVSLPAPLKLIPAIKGSREKHGGSQVKLNVKWAADVYDPVPTLLSHTVRSNKKQQKSRKKKPEKKNGKKGQKGNSSRGGSSKDKQFRKLGGTSGLCYKSMDSCDKVLGVATELDALDVRSQDSYCGTSFLKKSVTELHYSVAEAL 257          
BLAST of HO063408 vs. TrEMBL
Match: A5AEC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037693 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-10
Identity = 35/51 (68.63%), Postives = 40/51 (78.43%), Query Frame = -3
Query:  476 SCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVK 628
            S +AS   P KLVSAMKGSR+K G PL KL+V WAPDVYDP PT+ SHTV+
Sbjct:  144 SRTASLPTPLKLVSAMKGSRDKEGIPLKKLNVTWAPDVYDPPPTIVSHTVR 194          
BLAST of HO063408 vs. TrEMBL
Match: Q5ZF05_PLAMJ (Putative uncharacterized protein (Fragment) OS=Plantago major PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.733e-10
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = -3
Query:  485 QSPHQSYSCSASQKAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSH 649
            +SP++  S   S   P KLVS++KGSREK G P  KLSV WAPDVYDPVPT  SH
Sbjct:  136 ESPNRCPSRCNSLPTPSKLVSSLKGSREKQGMPPKKLSVSWAPDVYDPVPTSVSH 190          
BLAST of HO063408 vs. TrEMBL
Match: B9SZB5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1202340 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.271e-9
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = -3
Query:  464 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 595
            LVSAMKGSREKLG  L KL+V WAPDVYDP+P   SHTVK +++
Sbjct:   99 LVSAMKGSREKLGASLRKLTVSWAPDVYDPIPNSLSHTVKSKQK 142          
BLAST of HO063408 vs. TrEMBL
Match: B9HBE4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560728 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.397e-8
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = -3
Query:  452 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPKFR 595
            +VSAMKGSREK GG   KL+V WAPDVYDP+P   SH+VK +++   R
Sbjct:   98 IVSAMKGSREKQGGSPRKLTVSWAPDVYDPIPNSLSHSVKSKQKKSSR 145          
BLAST of HO063408 vs. TAIR peptide
Match: AT3G53670.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). | chr3:19891104-19892214 FORWARD LENGTH=203)

HSP 1 Score: 55.8398 bits (133), Expect = 2.609e-8
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3
Query:  458 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPK 595
            L+ A+KG REK G  L KLSV WA DVYDP P++ SHT   ++QP+
Sbjct:  102 LIPAIKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQ 147          
BLAST of HO063408 vs. TAIR peptide
Match: AT3G53670.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:19891104-19892214 FORWARD LENGTH=203)

HSP 1 Score: 55.8398 bits (133), Expect = 2.609e-8
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3
Query:  458 LVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQPK 595
            L+ A+KG REK G  L KLSV WA DVYDP P++ SHT   ++QP+
Sbjct:  102 LIPAIKGGREKHGKSLEKLSVSWAEDVYDPPPSIVSHTRSKKQQPQ 147          
BLAST of HO063408 vs. TAIR peptide
Match: AT2G37480.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:15738645-15739579 FORWARD LENGTH=194)

HSP 1 Score: 54.299 bits (129), Expect = 7.590e-8
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = -3
Query:  464 KAPQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 610
            + P  L+ A+KGSREK G  L K SV W  DVYDP P+++SHTV   K+
Sbjct:   86 QTPIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIASHTVTRSKK 134          
BLAST of HO063408 vs. TAIR peptide
Match: AT2G37480.2 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:15738645-15739579 FORWARD LENGTH=193)

HSP 1 Score: 53.9138 bits (128), Expect = 9.913e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = -3
Query:  464 PQKLVSAMKGSREKLGGPLMKLSVKWAPDVYDPVPTLSSHTVKIRKQ 604
            P  L+ A+KGSREK G  L K SV W  DVYDP P+++SHTV   K+
Sbjct:   87 PIVLIPAIKGSREKYGLSLRKSSVSWGADVYDPPPSIASHTVTRSKK 133          
The following BLAST results are available for this feature:
BLAST of HO063408 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
C6T7Y7_SOYBN1.714e-1437.91Putative uncharacterized protein OS=Glycine max PE... [more]
A5AEC9_VITVI1.150e-1068.63Putative uncharacterized protein OS=Vitis vinifera... [more]
Q5ZF05_PLAMJ9.733e-1061.82Putative uncharacterized protein (Fragment) OS=Pla... [more]
B9SZB5_RICCO1.271e-970.45Putative uncharacterized protein OS=Ricinus commun... [more]
B9HBE4_POPTR2.397e-860.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of HO063408 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G53670.22.609e-856.52| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT3G53670.12.609e-856.52| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT2G37480.17.590e-853.06| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT2G37480.29.913e-855.32| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 25..42
score
NoneNo IPR availableSEGsegsegcoord: 2..18
score
NoneNo IPR availableSEGsegsegcoord: 1..18
score: NAcoord: 86..113
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063408 ID=HO063408; Name=HO063408; organism=Cicer arietinum; type=EST; length=705bp
ATTTTTTTAAAGATAAAAACTGCAATTAAACCAAATAATACCATCCAGCT
TTCAAGATAGCACTAAATAATGTCTATCAGGAAAACTAAAAACTCTTCAT
CACACACAATCTAACATGCAACTAATTATTTAGGCAGTCTTAATATAGGA
TACAATTACTAACAAAACATTATTATGCAGTCTTGATGTAGGAGATAAAA
TCAAGTATGTTATTCATCGTTTCTCCTACATGACAGGGATTTTCTGTAGC
TGGTATTTTTGAGTTGCTAATTCCATGATATGAATCATGGCTGACAGCGT
TAAGATTATTTAATTCCATTGAAGCATCAAATCTTCTGCTACAAGCTTCT
GGCCAACTATTGCGATATTGCTTTTTATCTTTACTGCTACCCCCTTTAGA
ATATTTCTCCTTTTGAACTTTCTTTCCATATTTCTTTTCGCTCTTCTTCA
TCCTAAATTTCGGCTGTTTCCTGATTTTCACAGTATGTGAGGATAATGTT
GGTACGGGATCATACACATCAGGGGCCCATTTAACAGATAATTTCATAAG
TGGTCCTCCGAGTTTCTCACGGCTACCCTTCATGGCAGATACAAGTTTTT
GAGGTGCTTTCTGAGATGCTGAGCATGAGTAACTTTGATGTGGAGATTGC
TCAGAGAGTGATTCTGTGGATGACGTATCAGCCTCCTCATCAGAAGAGCT
TGATG
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