CK148996

EST Overview


Name	CK148996
Unique Name	CK148996
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	522

Libraries


Library Name	Type
LIBEST_014674 Suppressive subtractive hybridization library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of CK148996 vs. TrEMBL
Match: C3KNW0_RHISN (Putative nucleotidyltransferase protein OS=Rhizobium sp. (strain NGR234) GN=NGR_b03040 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.249e-7
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = -1

Query:  352 YVKGRYSKHFKITDEELAYLVERIGILRGLIDAACQKRLADLRDQAG 492
            YVK RYSKHF+I++E LA+L+ER   L  L++  CQ+RLA+L+  AG
Sbjct:  255 YVKARYSKHFEISEEALAWLLERTEHLHRLVETVCQERLAELKRAAG 301

The following BLAST results are available for this feature:

BLAST of CK148996 vs. TrEMBL

BLAST of CK148996 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
C3KNW0_RHISN	8.249e-7	55.32	Putative nucleotidyltransferase protein OS=Rhizobi...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 31..43 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK148996 ID=CK148996; Name=CK148996; organism=Cicer arietinum; type=EST; length=522bp
TAACGGGTCGCGGACGATGTAGTCCCGGCAAAAAGCCAGCCACCGCCATC
GGTGCCACGCCTGTCCACTCGAACTCGGCATCCCAGTTGGCGAGACCCGG
AATAAGTCGCTGAGGTCGTCGGAAAGCTATCGCGCAAGGTCATTGGTTTC
CATAGGTTCGTTGTGCGTCACCACCGGCTCGCTGACGGCGTGATGGGTTC
ACTCTCACCGGTTGCGACGGACGAGAACATAGGCAGCCCCGTGTCTGGCT
GATCAGCGCGTTGCATGCGCCGCACCGGAGGCGAGGCATTTGTGGTTGAC
CGGACTGCGCTGAACGCTCGCATCCGGTGAGCTGTTTGGTCAGACGGATC
GACCGGCCTGATCACGCAGGTCGGCTAACCGTTTCTGGCACGCCGCATCG
ATCAGGCCTCGCAGGATCCCGATCCGTTCGACAAGATATGCCAGCTCTTC
ATCGGTGATCTTGAAATGCTTCGAATATCGACCCTTCACATAGCGGCGCG
AAGGAGCTCGAAGCTGCGCCGC

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