GR393036

EST Overview
NameGR393036
Unique NameGR393036
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length340
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR393036 vs. SwissProt
Match: PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.377e-11
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAARL P ++  +S     + +E  KV+ EE+C  I E++CL+RR+LV HTDYIYTQ  KP
Sbjct:   19 TYAARLTPTTTTALSRENSVKEIEGDKVE-EESCNGIGEEECLIRRSLVLHTDYIYTQNHKP 79          
BLAST of GR393036 vs. SwissProt
Match: PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.328e-7
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 1
Query:  118 ARLAPVSSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            A+ A    P  ST + H + E V    +E CE + E++CLMRRTL AH DYIYTQ   P
Sbjct:   20 AQAARPLQPADSTKSVHVIPEKVH---DEACEGVGEEECLMRRTLTAHVDYIYTQDHNP 75          
BLAST of GR393036 vs. SwissProt
Match: PSK2_ARATH (Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 6.591e-7
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
Query:  175 LEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQK 291
            L+D+ + ++ENC    ++DCLMRRTLVAHTDYIYTQK+K
Sbjct:   49 LDDMHM-VDENC-GADDEDCLMRRTLVAHTDYIYTQKKK 85          
BLAST of GR393036 vs. TrEMBL
Match: Q7PCB3_SOYBN (Putative phytosulfokine peptide (Fragment) OS=Glycine max GN=PSK2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.929e-18
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYA RL P SS I S  TQH VLE+ K+D+EE C+ I E++CLMRRTLVAHTDYIYTQK KP
Sbjct:    3 TYAGRLGPASSSITSIKTQHGVLEEEKLDVEETCDGIGEEECLMRRTLVAHTDYIYTQKHKP 64          
BLAST of GR393036 vs. TrEMBL
Match: D7U6X7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_1328.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004437001 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.072e-10
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEE-NCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAAR  P S       TQH  +E  + ++ + NCE + ED+CLMRRTL AH DYIYTQK+KP
Sbjct:   20 TYAARPQPASPHDFPGKTQHGGVEAERAEVVDGNCEGVGEDECLMRRTLAAHIDYIYTQKEKP 82          
BLAST of GR393036 vs. TrEMBL
Match: A5BE70_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018587 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.828e-10
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1
Query:  115 AARLAPVSSPIISTNTQHEVLEDVK-VDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            AAR  P  S +     QH  +++ K V++EE+CE + E++CLMRRTL AHTDYIYTQK+ P
Sbjct:   23 AARPGPSFSDVTPMKIQHGDVDEAKTVEVEESCEGVGEEECLMRRTLAAHTDYIYTQKKNP 83          
BLAST of GR393036 vs. TrEMBL
Match: B9HFY9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_563339 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.880e-9
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDI-EENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAAR  P          Q +V++    ++ EE+CE + E++CLMRRTL AHTDYIYTQK KP
Sbjct:   22 TYAARPEPGFPNGSLAKNQQKVVDAEHAEVMEESCEGVGEEECLMRRTLAAHTDYIYTQKHKP 84          
BLAST of GR393036 vs. TrEMBL
Match: Q7PCA6_SOLLC (Putative phytosulfokine peptide OS=Solanum lycopersicum GN=PSK4 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.310e-8
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHE-VLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            +YAAR  P+       N QH+ V+E  +V  EE+C+ + E++CL RRTL AH DYIYTQ Q P
Sbjct:   20 SYAARPNPLFHEATLNNIQHQDVVEPKEVGKEESCKGVKEEECLERRTLAAHLDYIYTQNQNP 82          
BLAST of GR393036 vs. TrEMBL
Match: D7LSY3_ARALY (ATPSK4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906292 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.310e-8
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAARL P ++   S     + +E   V+ EE+C  I E++CL+RR+LV HTDYIYTQ  KP
Sbjct:   19 TYAARLTPTTTTASSRENSVKEIEGDNVE-EESCIGIGEEECLIRRSLVVHTDYIYTQNHKP 79          
BLAST of GR393036 vs. TrEMBL
Match: B9IBM1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571992 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.310e-8
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEE--NCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAAR  P          QH+V+E    ++ E  +CE + E++CLMRRTL AHTDYIYTQK  P
Sbjct:   22 TYAARPEPGFPGGSLAKNQHKVVEAEHAEVMEEISCEGLGEEECLMRRTLAAHTDYIYTQKNNP 85          
BLAST of GR393036 vs. TrEMBL
Match: Q7PCB5_GOSAR (Putative phytosulfokine peptide OS=Gossypium arboreum GN=PSK1 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.234e-8
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 1
Query:  109 TYAARLAPV---SSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            ++AAR  P     SP   T +Q     D     E+ CE + ED+CLMRRTL AH DYIYTQKQKP
Sbjct:   21 SFAARSGPAFPNDSPA-KTQSQGTTTTDEIEQSEDRCEGVGEDECLMRRTLAAHLDYIYTQKQKP 84          
BLAST of GR393036 vs. TrEMBL
Match: Q7PCA0_SOLTU (Putative phytosulfokine peptide OS=Solanum tuberosum GN=PSK2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.918e-8
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHE-VLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            +YAAR  P+       N QH+ V+E  +V  EE+C+ + E++CL RRTL AH DYIYTQ + P
Sbjct:   20 SYAARPQPLFHKATLNNIQHQDVVEPKEVGKEESCKGVKEEECLERRTLAAHLDYIYTQNKNP 82          
BLAST of GR393036 vs. TrEMBL
Match: Q1H8M5_BETVU (Phytosulfokine-alpha peptide OS=Beta vulgaris GN=psk PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.811e-8
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 1
Query:  178 EDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            E++KVD  ++C+ ++E++CLMRRTLVAHTDYIYTQ Q P
Sbjct:   38 ENLKVDDNKSCQGVNEEECLMRRTLVAHTDYIYTQHQNP 76          
BLAST of GR393036 vs. TAIR peptide
Match: AT3G49780.1 (| Symbols: ATPSK4, ATPSK3 (FORMER SYMBOL), PSK4 | phytosulfokine 4 precursor | chr3:18465750-18466254 FORWARD LENGTH=79)

HSP 1 Score: 67.0106 bits (162), Expect = 2.683e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  109 TYAARLAPVSSPIISTNTQHEVLEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQKP 294
            TYAARL P ++  +S     + +E  KV+ EE+C  I E++CL+RR+LV HTDYIYTQ  KP
Sbjct:   19 TYAARLTPTTTTALSRENSVKEIEGDKVE-EESCNGIGEEECLIRRSLVLHTDYIYTQNHKP 79          
BLAST of GR393036 vs. TAIR peptide
Match: AT2G22860.1 (| Symbols: ATPSK2, PSK2 | phytosulfokine 2 precursor | chr2:9737666-9738077 FORWARD LENGTH=87)

HSP 1 Score: 52.7582 bits (125), Expect = 5.237e-8
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
Query:  175 LEDVKVDIEENCEDISEDDCLMRRTLVAHTDYIYTQKQK 291
            L+D+ + ++ENC    ++DCLMRRTLVAHTDYIYTQK+K
Sbjct:   49 LDDMHM-VDENC-GADDEDCLMRRTLVAHTDYIYTQKKK 85          
The following BLAST results are available for this feature:
BLAST of GR393036 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PSK3_ARATH3.377e-1151.61Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 ... [more]
PSK_ASPOF1.328e-747.46Phytosulfokines OS=Asparagus officinalis GN=PSK PE... [more]
PSK2_ARATH6.591e-764.10Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 ... [more]
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BLAST of GR393036 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q7PCB3_SOYBN6.929e-1869.35Putative phytosulfokine peptide (Fragment) OS=Glyc... [more]
D7U6X7_VITVI1.072e-1053.97Whole genome shotgun sequence of line PN40024, sca... [more]
A5BE70_VITVI1.828e-1052.46Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HFY9_POPTR5.880e-950.79Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q7PCA6_SOLLC1.310e-849.21Putative phytosulfokine peptide OS=Solanum lycoper... [more]
D7LSY3_ARALY1.310e-850.00ATPSK4 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL... [more]
B9IBM1_POPTR1.310e-850.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q7PCB5_GOSAR2.234e-850.77Putative phytosulfokine peptide OS=Gossypium arbor... [more]
Q7PCA0_SOLTU2.918e-847.62Putative phytosulfokine peptide OS=Solanum tuberos... [more]
Q1H8M5_BETVU3.811e-864.10Phytosulfokine-alpha peptide OS=Beta vulgaris GN=p... [more]
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BLAST of GR393036 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G49780.12.683e-1251.61| Symbols: ATPSK4, ATPSK3 (FORMER SYMBOL), PSK4 | ... [more]
AT2G22860.15.237e-864.10| Symbols: ATPSK2, PSK2 | phytosulfokine 2 precurs... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009438PhytosulfokinePFAMPF06404PSKcoord: 12..83
score: 8.8
NoneNo IPR availableSEGsegsegcoord: 9..21
score
NoneNo IPR availableSEGsegsegcoord: 36..47
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393036 ID=GR393036; Name=GR393036; organism=Cicer arietinum; type=EST; length=340bp
GATCGGAAAGTAATTGGCAATTATAGAAAGCAAAGAGTTAATTAAATGTT
GTCTAAGGCCAGAACCCCCCTTTGCTTGCTAGTGTTCTTCTTCCTCTTCT
TAACCTTCACATATGCAGCAAGACTTGCTCCTGTATCTTCCCCTATCATT
TCAACCAATACTCAACATGAAGTCTTGGAAGATGTGAAGGTCGACATAGA
GGAGAATTGTGAGGATATTAGTGAAGATGATTGTTTGATGAGAAGAACAC
TTGTAGCTCACACGGATTATATCTATACGCAGAAGCAAAAACCATAGATC
CAAATATGGTTTTCTACACTTTGTTGTTGTAATTTTATTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008083growth factor activity
Vocabulary: Biological Process
TermDefinition
GO:0008283cell population proliferation
Vocabulary: INTERPRO
TermDefinition
IPR009438Phytosulfokine