GR396347
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR396347 vs. SwissProt
Match: LHP1_SOLLC (Chromo domain protein LHP1 OS=Solanum lycopersicum GN=LHP1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.681e-26 Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 88 QSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAI--GISVTALQQGLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 QSDRC GAK+RK+G V+RFK+E ++ DT++A+ G T +Q G +N DD+K I +++ P+ Y AS S M DV VTF+A R+DG V+VDNK+LK NPLLLINFYE+++RY+PT Sbjct: 273 QSDRCTGAKKRKSGCVRRFKRETTSAVKDDTQDALAGGPLATFMQDG--------SHNHVMVADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLINFYEENMRYHPT 398
BLAST of GR396347 vs. SwissProt
Match: LHP1_ARATH (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana GN=LHP1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.628e-21 Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 43 QPNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACES--LDTKNAIGISVTALQQ------------GLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 +PN L+ K + ++ R GAKRRK+GSVKRFK++ S + T + +T L G+ EN +++D I KILKP+ ++AS+S +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN T Sbjct: 292 RPNGLLKVYPK-ELDKNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIEELD-------ITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYNRT 444
BLAST of GR396347 vs. SwissProt
Match: LHP1_ORYSJ (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.378e-20 Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 1 Query: 34 HFQQPNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIGISVTALQQGLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPTS 486 H +++ E+ K Q + GAK+RK+G+V+RF++ + + G V A G +E G G+ +K + +I KI+KP+ ++A+++ +Q V +TF A+RSDG EVMVD+K LK NPLLLI++YEQ LRYNPTS Sbjct: 273 HLVNGSSNSENLVKVPPSQGGQVTGAKKRKSGNVRRFEQNKPT----QGQGECGALVVAEDVGSTE--GETGDK--KKTEGCPNRVHITKIIKPVRFAAAVNNDVQQVSITFKALRSDGQEVMVDDKELKANNPLLLISYYEQCLRYNPTS 415
BLAST of GR396347 vs. TrEMBL
Match: C7TQJ9_9ROSA (Putative LHP1 protein (Fragment) OS=Rosa luciae GN=lhp1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.965e-33 Identity = 86/168 (51.19%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 13 TADNLAIHFQQ--------PNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNA---IGISVTA-LQQGLSENAGYLGNNTHQK--IDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRY 474 ++D L++HFQ+ P L G+ +Q R GAKRRK+GSVKRFK+E E T+NA + A + Q EN Y G N+ +K ID+ K A I KILKP+GYS S+S +QDV VTFMAMRSDGTEV+VDNK+ K +PLLLINFYEQHLRY Sbjct: 157 SSDKLSVHFQEAKAPEVNGPTNGLSKVDCGEPVQGGRSTGAKRRKSGSVKRFKQEAQVSELGATQNAPTRVSTRYAARVDQTGVENLDYAGENSGRKNKIDECKEAVRITKILKPMGYSTSISNNVQDVSVTFMAMRSDGTEVIVDNKFFKVNHPLLLINFYEQHLRY 324
BLAST of GR396347 vs. TrEMBL
Match: A7M6F9_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.078e-31 Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 19 DNLAIHFQQPNAHLESQSKGDSIQSDRC-------RGAKRRKTGSVKRFKKEESACESLDTKNAIG-ISV---TALQQGLSENAGYLGNNTHQ--KIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 D L++ FQ+ A E D + C RGAKRRK+GSVKRFK+E E T NA +SV + + Q +EN Y G N+ + KID+++ A I KI+KPIGYS S+S +QDV VTF AMRSDG+EV+VDNK LK +PLLLI+FYEQHLRYNPT Sbjct: 286 DKLSVPFQEGRAP-EVNGPADGLSKVDCTETVQSNRGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452
BLAST of GR396347 vs. TrEMBL
Match: A7M6G0_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.408e-31 Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 1 Query: 19 DNLAIHFQQP-----NAHLESQSKGD---SIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIG-ISV---TALQQGLSENAGYLGNNTHQ--KIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 D L++ FQ+ N + SK D ++QS+R GAKRRK+GSVKRFK+E E T NA +SV + + Q +EN Y G N+ + KID+++ A I KI+KPIGYS S+S +QDV VTF AMRSDG+EV+VDNK LK +PLLLI+FYEQHLRYNPT Sbjct: 286 DKLSVPFQEGRAPEVNGPTDGLSKIDCTETVQSNR--GAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452
BLAST of GR396347 vs. TrEMBL
Match: A7M6G2_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.402e-31 Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 19 DNLAIHFQQ--------PNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIG-ISVTALQQGL---SENAGYLGNNTHQ--KIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 D +++ FQ+ P L + +QS+R GAKRRK+ SVKRFK+E E T NA +SV +G +EN Y G N+ + KID+++ A I KI+KPIGYS S+S +QDV VTF AMRSDG+EV+VDNK LK +PLLLI+FYEQHLRYNPT Sbjct: 287 DKVSVPFQEARAPEVNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455
BLAST of GR396347 vs. TrEMBL
Match: A7M6G1_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.402e-31 Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 19 DNLAIHFQQ--------PNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIG-ISVTALQQGL---SENAGYLGNNTHQ--KIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 D +++ FQ+ P L + +QS+R GAKRRK+ SVKRFK+E E T NA +SV +G +EN Y G N+ + KID+++ A I KI+KPIGYS S+S +QDV VTF AMRSDG+EV+VDNK LK +PLLLI+FYEQHLRYNPT Sbjct: 287 DKVSVPFQEAKAPEVNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455
BLAST of GR396347 vs. TrEMBL
Match: A7M6G6_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.557e-30 Identity = 87/169 (51.48%), Postives = 112/169 (66.27%), Query Frame = 1 Query: 19 DNLAIHFQQP-----NAHLESQSKGD---SIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIG-ISV---TALQQGLSENAGYLGNNTHQ--KIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 D L++ FQ+ N + SK D ++QS+R GAKRRK+GSVKRFK+E E T NA +SV + + Q +EN Y G N+ + KID+++ A I KI+KPIGYS S+S +QDV VTF AMRSDG+EV+VDNK LK +PLLLI+FYEQHLRYN T Sbjct: 286 DKLSVPFQEGRAPEVNGPTDGLSKIDCTETVQSNR--GAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNHT 452
BLAST of GR396347 vs. TrEMBL
Match: D7UB91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_24.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019328001 PE=4 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.318e-29 Identity = 83/170 (48.82%), Postives = 106/170 (62.35%), Query Frame = 1 Query: 16 ADNLAIHFQQPNA-----HLESQSKGDSI---QSDRCRGAKRRKTGSVKRFKKEESACESLDTKNAIGISVTALQQGLS---ENAGYLGNNT--HQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPTS 486 A+ I FQ+ A + SK + + QS R GA+RRK+GSVKRF K+ + CE D +N + T +Q G E+ + GN++ + K D I +I+KPI YSAS+S QDV VTFMAMRSDG EVMVDNK+LK NPLLLINFYEQHLRY+PT+ Sbjct: 259 ANKFKIQFQEVKALEGDCPMNGHSKVERVEMDQSSRRTGARRRKSGSVKRFTKDLAPCEPNDIQN----TATRIQIGSCGRVESPEFPGNDSGLNNKFDGAINMSAITEIIKPISYSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLLLINFYEQHLRYSPTT 424
BLAST of GR396347 vs. TrEMBL
Match: B9I6F0_POPTR (Chromodomain protein OS=Populus trichocarpa GN=CRD902 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.540e-29 Identity = 76/167 (45.51%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 19 DNLAIHFQQPNAH--------LESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNA-----IGISVTALQQGLSENAGYLGNNTHQKIDDTK-TACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYN 477 + IHFQ+ A L D +Q+ RC GAK+RK+GSVKRFKK+ CE + N+ +G + A Q G+ + GN++H + A I KILKPIG+SAS+ +QDV +TF A+RSDG EV VDNK+LK NP LLINFYEQHL+Y+ Sbjct: 271 NKFTIHFQEEKASEDNGIANGLPKVDYVDLVQNSRCTGAKKRKSGSVKRFKKDSVMCEPVFLPNSSGNFSVGSTGAAAQPGIENPSLTWGNSSHMPMTGNSINAFAITKILKPIGFSASVFDNVQDVLITFRALRSDGQEVTVDNKFLKANNPHLLINFYEQHLKYS 437
BLAST of GR396347 vs. TrEMBL
Match: B9SDA2_RICCO (Heterochromatin protein, putative OS=Ricinus communis GN=RCOM_1515380 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.044e-26 Identity = 82/177 (46.33%), Postives = 110/177 (62.15%), Query Frame = 1 Query: 13 TADN-LAIHFQQPNAH--------LESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNA--------IGISV-----TALQQGLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYN 477 +ADN L I+FQ+ N L D++Q+ R GAKRRK+GSVKRFKKE CE + +++ + +SV TAL G+ EN G+N+ K + + I KI+KPIG+SAS+ +QDV VTF+AMRSDG EV+VDN +LK NPLLLI+FYEQHL+Y+ Sbjct: 289 SADNKLLINFQEDNTPGSDGPRNGLPKVDYADAVQNSRRTGAKRRKSGSVKRFKKESVMCEPVCLQSSPFFLQPSPLNVSVGLGGTTAL--GI-ENGNLAGSNSSYK-PVGENSITITKIIKPIGFSASVMDDIQDVLVTFVAMRSDGKEVIVDNSFLKANNPLLLIDFYEQHLKYS 461
BLAST of GR396347 vs. TrEMBL
Match: B9IPZ2_POPTR (Chromo domain protein OS=Populus trichocarpa GN=CRD901 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.038e-26 Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 19 DNLAIHFQQPNAHLESQSKG--------DSIQSDRCRGAKRRKTGSVKRFKKEESACESLDTKNA---IGISVTALQQGLSENAGYLGNNTHQKI-DDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYN 477 +NLAIHFQ+ LE D +Q+ + GA++RK+GSVKRFKK+ L +A +G + Q G+ + GN++H ++T A I KILKP G+SAS+S +QDV +TF A+RSDG EV VDN++LK NP LLINFYEQHL+Y+ Sbjct: 271 NNLAIHFQEEKT-LEGNGLANGLPKVDYDPVQNSQRTGARKRKSGSVKRFKKDSVKPAFLHNSSANFSVGSTGGVAQLGIENPSLTWGNSSHMPTAENTINALAITKILKPTGFSASVSDNVQDVLITFRALRSDGQEVTVDNRFLKANNPHLLINFYEQHLKYS 434
BLAST of GR396347 vs. TAIR peptide
Match: AT5G17690.1 (| Symbols: TFL2, LHP1 | like heterochromatin protein (LHP1) | chr5:5827504-5829537 REVERSE LENGTH=445) HSP 1 Score: 103.219 bits (256), Expect = 1.628e-22 Identity = 65/161 (40.37%), Postives = 93/161 (57.76%), Query Frame = 1 Query: 43 QPNAHLESQSKGDSIQSDRCRGAKRRKTGSVKRFKKEESACES--LDTKNAIGISVTALQQ------------GLSENAGYLGNNTHQKIDDTKTACNIVKILKPIGYSASLSCYMQDVRVTFMAMRSDGTEVMVDNKYLKTYNPLLLINFYEQHLRYNPT 483 +PN L+ K + ++ R GAKRRK+GSVKRFK++ S + T + +T L G+ EN +++D I KILKP+ ++AS+S +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN T Sbjct: 292 RPNGLLKVYPK-ELDKNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMENCNLSQKTKIEELD-------ITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYNRT 444 The following BLAST results are available for this feature:
BLAST of GR396347 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 3
BLAST of GR396347 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR396347 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR396347 ID=GR396347; Name=GR396347; organism=Cicer arietinum; type=EST; length=765bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|