GR400187

EST Overview


Name	GR400187
Unique Name	GR400187
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	443

Libraries


Library Name	Type
LIBEST_024783 ICC4958 Slow drought stresses root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.881e-28
Identity = 63/79 (79.75%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT+DS LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   82 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGK 160

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.293e-27
Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL T+NG+ KD LKLPT+DS LTQIKDGFA+GKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.995e-27
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.911e-27
Identity = 61/79 (77.22%), Postives = 64/79 (81.01%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT+D+ LTQIKDGF EGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.633e-26
Identity = 57/79 (72.15%), Postives = 63/79 (79.75%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ L Q+KDGFAEGKD V SVM AMGEEQIC +KD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.633e-26
Identity = 57/79 (72.15%), Postives = 63/79 (79.75%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ L Q+KDGFAEGKD V SVM AMGEEQIC +KD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.643e-25
Identity = 57/80 (71.25%), Postives = 63/80 (78.75%), Query Frame = -3

Query:  178 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLKT 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ L Q+K GF EGKD V SVM AMGEEQICA+KD G KT
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKT 160

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.146e-25
Identity = 59/79 (74.68%), Postives = 64/79 (81.01%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL T+NG  KD L+LPT+DS L+QIKDGFAEGKD V SVM AMGEEQI ALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.781e-25
Identity = 57/79 (72.15%), Postives = 62/79 (78.48%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ L  IKDGFAEGKD V SVM AMGEEQIC +KD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159

[Close]

BLAST of GR400187 vs. SwissProt
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.781e-25
Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = -3

Query:  178 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLKT 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ L Q+K GF EGKD V SVM AMGEEQICA+KD G K+
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKS 160

[Close]

BLAST of GR400187 vs. TrEMBL
Match: B7FMA6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.412e-26
Identity = 63/79 (79.75%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT+DS LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: C6ZHS4_SOYBN (Eukaryotic translation initiation factor 5A2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.108e-26
Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT++S LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTDESLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: C6SXH6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.108e-26
Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT++S LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTDESLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: B7FGR9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.108e-26
Identity = 61/79 (77.22%), Postives = 66/79 (83.54%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL T+NG+ KD LKLPT+DS LTQIKDGFA+GKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: A5B605_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018888 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.365e-26
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: A1Z3W7_ROSCH (EIF5A OS=Rosa chinensis PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.365e-26
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD L+LPT+D+ LTQIKDGFAEGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: B7FBH3_9ASPA (eIF-5A protein OS=Phalaenopsis hybrid cultivar GN=eifph1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.007e-26
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+GF SL TENG  KD LKLPT+D+ LTQIKDGFAEGKD V +VM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRTDYQLIDIAEDGFLSLLTENGNTKDDLKLPTDDNLLTQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: C7SCX7_POPDE (eIF5A2 OS=Populus deltoides PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.663e-25
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNR DYQL DI E+GF SL TENG  KD L+LPT+DS LTQIKDGF EGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRVDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDSLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: A9PK40_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.663e-25
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNR DYQL DI E+GF SL TENG  KD L+LPT+DS LTQIKDGF EGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRVDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDSLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TrEMBL
Match: A9PB16_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_717121 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.663e-25
Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNR DYQL DI E+GF SL TENG  KD L+LPT+DS LTQIKDGF EGKD V SVM AMGEEQICALKD G K
Sbjct:   81 CDVPHVNRVDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDSLLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of GR400187 vs. TAIR peptide
Match: AT1G69410.1 (| Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158)

HSP 1 Score: 110.153 bits (274), Expect = 4.856e-25
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNR DYQL DI E+GF SL T+NG+ KD LKLPT+++ LTQ+K+GF EGKD V SVM AMGEEQ+CALK+ G K
Sbjct:   80 CDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of GR400187 vs. TAIR peptide
Match: AT1G13950.1 (| Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A | eukaryotic elongation factor 5A-1 | chr1:4773631-4774668 FORWARD LENGTH=158)

HSP 1 Score: 105.145 bits (261), Expect = 1.562e-23
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = -3

Query:  181 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNGLK 417
            C VPHVNRTDYQL DI E+G+ SL T+NG+ KD LKLP +D+ L QIK GF +GKD V SVM AMGEEQI ALKD G K
Sbjct:   80 CDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of GR400187 vs. TAIR peptide
Match: AT1G26630.1 (| Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein | chr1:9205968-9207098 FORWARD LENGTH=159)

HSP 1 Score: 98.5969 bits (244), Expect = 1.462e-21
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = -3

Query:  187 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQIKDGFAEGKDPVGSVMFAMGEEQICALKDNG 417
            C VPHVNR DYQL DI E+GF SL T++G  KD LKLPT+D    Q++ GF EGKD V SVM +MGEEQICA+K+ G
Sbjct:   80 CDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of GR400187 vs. TAIR peptide
Match: AT1G26630.2 (| Symbols: FBR12, ATELF5A-2, ELF5A-2 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein | chr1:9205968-9207013 FORWARD LENGTH=138)

HSP 1 Score: 62.7734 bits (151), Expect = 8.890e-11
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = -3

Query:  277 C*VPHVNRTDYQLFDIFEEGFGSLPTENGTNKDGLKLPTEDSFLTQI 417
            C VPHVNR DYQL DI E+GF SL T++G  KD LKLPT+D    Q+
Sbjct:   80 CDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQL 126

The following BLAST results are available for this feature:

BLAST of GR400187 vs. SwissProt
BLAST of GR400187 vs. TrEMBL
BLAST of GR400187 vs. TAIR peptide

BLAST of GR400187 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF5A1_MEDSA	7.881e-28	79.75	Eukaryotic translation initiation factor 5A-1 OS=M...	[more]
IF5A2_MEDSA	2.293e-27	77.22	Eukaryotic translation initiation factor 5A-2 OS=M...	[more]
IF5A2_NICPL	2.995e-27	77.22	Eukaryotic translation initiation factor 5A-2 OS=N...	[more]
IF5A_SENVE	3.911e-27	77.22	Eukaryotic translation initiation factor 5A OS=Sen...	[more]
IF5A5_SOLTU	9.633e-26	72.15	Eukaryotic translation initiation factor 5A-5 OS=S...	[more]
IF5A1_SOLLC	9.633e-26	72.15	Eukaryotic translation initiation factor 5A-1 OS=S...	[more]
IF5A4_SOLLC	1.643e-25	71.25	Eukaryotic translation initiation factor 5A-4 OS=S...	[more]
IF5A4_SOLTU	2.146e-25	74.68	Eukaryotic translation initiation factor 5A-4 OS=S...	[more]
IF5A1_TOBAC	4.781e-25	72.15	Eukaryotic translation initiation factor 5A-1 OS=N...	[more]
IF5A1_SOLTU	4.781e-25	70.00	Eukaryotic translation initiation factor 5A-1/2 OS...	[more]

BLAST of GR400187 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FMA6_MEDTR	1.412e-26	79.75	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6ZHS4_SOYBN	4.108e-26	78.48	Eukaryotic translation initiation factor 5A2 OS=Gl...	[more]
C6SXH6_SOYBN	4.108e-26	78.48	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FGR9_MEDTR	4.108e-26	77.22	Putative uncharacterized protein OS=Medicago trunc...	[more]
A5B605_VITVI	5.365e-26	77.22	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A1Z3W7_ROSCH	5.365e-26	77.22	EIF5A OS=Rosa chinensis PE=2 SV=1	[more]
B7FBH3_9ASPA	7.007e-26	77.22	eIF-5A protein OS=Phalaenopsis hybrid cultivar GN=...	[more]
C7SCX7_POPDE	2.663e-25	75.95	eIF5A2 OS=Populus deltoides PE=2 SV=1	[more]
A9PK40_9ROSI	2.663e-25	75.95	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PB16_POPTR	2.663e-25	75.95	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GR400187 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G69410.1	4.856e-25	68.35	\| Symbols: ATELF5A-3, ELF5A-3 \| eukaryotic elongat...	[more]
AT1G13950.1	1.562e-23	68.35	\| Symbols: EIF-5A, ELF5A-1, ATELF5A-1, EIF5A \| euk...	[more]
AT1G26630.1	1.462e-21	63.64	\| Symbols: FBR12, ATELF5A-2, ELF5A-2 \| Eukaryotic ...	[more]
AT1G26630.2	8.890e-11	61.70	\| Symbols: FBR12, ATELF5A-2, ELF5A-2 \| Eukaryotic ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001884	Translation elongation factor IF5A	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A-RELATED	coord: 1..77 score: 6.9
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 4..73 score: 2.1
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 4..75 score: 2.2
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 3..72 score: 1.9
None	No IPR available	PANTHER	PTHR11673:SF2	INITIATION FACTOR 5A	coord: 1..77 score: 6.9
None	No IPR available	SEG	seg	seg	coord: 17..28 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR400187 ID=GR400187; Name=GR400187; organism=Cicer arietinum; type=EST; length=443bp
CAAAAACTACTTCTCCTTGGGAAACCCGCGTTTATAACAAACCCCCAGGA
CCCCGTAGACCATGACGGATAAACCTTCATAAATCCGTTGGCCAGGTCTG
GAACATAACACTGTGAAAGCTTGGAAAAGGAATCTTTGCTTAAAAGGAAA
CAACGAACTGGCAGGCAAAAAAGGGTAGGTCTTAAGACCATTATCCTTTA
GGGCACAAATCTGTTCCTCGCCCATAGCAAACATAACAGACCCAACAGGG
TCTTTTCCCTCAGCAAATCCGTCCTTAATCTGAGTGAGAAAACTGTCCTC
GGTAGGAAGCTTGAGGCCATCCTTATTGGTCCCATTTTCAGTAGGCAGAC
TCCCAAATCCCTCCTCAAAAATATCAAAGAGCTGGTAGTCAGTACGATTC
ACATGGGGAACCTAACAAAAACAAAAAATTGAAAAAACCCTTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003746	translation elongation factor activity
GO:0043022	ribosome binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006452	translational frameshifting
GO:0008612	peptidyl-lysine modification to peptidyl-hypusine
GO:0045901	positive regulation of translational elongation
GO:0045905	positive regulation of translational termination

Vocabulary: **INTERPRO**
Term	Definition
IPR001884	IF5A-like
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like
IPR020189	Transl_elong_IF5A_C

Search form