GR420772

EST Overview


Name	GR420772
Unique Name	GR420772
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	642

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420772 vs. SwissProt
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.468e-13
Identity = 60/141 (42.55%), Postives = 69/141 (48.94%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL    K      KRASKIR   KL   SKE    KYVNTYRR     +     KAPKIQRLVT   L+                     +     A+ LKEQR+R + S+   +  LS+A   T
Sbjct:  111 LNLVI--VKKGENDLPGLTDVEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLSAAAAKT 246

[Close]

BLAST of GR420772 vs. SwissProt
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.916e-13
Identity = 57/140 (40.71%), Postives = 65/140 (46.43%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR    L        YVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQR+R + S+   +  LSSA    +V
Sbjct:  111 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPSV 248

[Close]

BLAST of GR420772 vs. SwissProt
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 6.540e-12
Identity = 55/134 (41.04%), Postives = 63/134 (47.01%), Query Frame = -2

Query:  237 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSA 638
            LNLVI  VKKG +DLPGL  T K      KRASKIR    L       KYVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQR+R + S+   +  LSSA
Sbjct:  111 LNLVI--VKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

[Close]

BLAST of GR420772 vs. SwissProt
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 2.326e-9
Identity = 53/140 (37.86%), Postives = 68/140 (48.57%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERS--REKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL  T K      RE + S+  +  +        KYVNT     +FT    G KAPKIQRLVT   L+                     +     A+ LKEQRE+ + S+   +  LS+A+KP+
Sbjct:   66 LNLVI--VKKGENDLPGLTDTEKPRMRGPREPQRSEALYFKE----DDVRKYVNT---TAEFTTKWKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQREKRSESLAKKRSRLSAASKPS 196

[Close]

BLAST of GR420772 vs. TrEMBL
Match: O81925_CICAR (40S ribosomal protein S6 (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.170e-15
Identity = 70/143 (48.95%), Postives = 76/143 (53.15%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGK--KAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL    K      KRASKIR   KL   SKE    KYVNTYRRN  FT  A  K  KAPKIQRLVT   L+                     +     A+ LKEQRER + S+   +  LSSATKPT
Sbjct:   74 LNLVI--VKKGENDLPGLTDVEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRN--FTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSSATKPT 209

[Close]

BLAST of GR420772 vs. TrEMBL
Match: Q2VCJ5_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.245e-15
Identity = 64/141 (45.39%), Postives = 72/141 (51.06%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR   KL   SKE    KYVNTYRRN          KAPKIQRLVT   L+                           A+ LKEQRER + S+   +  LS+A+KP+
Sbjct:  111 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRNFTTKTGKNASKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS 246

[Close]

BLAST of GR420772 vs. TrEMBL
Match: B9RJN4_RICCO (40S ribosomal protein S6, putative OS=Ricinus communis GN=RCOM_1037060 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.344e-14
Identity = 63/141 (44.68%), Postives = 73/141 (51.77%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKG+NDLPGL  T K      KRASKIR   KL   SKE    KYVNTYRR+          KAPKIQRLVT   L+                     +     A+ LKEQRER + S+   +  LSSA+KP+
Sbjct:  111 LNLVI--VKKGDNDLPGLTDTEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKKRSRLSSASKPS 246

[Close]

BLAST of GR420772 vs. TrEMBL
Match: B9SIL2_RICCO (40S ribosomal protein S6, putative OS=Ricinus communis GN=RCOM_0822430 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.116e-14
Identity = 63/141 (44.68%), Postives = 70/141 (49.65%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR   KL   SKE    KYVNTYRR           KAPKIQRLVT   L+                           A  LKEQRER + S+   +  LS+A+KP+
Sbjct:   59 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAQKKQRIAKAKSEAADYQKLLATRLKEQRERRSESLAKKRSRLSAASKPS 194

[Close]

BLAST of GR420772 vs. TrEMBL
Match: Q3HVK4_SOLTU (Ribosomal protein S6-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.191e-13
Identity = 59/138 (42.75%), Postives = 68/138 (49.28%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR    L       KYVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQRER + S+   +  LS+A+KP+
Sbjct:  111 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLGKDDDVRKYVNTYRRTFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS 246

[Close]

BLAST of GR420772 vs. TrEMBL
Match: A9P9Y9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_716478 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.191e-13
Identity = 67/145 (46.21%), Postives = 76/145 (52.41%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGK--KAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR   KL   SKE    KYVNTYRR+  FT  A  K  KAPKIQRLVT   L+                     +     A  LKEQR+R + S+   +  LS A+KP+ V
Sbjct:  111 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRS--FTTKAGKKVSKAPKIQRLVTPLTLQRKRARISDKKKRIAKAKSEAAEYQKLLATRLKEQRDRRSESLAKKRSRLSIASKPSIV 248

[Close]

BLAST of GR420772 vs. TrEMBL
Match: C6T4P7_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.652e-13
Identity = 66/143 (46.15%), Postives = 75/143 (52.45%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGK--KAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGE+DLPGL    K      KRASKIR   KL   SKE    KYVNTYRR   FT  A  K  KAPKIQRLVT   L+                     +     A+ LKEQR+R + S+   + +LSSA KPT
Sbjct:  111 LNLVI--VKKGESDLPGLTDVEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRT--FTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLSSAAKPT 246

[Close]

BLAST of GR420772 vs. TrEMBL
Match: B9HFD9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_718718 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.652e-13
Identity = 63/143 (44.06%), Postives = 70/143 (48.95%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL    K      KRASKIR   KL   SKE    KYVNTYRR           KAPKIQRLVT   L+                     +     A  LKEQRER + S+   +  LS A+KP+ V
Sbjct:  111 LNLVI--VKKGENDLPGLTDVEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISDKKKRITKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLSVASKPSVV 248

[Close]

BLAST of GR420772 vs. TrEMBL
Match: A9PE99_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831359 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.652e-13
Identity = 63/143 (44.06%), Postives = 70/143 (48.95%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL    K      KRASKIR   KL   SKE    KYVNTYRR           KAPKIQRLVT   L+                     +     A  LKEQRER + S+   +  LS A+KP+ V
Sbjct:  111 LNLVI--VKKGENDLPGLTDVEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARISDKKKRISKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLSVASKPSVV 248

[Close]

BLAST of GR420772 vs. TrEMBL
Match: D7TUA2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_17.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015776001 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.464e-13
Identity = 62/141 (43.97%), Postives = 71/141 (50.35%), Query Frame = -2

Query:  225 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEG---KYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPT 638
            LNLVI  VKKGE+DLPGL  T K      KRASKIR   KL   SKE    KYVNTYRR           KAPKIQRLVT   L+                     +     A  LKEQRER + S+   +  LS+A+KP+
Sbjct:  111 LNLVI--VKKGESDLPGLTDTEKPRMRGPKRASKIR---KLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKIQRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSRLSAASKPS 246

[Close]

BLAST of GR420772 vs. TAIR peptide
Match: AT4G31700.2 (| Symbols: RPS6, RPS6A | ribosomal protein S6 | chr4:15346306-15347075 REVERSE LENGTH=188)

HSP 1 Score: 74.3294 bits (181), Expect = 6.072e-14
Identity = 57/140 (40.71%), Postives = 65/140 (46.43%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR    L        YVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQR+R + S+   +  LSSA    +V
Sbjct:   49 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPSV 186

[Close]

BLAST of GR420772 vs. TAIR peptide
Match: AT4G31700.1 (| Symbols: RPS6, RPS6A | ribosomal protein S6 | chr4:15346306-15347714 REVERSE LENGTH=250)

HSP 1 Score: 74.3294 bits (181), Expect = 6.072e-14
Identity = 57/140 (40.71%), Postives = 65/140 (46.43%), Query Frame = -2

Query:  219 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSATKPTTV 638
            LNLVI  VKKGENDLPGL  T K      KRASKIR    L        YVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQR+R + S+   +  LSSA    +V
Sbjct:  111 LNLVI--VKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPSV 248

[Close]

BLAST of GR420772 vs. TAIR peptide
Match: AT5G10360.1 (| Symbols: EMB3010, RPS6B | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=249)

HSP 1 Score: 70.8626 bits (172), Expect = 6.714e-13
Identity = 55/134 (41.04%), Postives = 63/134 (47.01%), Query Frame = -2

Query:  237 LNLVIGFVKKGENDLPGLDVTTKDERSREKRASKIRFNLKLMM*SKEGKYVNTYRRNHQFTRLALGKKAPKIQRLVTHTPLKNCXXXXXXXXXXXXXXXXXXXKLLASRAAELKEQRERSASSV*MAKKELSSA 638
            LNLVI  VKKG +DLPGL  T K      KRASKIR    L       KYVNTYRR     +     KAPKIQRLVT   L+                           A+ LKEQR+R + S+   +  LSSA
Sbjct:  111 LNLVI--VKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 242

The following BLAST results are available for this feature:

BLAST of GR420772 vs. SwissProt
BLAST of GR420772 vs. TrEMBL
BLAST of GR420772 vs. TAIR peptide

BLAST of GR420772 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
RS6_ASPOF	3.468e-13	42.55	40S ribosomal protein S6 OS=Asparagus officinalis ...	[more]
RS61_ARATH	5.916e-13	40.71	40S ribosomal protein S6-1 OS=Arabidopsis thaliana...	[more]
RS62_ARATH	6.540e-12	41.04	40S ribosomal protein S6-2 OS=Arabidopsis thaliana...	[more]
RS6_TOBAC	2.326e-9	37.86	40S ribosomal protein S6 (Fragment) OS=Nicotiana t...	[more]

BLAST of GR420772 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
O81925_CICAR	2.170e-15	48.95	40S ribosomal protein S6 (Fragment) OS=Cicer ariet...	[more]
Q2VCJ5_SOLTU	8.245e-15	45.39	Putative uncharacterized protein OS=Solanum tubero...	[more]
B9RJN4_RICCO	5.344e-14	44.68	40S ribosomal protein S6, putative OS=Ricinus comm...	[more]
B9SIL2_RICCO	9.116e-14	44.68	40S ribosomal protein S6, putative OS=Ricinus comm...	[more]
Q3HVK4_SOLTU	1.191e-13	42.75	Ribosomal protein S6-like protein OS=Solanum tuber...	[more]
A9P9Y9_POPTR	1.191e-13	46.21	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6T4P7_SOYBN	2.652e-13	46.15	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
B9HFD9_POPTR	2.652e-13	44.06	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PE99_POPTR	2.652e-13	44.06	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TUA2_VITVI	3.464e-13	43.97	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GR420772 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G31700.2	6.072e-14	40.71	\| Symbols: RPS6, RPS6A \| ribosomal protein S6 \| ch...	[more]
AT4G31700.1	6.072e-14	40.71	\| Symbols: RPS6, RPS6A \| ribosomal protein S6 \| ch...	[more]
AT5G10360.1	6.714e-13	41.04	\| Symbols: EMB3010, RPS6B \| Ribosomal protein S6e ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 20..31 score
None	No IPR available	SEG	seg	seg	coord: 53..74 score
None	No IPR available	SEG	seg	seg	coord: 41..60 score
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 5..76 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420772 ID=GR420772; Name=GR420772; organism=Cicer arietinum; type=EST; length=642bp
CAACAGAAGTTGCAGTATAAATTTCTATCAAATAGAAACCCTTCAATTCG
ATTGAAATCACTAGGCAAATCAAACATAAATAACTACATTAAAAAATTTA
AAATGCAAAATCAAATGTCATAAATGTTTATCATCAAGACTACCACCTCA
GGGAAACTATGGCAAAGTTTTAAACTGAACAAAACGGCTGTAAAATGCTT
ATTCACCATGTCTCTTGGCACCGTGGTTGGCTTTGTAGCACTGGAAAGCT
CCTTCTTTGCCATCTAAACCGAGCTAGCGCTTCGTTCCCTCTGCTCCTTC
AACTCTGCTGCTCTGGATGCAAGGAGTTTTTGATATTTTCTCTGAGCCTT
GGCAATTCTCTTCTTCTTATCTGCTCGCTTCCTTTGGCAATTCTTCAAAG
GAGTGTGAGTGACCAATCGCTGTATCTTTGGAGCTTTTTTTCCCAGCGCT
AACCTTGTAAATTGGTGATTACGGCGGTAGGTGTTAACATATTTCCCCTC
CTTTGATCACATCATCAGCTTAAGGTTGAATCGGATTTTGGATGCTCTCT
TTTCTCTGGACCTCTCATCCTTGGTAGTAACATCAAGACCTGGTAAATCA
TTTTCACCTTTCTTCACAAAACCAATTACCAAGTTGAGAGAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001377	Ribosomal_eS6

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