GR420840

EST Overview


Name	GR420840
Unique Name	GR420840
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	571

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE1_ARATH (Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.370e-33
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDPDADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMW+E KVN+ELKTYMT++FK   ++   + CD RMGAF+L VNRVA+AT+LR
Sbjct:  303 KAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWEEEKVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE3_SOLLC (Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.005e-33
Identity = 75/109 (68.81%), Postives = 83/109 (76.15%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAK+I+   NHPTDP+ADEIL KKGV ILPDIYANSGGVTVS     FEWV    GFMWDE KVN+ELKTYMT+ FK    +   + CD RMGAF+L VNRVARATVLR
Sbjct:  304 KAKYIIEAANHPTDPEADEILSKKGVTILPDIYANSGGVTVSY----FEWVQNIQGFMWDEKKVNDELKTYMTRGFKDVKDMCKTHNCDLRMGAFTLGVNRVARATVLR 408

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE3_ARATH (Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.005e-33
Identity = 73/109 (66.97%), Postives = 84/109 (77.06%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEILKKKGV+ILPDIYANSGGVTVS     FEWV    GFMWDE KVN ELKTYMT+ FK   ++   + CD RMGAF+L +NRVA+AT +R
Sbjct:  303 KAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSY----FEWVQNIQGFMWDEEKVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHEB_NICPL (Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.698e-31
Identity = 74/109 (67.89%), Postives = 80/109 (73.39%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDP+ADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMWDE +VN ELK YM + FK    +   + CD RMGAF+L VNRVARAT LR
Sbjct:  303 KAKFIVEAANHPTDPEADEILAKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWDEERVNTELKAYMNRGFKDVKDMCKTHNCDLRMGAFTLGVNRVARATTLR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHEA_NICPL (Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.941e-31
Identity = 72/109 (66.06%), Postives = 80/109 (73.39%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKG+VILPDIYAN+GGVTVS     FEWV    GFMWDE KVN EL+ YMTKAF     +   + C  RMGAF+L VNRVARAT LR
Sbjct:  303 KAKFIIEAANHPTDPEADEILCKKGIVILPDIYANAGGVTVSY----FEWVQNIQGFMWDEEKVNRELRKYMTKAFHNLKNMCQSHNCSLRMGAFTLGVNRVARATTLR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE3_MAIZE (Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.453e-31
Identity = 72/109 (66.06%), Postives = 83/109 (76.15%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAK+I+   NHPTDP+ADEIL KKGV+ILPDI ANSGGVTVS     FEWV    GFMWDE KVN EL+TY+T+AF    ++   + CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKYIIEAANHPTDPEADEILSKKGVLILPDILANSGGVTVSY----FEWVQNIQGFMWDEEKVNAELRTYITRAFGNVKQMCRSHSCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE3_VITVI (Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.203e-30
Identity = 72/109 (66.06%), Postives = 80/109 (73.39%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKG VILPDIYAN+GGVTVS     FEWV    GFMW+E KVNNEL+ YMTKAF     +   + C  RMGAF+LAVNRVA AT LR
Sbjct:  303 KAKFIIEAANHPTDPEADEILSKKGGVILPDIYANAGGVTVSY----FEWVQNIQGFMWEEEKVNNELQKYMTKAFHNIKAMCQSHNCSLRMGAFTLAVNRVACATTLR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE2_ARATH (Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.203e-30
Identity = 72/109 (66.06%), Postives = 81/109 (74.31%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDPDADEIL KKGV+ILPDIYAN+GGVTVS     FEWV    GFMW+E KVN EL+ YMT+AF     +   + C+ RMGAF+L VNRVARAT LR
Sbjct:  303 KAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVS----YFEWVQNIQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLR 407

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE3_THEMA (Glutamate dehydrogenase OS=Thermotoga maritima GN=gdhA PE=1 SV=4)

HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16
Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAK +V   N PT P+ADEIL ++G++++PDI AN+GGVTVS     FEWV     F WD  +V N L+  M  AF    K+K     D R  A+ LA++RVA AT  R
Sbjct:  308 KAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVS----YFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNVDMRTAAYILAIDRVAYATKKR 412

[Close]

BLAST of GR420840 vs. SwissProt
Match: DHE2_CLODI (NAD-specific glutamate dehydrogenase OS=Clostridium difficile GN=gluD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.035e-12
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = -2

Query:  232 KAKFI---VNHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAK +    N PT P+ADE+  ++G+V+ PDI  N+GGVTVS     FEWV    G+ W E +V  + +  M KAF+   K+K       R  A+  ++ +VA A  LR
Sbjct:  314 KAKLVCEAANGPTTPEADEVFAERGIVLTPDILTNAGGVTVS----YFEWVQNLYGYYWSEEEVEQKEEIAMVKAFESIWKIKEEYNVTMREAAYMHSIKKVAEAMKLR 418

[Close]

BLAST of GR420840 vs. TrEMBL
Match: Q5F2M9_SOYBN (Glutamate dehydrogenase 1 OS=Glycine max GN=gdh1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.042e-35
Identity = 82/109 (75.23%), Postives = 88/109 (80.73%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDP+ADEILKKKGVVILPDI+ANSGGVTVS     FEWV    GFMWDE KVNNELKTYMTK FK   ++   +ECD RMGAF+LAVNRVARATVLR
Sbjct:  303 KAKFIVEAANHPTDPEADEILKKKGVVILPDIFANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELKTYMTKGFKDVKEMCKTHECDLRMGAFTLAVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: C6TDZ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.049e-34
Identity = 82/109 (75.23%), Postives = 88/109 (80.73%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDP+ADEILKKKGVVILPDI+ANSGGVTVS     FEWV    GFMWDE KVNNELKTYMTK FK   ++   +ECD RMGAF+LAVNRVARATVLR
Sbjct:  303 KAKFIVEAANHPTDPEADEILKKKGVVILPDIFANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELKTYMTKGFKDVKEMCKTHECDPRMGAFTLAVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: Q5QDM6_LUPLU (Glutamate dehydrogenase 1 OS=Lupinus luteus GN=GDH1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.785e-34
Identity = 80/109 (73.39%), Postives = 87/109 (79.82%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDP+ADEILKKKGVVILPDI+ANSGGVTVS     FEWV    GFMWDE KVNNELK YMTK FK   ++   ++CD RMGAF+LAVNRVARATVLR
Sbjct:  303 KAKFIVEAANHPTDPEADEILKKKGVVILPDIFANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELKRYMTKGFKDVKEMCKTHDCDLRMGAFTLAVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: B9SHF8_RICCO (Glutamate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1121650 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.328e-33
Identity = 79/109 (72.48%), Postives = 85/109 (77.98%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMWDE KVNNELKTYMTK FK   ++   + CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELKTYMTKGFKDVKEMCKTHNCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: D7TI66_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033402001 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.591e-33
Identity = 77/109 (70.64%), Postives = 85/109 (77.98%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMWDE KVNNEL+TYMT+ FK   ++   + CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELRTYMTRGFKDVKEMCRTHNCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: Q1HDV6_VITVI (GDHB glutamate dehydrogenase OS=Vitis vinifera GN=gdhB PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.608e-33
Identity = 76/109 (69.72%), Postives = 85/109 (77.98%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKGV+ILPDIYANSGGVTVS     FEWV    GFMWDE KVNNEL+TYMT+ FK   ++   + CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKFIIEAANHPTDPEADEILSKKGVIILPDIYANSGGVTVSY----FEWVQNIQGFMWDEEKVNNELRTYMTRGFKDVKEMCRTHNCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: B9I5Y2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571209 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.124e-32
Identity = 77/109 (70.64%), Postives = 85/109 (77.98%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMWDE KVN+ELK YMTK FK   ++   ++CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKFIIEAANHPTDPEADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWDEKKVNSELKNYMTKGFKDVKEMCKTHDCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: Q1H5A3_ARATH (At5g18170 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.271e-32
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDPDADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMW+E KVN+ELKTYMT++FK   ++   + CD RMGAF+L VNRVA+AT+LR
Sbjct:  303 KAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWEEEKVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: A7YVW3_ACTCH (GDH1 OS=Actinidia chinensis GN=GDH1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.271e-32
Identity = 77/109 (70.64%), Postives = 84/109 (77.06%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEIL KKGVVILPDI+ANSGGVTVS     FEWV    GFMWDE KVN+ELKTYMTK FK    +   + CD RMGAF+L VNRVARATVLR
Sbjct:  303 KAKFIIEAANHPTDPEADEILAKKGVVILPDIFANSGGVTVSY----FEWVQNIQGFMWDEEKVNHELKTYMTKGFKDVKAMCKTHNCDLRMGAFTLGVNRVARATVLR 407

[Close]

BLAST of GR420840 vs. TrEMBL
Match: D7LXS2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488683 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.272e-32
Identity = 75/109 (68.81%), Postives = 85/109 (77.98%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDPDADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMW+E KVN ELKTYMT++FK   ++   + CD RMGAF+L VNRVA+AT+LR
Sbjct:  303 KAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWEEEKVNEELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILR 407

[Close]

BLAST of GR420840 vs. TAIR peptide
Match: AT5G18170.1 (| Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6006172-6008248 FORWARD LENGTH=411)

HSP 1 Score: 141.739 bits (356), Expect = 2.523e-34
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDPDADEIL KKGVVILPDIYANSGGVTVS     FEWV    GFMW+E KVN+ELKTYMT++FK   ++   + CD RMGAF+L VNRVA+AT+LR
Sbjct:  303 KAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSY----FEWVQNIQGFMWEEEKVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILR 407

[Close]

BLAST of GR420840 vs. TAIR peptide
Match: AT3G03910.1 (| Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1006913-1008846 FORWARD LENGTH=411)

HSP 1 Score: 139.813 bits (351), Expect = 9.586e-34
Identity = 73/109 (66.97%), Postives = 84/109 (77.06%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFI+   NHPTDP+ADEILKKKGV+ILPDIYANSGGVTVS     FEWV    GFMWDE KVN ELKTYMT+ FK   ++   + CD RMGAF+L +NRVA+AT +R
Sbjct:  303 KAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSY----FEWVQNIQGFMWDEEKVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIR 407

[Close]

BLAST of GR420840 vs. TAIR peptide
Match: AT5G07440.2 (| Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2356153-2358012 FORWARD LENGTH=411)

HSP 1 Score: 131.339 bits (329), Expect = 3.409e-31
Identity = 72/109 (66.06%), Postives = 81/109 (74.31%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDPDADEIL KKGV+ILPDIYAN+GGVTVS     FEWV    GFMW+E KVN EL+ YMT+AF     +   + C+ RMGAF+L VNRVARAT LR
Sbjct:  303 KAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVS----YFEWVQNIQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLR 407

[Close]

BLAST of GR420840 vs. TAIR peptide
Match: AT5G07440.1 (| Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2356153-2358012 FORWARD LENGTH=411)

HSP 1 Score: 131.339 bits (329), Expect = 3.409e-31
Identity = 72/109 (66.06%), Postives = 81/109 (74.31%), Query Frame = -2

Query:  232 KAKFIV---NHPTDPDADEILKKKGVVILPDIYANSGGVTVSSEHPNFEWV----GFMWDEGKVNNELKTYMTKAFKRCAKLKM*NECDFRMGAFSLAVNRVARATVLR 537
            KAKFIV   NHPTDPDADEIL KKGV+ILPDIYAN+GGVTVS     FEWV    GFMW+E KVN EL+ YMT+AF     +   + C+ RMGAF+L VNRVARAT LR
Sbjct:  303 KAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVS----YFEWVQNIQGFMWEEEKVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLR 407

The following BLAST results are available for this feature:

BLAST of GR420840 vs. SwissProt
BLAST of GR420840 vs. TrEMBL
BLAST of GR420840 vs. TAIR peptide

BLAST of GR420840 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DHE1_ARATH	2.370e-33	68.81	Glutamate dehydrogenase 1 OS=Arabidopsis thaliana ...	[more]
DHE3_SOLLC	9.005e-33	68.81	Glutamate dehydrogenase OS=Solanum lycopersicum GN...	[more]
DHE3_ARATH	9.005e-33	66.97	Probable glutamate dehydrogenase 3 OS=Arabidopsis ...	[more]
DHEB_NICPL	1.698e-31	67.89	Glutamate dehydrogenase B OS=Nicotiana plumbaginif...	[more]
DHEA_NICPL	4.941e-31	66.06	Glutamate dehydrogenase A OS=Nicotiana plumbaginif...	[more]
DHE3_MAIZE	6.453e-31	66.06	Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 S...	[more]
DHE3_VITVI	3.203e-30	66.06	Glutamate dehydrogenase OS=Vitis vinifera GN=GDH P...	[more]
DHE2_ARATH	3.203e-30	66.06	Glutamate dehydrogenase 2 OS=Arabidopsis thaliana ...	[more]
DHE3_THEMA	2.015e-16	46.79	Glutamate dehydrogenase OS=Thermotoga maritima GN=...	[more]
DHE2_CLODI	1.035e-12	39.45	NAD-specific glutamate dehydrogenase OS=Clostridiu...	[more]

BLAST of GR420840 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q5F2M9_SOYBN	7.042e-35	75.23	Glutamate dehydrogenase 1 OS=Glycine max GN=gdh1 P...	[more]
C6TDZ0_SOYBN	2.049e-34	75.23	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q5QDM6_LUPLU	7.785e-34	73.39	Glutamate dehydrogenase 1 OS=Lupinus luteus GN=GDH...	[more]
B9SHF8_RICCO	1.328e-33	72.48	Glutamate dehydrogenase, putative OS=Ricinus commu...	[more]
D7TI66_VITVI	6.591e-33	70.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q1HDV6_VITVI	8.608e-33	69.72	GDHB glutamate dehydrogenase OS=Vitis vinifera GN=...	[more]
B9I5Y2_POPTR	1.124e-32	70.64	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q1H5A3_ARATH	3.271e-32	68.81	At5g18170 OS=Arabidopsis thaliana PE=2 SV=1	[more]
A7YVW3_ACTCH	3.271e-32	70.64	GDH1 OS=Actinidia chinensis GN=GDH1 PE=2 SV=1	[more]
D7LXS2_ARALY	4.272e-32	68.81	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GR420840 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G18170.1	2.523e-34	68.81	\| Symbols: GDH1 \| glutamate dehydrogenase 1 \| chr5...	[more]
AT3G03910.1	9.586e-34	66.97	\| Symbols: GDH3 \| glutamate dehydrogenase 3 \| chr3...	[more]
AT5G07440.2	3.409e-31	66.06	\| Symbols: GDH2 \| glutamate dehydrogenase 2 \| chr5...	[more]
AT5G07440.1	3.409e-31	66.06	\| Symbols: GDH2 \| glutamate dehydrogenase 2 \| chr5...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 17..33 score
None	No IPR available	PANTHER	PTHR11606	GLUTAMATE DEHYDROGENASE	coord: 1..87 score: 2
None	No IPR available	SEG	seg	seg	coord: 1..11 score
None	No IPR available	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 1..86 score: 1.4
IPR006095	Glutamate/phenylalanine/leucine/valine dehydrogenase	PANTHER	PTHR11606:SF2	GLUTAMATE DEHYDROGENASE	coord: 1..87 score: 2
IPR006096	Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal	PFAM	PF00208	ELFV_dehydrog	coord: 1..85 score: 2.1
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720	no description	coord: 1..85 score: 5.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420840 ID=GR420840; Name=GR420840; organism=Cicer arietinum; type=EST; length=571bp
ATAATGGAATATTAAAAGTATTAATCTAAAAAAAGTACATAAAATGCTCT
TCTTCAATTTGTGATAAATCAAATACGAAATGGATCCAAGGGGTGAAAAC
ATTAAACCTTAGTTCACCCAAGCTAAACACATGAAAGCAGCAAAAACTTA
ATAAGTTAACTGATTTGACAGCAAGAACTAAAGCTATCTTTTATTCAAAG
CAGCAGCTACCTTCCCAACAAGATCTCAAGCCCTAAGGACAGTAGCCCTT
GCCACACGGTTAACTGCCAAGCTGAAAGCTCCCATTCGAAAATCACATTC
ATTTCACATCTTGAGTTTTGCACATCTCTTGAAAGCCTTGGTCATGTATG
TCTTTAGCTCATTGTTCACCTTCCCCTCATCCCACATGAACCCAACCCAC
TCAAAGTTTGGATGTTCTGAGCTAACTGTAACACCTCCTGAATTTGCATA
TATGTCTGGGAGGATGACAACACCTTTTTTCTTTAAAATCTCGTCAGCAT
CTGGGTCAGTTGGGTGATTAACTATAAATTTTGCCTTTGCTGCTTCGATT
TCATTTGCATTTTCCCTATTG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0006520	amino acid metabolic process
GO:0055114	obsolete oxidation-reduction process
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0003824	catalytic activity
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR006095	Glu/Leu/Phe/Val/Trp_DH
IPR006096	Glu/Leu/Phe/Val/Trp_DH_C
IPR016040	NAD(P)-bd_dom

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