GT619303
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT619303 vs. TrEMBL
Match: B9SCL2_RICCO (Bromodomain-containing protein, putative OS=Ricinus communis GN=RCOM_0475180 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.505e-12 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGPR-CQFGEKVSQLDANRSCNSIK-KSSPLYSK--KREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 M+A +A KLKIKFS+++I+ VSG + C F V + +R+C+ K +P KR PS +EG +NK++K+DR CA+++K L H GWVFK P Sbjct: 1 MVAVPVVAE--KLKIKFSSRKIDTVSGRKACDFAHNVEKNYHSRACDRENMKQNPRERSAIKRGPSEMVEGQQNKKRKMDRSVIHQCASLVKSLMDHPCGWVFKEP 104
BLAST of GT619303 vs. TrEMBL
Match: B9SXX6_RICCO (Bromodomain-containing protein, putative OS=Ricinus communis GN=RCOM_1207090 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.414e-10 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGPR-CQFGEKVSQLDANRSCNSIK-KSSPLYSK--KREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 +IA +A KLKIKFS+++I+ VSG + C F V + +R+C++ K +P KR P+ +EG K++K+DR CA+++K L H GWVFK P Sbjct: 2 IIAVPVVAE--KLKIKFSSRKIDGVSGRKACGFAHNVEKNYRSRACDTENMKQNPRERSAIKRRPTEMVEGQSKKKRKMDRSVIHQCASLVKSLMDHPCGWVFKEP 105
BLAST of GT619303 vs. TrEMBL
Match: B9S1A3_RICCO (Bromodomain-containing protein, putative OS=Ricinus communis GN=RCOM_0636080 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.947e-9 Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGPR-CQFGEKVSQLDANRSC---NSIKKSSPLYSKKREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 MI+TE + KLKIKFS+ +I+ +S C V + ++ C N +K + + KR PS +EG + K++K+DR C +++K L +H GWVFK P Sbjct: 1 MISTEPVV-AKKLKIKFSSHKIDTISVKNACDMARNVEKNYHSQVCDIENMKQKLTECSAIKRGPSDMVEGQQQKKRKMDRGVIHQCTSLVKSLMNHPCGWVFKEP 105
BLAST of GT619303 vs. TrEMBL
Match: A5C0I5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007433 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.730e-8 Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGP-RCQFGEKVSQLDANRSCNSIKKSSPLYSKKREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 M A I P KLKIKF+ K++E C+FG +S D S +KKR G + K KRQK+DR + C +ILK L +H GWVF P Sbjct: 1 MDAIGKILPNRKLKIKFAAKKVEAEPVTLSCEFGNDISLTD----------ESVHGTKKRGXPGITDVPKAKRQKMDRSTTLQCTSILKXLMTHPAGWVFNQP 93
BLAST of GT619303 vs. TrEMBL
Match: B9GJ33_POPTR (Global transcription factor group OS=Populus trichocarpa GN=GTE901 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.575e-8 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGPRCQFGEK---VSQLDANRSCNSIKKSSPLYSKKREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 MIA+ + KL IK +++RI+ + G + E+ S + + S + +KS S+KR P IE + KRQK+DR +Q C+++LK L +H GWVF P Sbjct: 1 MIASGNVT-MKKLTIKIASQRIQAIPGKKLLGAEQSCSASMGENHGSQMTKQKSVAPVSRKRGPPEMIECQQQKRQKMDRSVTQQCSSLLKSLMAHPAGWVFNKP 104
BLAST of GT619303 vs. TrEMBL
Match: B9I128_POPTR (Global transcription factor group OS=Populus trichocarpa GN=GTE902 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.913e-7 Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 1 Query: 193 MIATETIAPTTKLKIKFSTKRIEVVSGPRCQFGEKVSQLDANRSCNSI--------KKSSPLYSKKREPSGNIEGTKNKRQKIDRKGSQMCANILKCLTSHDYGWVFKVP 498 MIA ++ KL IK +++RIEV+ G + E+ + + + S +KSS S+KR P IE + KR K+DR +Q C+ +LK L H GWVF P Sbjct: 1 MIAAGSVV-MKKLTIKIASQRIEVIPGKKLLAAERSCSVSVSENPGSQTSKSEIVKQKSSVSGSRKRGPPKMIECKQQKRLKMDRAVTQQCSALLKSLMVHPAGWVFNKP 109 The following BLAST results are available for this feature:
BLAST of GT619303 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT619303 ID=GT619303; Name=GT619303; organism=Lens culinaris; type=EST; length=499bpback to top |