GT619643

EST Overview
NameGT619643
Unique NameGT619643
TypeEST
OrganismLens culinaris (lentil)
Sequence length758
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
[Close]
BLAST of GT619643 vs. TrEMBL
Match: C6SXZ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.967e-55
Identity = 114/193 (59.07%), Postives = 141/193 (73.06%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QMLRDRN+LV D E++MSK EFK K+    K  D    K+ KDN  ++I+VFF  + K+GV  +    + M  E V R+ILV Q   +  A T + +++SK  +EVF E ELLVNI EHELVPEHQVLT AEK+ LLE Y+VKETQLPR+ VTDPVARYYGLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   14 IRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
[Close]
BLAST of GT619643 vs. TrEMBL
Match: C6SVA4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.969e-54
Identity = 113/193 (58.55%), Postives = 140/193 (72.54%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QMLRDR +LV D E++MSK EFK K+    K  D    K+ KDN  ++I+VFF  + K+GV  +    + M  E V R+ILV Q   +  A T + +++SK  +EVF E ELLVNI EHELVPEHQVLT AEK+ LLE Y+VKETQLPR+ VTDPVARYYGLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   14 IRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206
[Close]
BLAST of GT619643 vs. TrEMBL
Match: B3TLL2_ELAGV (DNA-directed RNA polymerases II 24 kDa polypeptide OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.334e-53
Identity = 110/193 (56.99%), Postives = 139/193 (72.02%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + RT++QMLRDR YLVLD E++M+K +F EKF    K  D    K  K++P+++I+VFF  D+K+GV  +    + M+ E V R ILV Q   +  A   L +V+ K  +EVF + ELLVNI EH LVPEHQVLT  EK+ LLE Y++KETQLPR+ VTDP+ARYYGLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   12 IRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKNDPADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYMLEVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 204
[Close]
BLAST of GT619643 vs. TrEMBL
Match: B9N7D1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_828412 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.321e-50
Identity = 101/193 (52.33%), Postives = 142/193 (73.58%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QML+DR Y V D E+ M++++F+ K+ N+ K  D    KT +++ S++I+VFF  ++K+GV  +    + M+ E V R+ILV Q   +  A T + ++++K  +EVF E ELLVNI EH LVPEHQVL+  EK+ LLE Y+VKETQLPR+ +TDP+ARYYGLKRGQVV+IIRPSETAG YVTYR V+
Sbjct:   14 IRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVI 206
[Close]
BLAST of GT619643 vs. TrEMBL
Match: O81098_ARATH (AT3g22320/MCB17_5 OS=Arabidopsis thaliana GN=AtRPABC24.3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.843e-50
Identity = 103/193 (53.37%), Postives = 141/193 (73.06%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QMLRDR Y + DSE+ M+KQ+F  K  ++ K  D   LK  +++ S+++++FF  ++K+GV  +    + M+ E V R+ILV Q   +  A T + +++SK  +EVF E E+LVNI EH LVPEHQVLT  EK+ LLE Y+VKETQLPR+ VTDP+ARY+GLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   13 IQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
[Close]
BLAST of GT619643 vs. TrEMBL
Match: D7L1N3_ARALY (ATRPABC24.3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479745 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.555e-50
Identity = 102/193 (52.85%), Postives = 141/193 (73.06%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QML+DR Y + DSE+ M+KQ+F  K  ++ K  D   LK  +++ S+++++FF  ++K+GV  +    + M+ E V R+ILV Q   +  A T + +++SK  +EVF E E+LVNI EH LVPEHQVLT  EK+ LLE Y+VKETQLPR+ VTDP+ARY+GLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   13 IQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
[Close]
BLAST of GT619643 vs. TrEMBL
Match: A9RWG5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206246 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.555e-50
Identity = 105/193 (54.40%), Postives = 137/193 (70.98%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T+++MLRDR+Y+V D E+ +SK++F+EK+ ++ K  D    K  + N +  IFVFF  ++K+GV  +    D M+ E V R+ILV Q   +  A   + ++ASK  +EVF E ELLVNI EH LVP H+VLT  EK+ LLE Y+VKETQLPRM   DPVARYYGLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   16 IRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNNAEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYHLEVFQEAELLVNIKEHVLVPLHEVLTPDEKKTLLERYTVKETQLPRMQENDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 208
[Close]
BLAST of GT619643 vs. TrEMBL
Match: B4FU06_MAIZE (DNA-directed RNA polymerases II 24 kDa polypeptide OS=Zea mays PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.907e-49
Identity = 100/193 (51.81%), Postives = 137/193 (70.98%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + RT++QMLRDR YLV+D E+  S+++F  KF       D    K  K++PS++I+VFF  D K+G+  +    + M  E V R++LV Q   +  A ++L ++  K+ +E+F E E+L+NI EH LVPEHQVLT  EK+ LLE Y++KETQLPR+ +TDP+ARYYGL+RGQVV+IIRPSETAG YVTYR VV
Sbjct:   18 IRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKIHLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
[Close]
BLAST of GT619643 vs. TrEMBL
Match: B9ETS9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_03801 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.253e-49
Identity = 98/193 (50.78%), Postives = 138/193 (71.50%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + RT++QMLRDR YLV++ E+ M +++F  K+       D    K  K++PS++I+VFF  D K+G+  +    + M+ E V R++LV Q   +  A ++L+++  K+ +E+F E ELL+NI EH LVPEHQVL   EK+ LLE Y++KETQLPR+ +TDP+ARYYGL+RGQVV+IIRPSETAG YVTYR VV
Sbjct:   18 IRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEAELLINIKEHVLVPEHQVLNNGEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
[Close]
BLAST of GT619643 vs. TrEMBL
Match: Q5VQW7_ORYSJ (Os01g0805800 protein OS=Oryza sativa subsp. japonica GN=P0034E02.61 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.249e-49
Identity = 98/193 (50.78%), Postives = 138/193 (71.50%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + RT++QMLRDR YLV++ E+ M +++F  K+       D    K  K++PS++I+VFF  D K+G+  +    + M+ E V R++LV Q   +  A ++L+++  K+ +E+F E ELL+NI EH LVPEHQVL   EK+ LLE Y++KETQLPR+ +TDP+ARYYGL+RGQVV+IIRPSETAG YVTYR VV
Sbjct:   18 IRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 210
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_CAEBR (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis briggsae GN=rpb-5 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.447e-46
Identity = 95/198 (47.98%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKF-----DNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T+LQM+ DR YLV   E+D   + FKE F     +      D T L    D+P++++FVFF  D+K+G+  +  I   M+ + + R+I+V Q   +  A   + D+A K  +E FLE EL+VNITEHELVPEH V+T  EK  LL  Y +K++QLPR+   DPVARY+GL+RGQVV+IIRPSETAG Y+TYR+VV
Sbjct:   14 IRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_CAEEL (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Caenorhabditis elegans GN=rpb-5 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.225e-45
Identity = 93/198 (46.97%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKF-----DNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T+LQM+ DR YLV   E+D   + FK ++     +      D T L    D+P++++FVFF  D+K+G+  +  I   M+ + + R+I+V Q   +  A   + D+A K  +E FLE EL+VNITEHELVPEH V+T  EK  LL  Y +K++QLPR+   DPVARY+GL+RGQVV+IIRPSETAG Y+TYR+VV
Sbjct:   14 IRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLTILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIGDMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKLKDSQLPRIQQCDPVARYFGLRRGQVVKIIRPSETAGRYITYRLVV 211
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_RAT (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus GN=Polr2e PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.090e-45
Identity = 92/197 (46.70%), Postives = 130/197 (65.99%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDP-----TYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            + +TI+Q+  DR YLV   E+D + +EFK +F +    G P     T L    D+P++++FVFF  + K+G+  +      M+ E + R+++V Q   +  A   L D+A K  +E FL+ ELL+NITEHELVPEH V+TK E   LL  Y ++E+QLPR+   DPVARY+G+KRGQVV+IIRPSETAG Y+TYR+V
Sbjct:   13 IRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus GN=Polr2e PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.090e-45
Identity = 92/197 (46.70%), Postives = 130/197 (65.99%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDP-----TYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            + +TI+Q+  DR YLV   E+D + +EFK +F +    G P     T L    D+P++++FVFF  + K+G+  +      M+ E + R+++V Q   +  A   L D+A K  +E FL+ ELL+NITEHELVPEH V+TK E   LL  Y ++E+QLPR+   DPVARY+G+KRGQVV+IIRPSETAG Y+TYR+V
Sbjct:   13 IRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_PONAB (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Pongo abelii GN=POLR2E PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.081e-45
Identity = 91/197 (46.19%), Postives = 129/197 (65.48%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDP-----TYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            + +TI+Q+  DR YLV   E+D + +EF+ +F +    G P     T L    D+P++++FVFF  + K+G+  +      M+ E + R+++V Q   +  A   L D+A K  +E FL+ ELL+NITEHELVPEH V+TK E   LL  Y ++E QLPR+   DPVARY+G+KRGQVV+IIRPSETAG Y+TYR+V
Sbjct:   13 IRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Homo sapiens GN=POLR2E PE=1 SV=4)

HSP 1 Score: 179.104 bits (453), Expect = 2.311e-44
Identity = 91/197 (46.19%), Postives = 128/197 (64.97%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDP-----TYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            + +TI+Q+  DR YLV   E+D + +EFK +  +    G P     T L    D+P++++FVFF  + K+G+  +      M+ E + R+++V Q   +  A   L D+A K  +E FL+ ELL+NITEHELVPEH V+TK E   LL  Y ++E QLPR+   DPVARY+G+KRGQVV+IIRPSETAG Y+TYR+V
Sbjct:   13 IRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_BOVIN (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Bos taurus GN=POLR2E PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.311e-44
Identity = 91/197 (46.19%), Postives = 127/197 (64.47%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDP-----TYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            + +TI+Q+  DR YLV    +D + +EFK +F      G P     T L    D+P++++FVFF  + K+G+  +      M+ E + R+++V Q   +  A   L D+A K  +E FL+ ELL+NITEHELVPEH V+TK E   LL  Y ++E QLPR+   DPVARY+G+KRGQVV+IIRPSETAG Y+TYR+V
Sbjct:   13 IRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLV 209
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc1 OS=Dictyostelium discoideum GN=polr2e PE=3 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.736e-37
Identity = 85/195 (43.59%), Postives = 121/195 (62.05%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVAS--KLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T+LQML DR Y++   E +  ++ F  +        + T     KD+P++ I+VFF    K+GV+ +    D M+  +  R+I+V Q   +  A   L + +   K+ +E F E ELLVNIT H+LVP+H +LTK EK  LL  Y +KE+QLPR+   DPVARYYGL RG VV+I+RPSETAG Y+TYR+ V
Sbjct:   10 IRKTVLQMLSDREYIITAYEQEYPRESFVSR-------ENLTMYCVKKDDPTDSIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNITHHQLVPKHILLTKEEKLELLTRYKMKESQLPRIQTNDPVARYYGLSRGHVVKIVRPSETAGRYITYRLCV 197
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Schizosaccharomyces pombe GN=rpb5 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.243e-31
Identity = 74/193 (38.34%), Postives = 113/193 (58.55%), Query Frame = 1 
Query:    7 RTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPT----YLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRI 573
            +T  Q++ DR Y V  +E+D++  +FK       +  D T    Y K S D+    I++ FA++  +G+  +      +     +  IL+     +  A   +  V  +  IE F E +L+VNIT HELVP+H +L+  EK+ LL+ Y ++ETQLPR+ + DPVARY GLKRG+VV+I+R SET+G Y +YRI
Sbjct:   16 KTAHQLVHDRGYGVSQAELDLTLDQFKAMHCGMGRNLDRTTLSFYAKPSNDSNKGTIYIEFAKEPSVGIKEMRTFVHTLGDHNHKTGILIYANSMTPSAAKIIATVTGQFTIETFQESDLIVNITHHELVPKHILLSPDEKKELLDRYKLRETQLPRIQLADPVARYLGLKRGEVVKIVRRSETSGRYNSYRI 208
[Close]
BLAST of GT619643 vs. SwissProt
Match: RPAB1_KLUMA (DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Kluyveromyces marxianus GN=RPB5 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.527e-31
Identity = 76/199 (38.19%), Postives = 117/199 (58.79%), Query Frame = 1 
Query:    7 RTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNK----------IFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRI 573
            RT+ +M+RDR Y +   E+D+S ++FK K+  D+ G     + + + NP+ +          ++V F  ++ +GV  + N    +  +  +  I + Q     P+   +   A+   IE F E  L+VNIT HELVP+H  L+ AEK+ LL+ Y +KE+QLPR+   DPVA Y GLKRG+V++IIR SET+G Y +YRI
Sbjct:   17 RTVKEMVRDRGYFITQEEIDLSLEDFKVKYC-DSMGKPQRKMMSFQSNPTEESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQ-SGITPSANKILPTAAPAVIETFPEASLVVNITHHELVPKHIRLSDAEKKELLKRYRLKESQLPRIQRMDPVALYLGLKRGEVIKIIRKSETSGRYASYRI 213
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT3G22320.1 (| Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:7891045-7892094 REVERSE LENGTH=205)

HSP 1 Score: 202.216 bits (513), Expect = 2.525e-52
Identity = 103/193 (53.37%), Postives = 141/193 (73.06%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            + +T++QMLRDR Y + DSE+ M+KQ+F  K  ++ K  D   LK  +++ S+++++FF  ++K+GV  +    + M+ E V R+ILV Q   +  A T + +++SK  +EVF E E+LVNI EH LVPEHQVLT  EK+ LLE Y+VKETQLPR+ VTDP+ARY+GLKRGQVV+IIRPSETAG YVTYR VV
Sbjct:   13 IQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRNDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVVKIIRPSETAGRYVTYRYVV 205
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT5G57980.1 (| Symbols: RPB5C | RNA polymerase II fifth largest subunit, C | chr5:23469050-23469768 REVERSE LENGTH=210)

HSP 1 Score: 156.762 bits (395), Expect = 1.217e-38
Identity = 87/197 (44.16%), Postives = 125/197 (63.45%), Query Frame = 1 
Query:    1 VHRTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKD---NPSNKIFVFFARDSKLGVSVVTN-IRDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            V RT+LQMLRDR Y + +S++++ ++EF ++F       +   L  S +   NP++KI+VF+    K+GV V+   +   M  +KV R I+V     + PA   + ++   L IEVF E EL+ NITEH+LV ++ VL    K+ LL TY+V++TQLPR+ VTDP+ARYYGLKRGQVV+I R   T+  Y TYR  V
Sbjct:   14 VRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKGPNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKMLTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTVQDTQLPRILVTDPLARYYGLKRGQVVKIRRSDATSLDYYTYRFAV 210
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT2G41340.1 (| Symbols: RPB5D | RNA polymerase II fifth largest subunit, D | chr2:17229026-17230442 FORWARD LENGTH=218)

HSP 1 Score: 114.775 bits (286), Expect = 5.302e-26
Identity = 72/194 (37.11%), Postives = 114/194 (58.76%), Query Frame = 1 
Query:    7 RTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTS---KDNPSNKIFVFFARDSKLGVSVVTNIR-DCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            RT ++MLRDR Y V D ++++S Q+F+  +       D   L+ S   + + S KI V F     + V+ +  I  D + RE +   ILV Q   +  A   ++  + K  +E+F   +LLVN+++H L P+HQVL   EKE+LL+ +S++E QLPR+   DP+ RYYGL+ GQV+++    E + ++VTYR V
Sbjct:   29 RTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHP---DVDLLRISAKHRFDSSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAVELFSFK--VELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCV 217
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT3G57080.1 (| Symbols: RPB5B, NRPE5 | Eukaryotic rpb5 RNA polymerase subunit family protein | chr3:21125878-21127470 FORWARD LENGTH=222)

HSP 1 Score: 107.842 bits (268), Expect = 6.481e-24
Identity = 64/191 (33.51%), Postives = 106/191 (55.50%), Query Frame = 1 
Query:    7 RTILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNI-RDCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIV 576
            R  LQMLRDR Y V D ++++S  +F+  +               + + + K+ + F   S + V+ + ++  D + +E +   ILV Q   +  A   ++  + K  +E+F   +LLVNIT+H L P+HQVL   EK  LL+ +S++E QLPR+   D + RYYGL++GQVV++    E   ++V +R V
Sbjct:   33 RNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSDSTKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAIELFSFK--VEIFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCV 221
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT3G54490.1 (| Symbols: RPB5E | RNA polymerase II fifth largest subunit, E | chr3:20173673-20175297 FORWARD LENGTH=233)

HSP 1 Score: 96.2857 bits (238), Expect = 1.952e-20
Identity = 63/191 (32.98%), Postives = 95/191 (49.74%), Query Frame = 1 
Query:   10 TILQMLRDRNYLVLDSEVDMSKQEFKEKFDNDTKGGDPTYLKTSKDNPSNKIFVFFARDSKLGVSVVTNIR-DCMEREKVERSILVCQCKPSVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLETYSVKETQLPRMFVTDPVARYYGLKRGQVVRIIRPSETAGTYVTYRIVV 579
            T  +MLRDR Y V ++E+ ++  EF+  F    +          + +P  KI V F     + V  V  +         +   ILV Q K +  A   L        +E F  ++LLVNIT+H   P+ ++L K EKE LL  +++++ QLP +   D   RYYGLK+ QVV+I    E  G +VTYR ++
Sbjct:   45 TAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKKKILVVFMGTEPITVKSVRALHIQISNNVGLHAMILVLQSKMNHFAQKAL--TTFPFTVETFPIEDLLVNITKHIQQPKIEILNKEEKEQLLRKHALEDKQLPYLQEKDSFVRYYGLKKKQVVKITYSKEPVGDFVTYRCII 233
[Close]
BLAST of GT619643 vs. TAIR peptide
Match: AT3G16680.1 (| Symbols: | DNA binding;DNA-directed RNA polymerases | chr3:5683697-5684130 FORWARD LENGTH=87)

HSP 1 Score: 50.8322 bits (120), Expect = 9.403e-7
Identity = 33/72 (45.83%), Postives = 40/72 (55.56%), Query Frame = 1 
Query:  223 DCMEREKVERSILVCQCKP--SVPATTYLKDVASKLCIEVFLEDELLVNITEHELVPEHQVLTKAEKENLLE 432
            D ++   V R+ILV Q     S  A  +L  V     IEVF E EL+VN+ EH  VPEHQ LT  EK+  LE
Sbjct:    6 DQLKSANVFRAILVVQDIKAFSRQALVFLGAVYPIFHIEVFQEKELIVNVKEHVFVPEHQALTTEEKQKFLE 77
The following BLAST results are available for this feature:
BLAST of GT619643 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SXZ4_SOYBN3.967e-5559.07Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVA4_SOYBN1.969e-5458.55Putative uncharacterized protein OS=Glycine max PE... [more]
B3TLL2_ELAGV6.334e-5356.99DNA-directed RNA polymerases II 24 kDa polypeptide... [more]
B9N7D1_POPTR1.321e-5052.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
O81098_ARATH3.843e-5053.37AT3g22320/MCB17_5 OS=Arabidopsis thaliana GN=AtRPA... [more]
D7L1N3_ARALY6.555e-5052.85ATRPABC24.3 OS=Arabidopsis lyrata subsp. lyrata GN... [more]
A9RWG5_PHYPA6.555e-5054.40Predicted protein OS=Physcomitrella patens subsp. ... [more]
B4FU06_MAIZE1.907e-4951.81DNA-directed RNA polymerases II 24 kDa polypeptide... [more]
B9ETS9_ORYSJ3.253e-4950.78Putative uncharacterized protein OS=Oryza sativa s... [more]
Q5VQW7_ORYSJ4.249e-4950.78Os01g0805800 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GT619643 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RPAB1_CAEBR1.447e-4647.98DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_CAEEL1.225e-4546.97DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_RAT2.090e-4546.70DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_MOUSE2.090e-4546.70DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_PONAB6.081e-4546.19DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_HUMAN2.311e-4446.19DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_BOVIN2.311e-4446.19DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_DICDI2.736e-3743.59DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_SCHPO2.243e-3138.34DNA-directed RNA polymerases I, II, and III subuni... [more]
RPAB1_KLUMA6.527e-3138.19DNA-directed RNA polymerases I, II, and III subuni... [more]
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BLAST of GT619643 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT3G22320.12.525e-5253.37| Symbols: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Euka... [more]
AT5G57980.11.217e-3844.16| Symbols: RPB5C | RNA polymerase II fifth largest... [more]
AT2G41340.15.302e-2637.11| Symbols: RPB5D | RNA polymerase II fifth largest... [more]
AT3G57080.16.481e-2433.51| Symbols: RPB5B, NRPE5 | Eukaryotic rpb5 RNA poly... [more]
AT3G54490.11.952e-2032.98| Symbols: RPB5E | RNA polymerase II fifth largest... [more]
AT3G16680.19.403e-745.83| Symbols: | DNA binding;DNA-directed RNA polymer... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000783RNA polymerase, subunit H/Rpb5 C-terminalGENE3D3.90.940.20no descriptioncoord: 121..193
score: 1.5
IPR000783RNA polymerase, subunit H/Rpb5 C-terminalPFAMPF01191RNA_pol_Rpb5_Ccoord: 120..193
score: 1.6
IPR000783RNA polymerase, subunit H/Rpb5 C-terminalSUPERFAMILY55287RPB5-like RNA polymerase subunitcoord: 122..193
score: 5
IPR005571RNA polymerase, Rpb5, N-terminalGENE3D3.40.1340.10no descriptioncoord: 1..120
score: 1
IPR005571RNA polymerase, Rpb5, N-terminalPFAMPF03871RNA_pol_Rpb5_Ncoord: 1..73
score: 1.5
IPR005571RNA polymerase, Rpb5, N-terminalSUPERFAMILY53036Eukaryotic RPB5 N-terminal domaincoord: 1..121
score: 3.5
IPR014381DNA-directed RNA polymerase, RPB5 subunitPIRPIRSF000747DNA-directed RNA polymerase, RPB5 subunitcoord: 1..193
score: 1.8
IPR020608RNA polymerase, subunit H/Rpb5, conserved sitePROSITEPS01110RNA_POL_H_23KDcoord: 125..138
score
NoneNo IPR availablePANTHERPTHR10535DNA-DIRECTED RNA POLYMERASE IIcoord: 1..193
score: 5.6
NoneNo IPR availableSEGsegsegcoord: 41..51
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619643 ID=GT619643; Name=GT619643; organism=Lens culinaris; type=EST; length=758bp
GTTCACAGAACAATTTTACAAATGTTAAGAGACAGAAACTACCTCGTCCT
AGACTCTGAGGTAGATATGTCGAAACAAGAGTTCAAAGAAAAGTTTGACA
ATGACACGAAGGGAGGAGACCCGACTTATCTCAAAACTAGCAAAGACAAT
CCTTCCAACAAAATCTTTGTTTTCTTTGCCCGTGATTCCAAACTCGGTGT
CAGCGTTGTTACGAATATCCGTGACTGTATGGAGAGGGAGAAAGTCGAGA
GATCTATCCTTGTTTGTCAATGTAAACCGTCTGTCCCTGCAACAACCTAT
CTTAAGGACGTGGCCTCCAAACTTTGTATTGAAGTCTTTCTGGAGGATGA
ATTGCTGGTGAACATAACAGAGCACGAGCTTGTGCCGGAACATCAAGTGC
TCACCAAGGCTGAGAAGGAAAACTTGCTCGAGACATACTCTGTCAAAGAA
ACTCAGCTACCTAGAATGTTTGTGACGGATCCTGTTGCGCGATATTATGG
ACTCAAGCGTGGACAAGTTGTCCGGATAATCCGGCCAAGCGAGACTGCAG
GCACATATGTTACATACCGAATTGTTGTATAAGAATTTCCTTGAGCTCAT
CTGCTATACTACTTTTGTAATGTTACCTACTAATATTTATGCAAAGCTTG
CATTCTATAACCTGTATTTTTGGTGGAGTTCGATTTAAATGGTTTGGTTA
TGTTATTGGTGTTACTTAAACTATTCTTATATTTGATTTGATTTGGTTTT
AGGTTTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006350transcription
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR000783RNA_pol_subH/Rpb5_C
IPR005571RNA_pol_Rpb5_N
IPR014381Arch_Rpo5/euc_Rpb5
IPR020608RNA_pol_subH/Rpb5_CS