GT620618
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620618 vs. TrEMBL
Match: D7SJE8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008477001 PE=4 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.482e-34 Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQC+ SV E E++ + LGA + L+SDVLLQLS+LCNANFI KG SCP+EGSTRYR+TISE+LALKVARSLKFPLSKYLYR Sbjct: 401 KRKSSEKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYR 523
BLAST of GT620618 vs. TrEMBL
Match: B9I8K9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_900024 PE=4 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.557e-32 Identity = 77/124 (62.10%), Postives = 87/124 (70.16%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSN-ELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRKAS GPGTFPLERL+AIFQCI S A+ +EE N +G +C L+SDVLLQLS+LCNANFI KG SCP+EGSTRYRST+SE+LALKVARSLKFPL YLYR Sbjct: 415 KRKASEKSMEQKEVAEQELLMKGPGTFPLERLLAIFQCITSAADSLDEEEHENDVLRVGGDCG---LMSDVLLQLSSLCNANFIIKGGSCPLEGSTRYRSTVSEDLALKVARSLKFPLPNYLYR 535
BLAST of GT620618 vs. TrEMBL
Match: Q94HA9_ORYSJ (Putative origin recognition complex subunit OS=Oryza sativa subsp. japonica GN=OSJNBb0048A17.14 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ DE + N + +E L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 331 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 452
BLAST of GT620618 vs. TrEMBL
Match: Q852R2_ORYSJ (Origin recognition complex 5 OS=Oryza sativa subsp. japonica GN=ORC5 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ DE + N + +E L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 331 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPDN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 452
BLAST of GT620618 vs. TrEMBL
Match: Q10CI8_ORYSJ (Origin recognition complex subunit 5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os03g0759500 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ DE + N + +E L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523
BLAST of GT620618 vs. TrEMBL
Match: B9F5T4_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_12664 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ DE + N + +E L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523
BLAST of GT620618 vs. TrEMBL
Match: B8AK78_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13614 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30 Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ DE + N + +E L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523
BLAST of GT620618 vs. TrEMBL
Match: Q6EWX0_ARATH (Origin recognition complex 5 subunit OS=Arabidopsis thaliana GN=orc5 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.417e-30 Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEE-EPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRKAS GPG+FPLERL+AIFQCI SV + + EE E N G + N +L+SD+LLQ+S+LC+ANF+ K SCP+EGS RYRS +SE+LA KVA+SL FPLSKYLYR Sbjct: 410 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLLAIFQCIASVGDSSFGEEDEEEENTTGYDKENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLAQKVAKSLSFPLSKYLYR 533
BLAST of GT620618 vs. TrEMBL
Match: D7MCG3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657063 PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.818e-29 Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNE---LGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRKAS GPG+FPLERL+AIFQCI SV + + EE E G + N +L+SD+LLQ+S+LC+ANF+ K SCP+EGS RYRS +SE+LALKVA+SL FPL+KYLYR Sbjct: 409 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLMAIFQCIASVGDSSFGEENEGEEEEDATGYDRENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLALKVAKSLSFPLAKYLYR 534
BLAST of GT620618 vs. TrEMBL
Match: B6SPL4_MAIZE (Origin recognition complex subunit 5 OS=Zea mays PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.818e-29 Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRK+S GPGTFPLERL+AIFQCI SV+E+ + E + + + G L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR Sbjct: 400 KRKSSQASMNMKDTMAEEMLMKGPGTFPLERLLAIFQCITSVSEDDLGDVECSDSMMNGSGMTG-LMSDVLLQLSTLCNSNFLSKSRSCPMEGSARYRSNIDEDLALKVARSVSFPLSKYIYR 521
BLAST of GT620618 vs. TAIR peptide
Match: AT4G29910.1 (| Symbols: ORC5, ATORC5 | origin recognition complex protein 5 | chr4:14628154-14630055 REVERSE LENGTH=534) HSP 1 Score: 134.42 bits (337), Expect = 5.240e-32 Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 3 Query: 3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEE-EPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371 KRKAS GPG+FPLERL+AIFQCI SV + + EE E N G + N +L+SD+LLQ+S+LC+ANF+ K SCP+EGS RYRS +SE+LA KVA+SL FPLSKYLYR Sbjct: 410 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLLAIFQCIASVGDSSFGEEDEEEENTTGYDKENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLAQKVAKSLSFPLSKYLYR 533 The following BLAST results are available for this feature:
BLAST of GT620618 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620618 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620618 ID=GT620618; Name=GT620618; organism=Lens culinaris; type=EST; length=662bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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