GT620618

EST Overview
NameGT620618
Unique NameGT620618
TypeEST
OrganismLens culinaris (lentil)
Sequence length662
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
KEGG analysis for Lens culinaris unigene v12011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT620618 vs. TrEMBL
Match: D7SJE8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008477001 PE=4 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.482e-34
Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQC+ SV E    E++  +  LGA   +  L+SDVLLQLS+LCNANFI KG SCP+EGSTRYR+TISE+LALKVARSLKFPLSKYLYR
Sbjct:  401 KRKSSEKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDSGLMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYR 523          
BLAST of GT620618 vs. TrEMBL
Match: B9I8K9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_900024 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.557e-32
Identity = 77/124 (62.10%), Postives = 87/124 (70.16%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSN-ELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRKAS                 GPGTFPLERL+AIFQCI S A+   +EE  N    +G +C    L+SDVLLQLS+LCNANFI KG SCP+EGSTRYRST+SE+LALKVARSLKFPL  YLYR
Sbjct:  415 KRKASEKSMEQKEVAEQELLMKGPGTFPLERLLAIFQCITSAADSLDEEEHENDVLRVGGDCG---LMSDVLLQLSSLCNANFIIKGGSCPLEGSTRYRSTVSEDLALKVARSLKFPLPNYLYR 535          
BLAST of GT620618 vs. TrEMBL
Match: Q94HA9_ORYSJ (Putative origin recognition complex subunit OS=Oryza sativa subsp. japonica GN=OSJNBb0048A17.14 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+  DE +   N + +E     L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  331 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 452          
BLAST of GT620618 vs. TrEMBL
Match: Q852R2_ORYSJ (Origin recognition complex 5 OS=Oryza sativa subsp. japonica GN=ORC5 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+  DE +   N + +E     L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  331 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPDN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 452          
BLAST of GT620618 vs. TrEMBL
Match: Q10CI8_ORYSJ (Origin recognition complex subunit 5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os03g0759500 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+  DE +   N + +E     L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523          
BLAST of GT620618 vs. TrEMBL
Match: B9F5T4_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_12664 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+  DE +   N + +E     L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523          
BLAST of GT620618 vs. TrEMBL
Match: B8AK78_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13614 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 71/123 (57.72%), Postives = 86/123 (69.92%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+  DE +   N + +E     L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  402 KRKSSQASMHMKDTIVEEMLMKGPGTFPLERLLAIFQCITSVSEDILDEIDCPGN-MASESGTTGLMSDVLLQLSTLCNSNFLSKSRSCPLEGSARYRSNIDEDLALKVARSVNFPLSKYMYR 523          
BLAST of GT620618 vs. TrEMBL
Match: Q6EWX0_ARATH (Origin recognition complex 5 subunit OS=Arabidopsis thaliana GN=orc5 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.417e-30
Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEE-EPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRKAS                 GPG+FPLERL+AIFQCI SV +  + EE E   N  G +  N +L+SD+LLQ+S+LC+ANF+ K  SCP+EGS RYRS +SE+LA KVA+SL FPLSKYLYR
Sbjct:  410 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLLAIFQCIASVGDSSFGEEDEEEENTTGYDKENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLAQKVAKSLSFPLSKYLYR 533          
BLAST of GT620618 vs. TrEMBL
Match: D7MCG3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657063 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.818e-29
Identity = 68/126 (53.97%), Postives = 85/126 (67.46%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNE---LGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRKAS                 GPG+FPLERL+AIFQCI SV +  + EE     E    G +  N +L+SD+LLQ+S+LC+ANF+ K  SCP+EGS RYRS +SE+LALKVA+SL FPL+KYLYR
Sbjct:  409 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLMAIFQCIASVGDSSFGEENEGEEEEDATGYDRENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLALKVAKSLSFPLAKYLYR 534          
BLAST of GT620618 vs. TrEMBL
Match: B6SPL4_MAIZE (Origin recognition complex subunit 5 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.818e-29
Identity = 69/123 (56.10%), Postives = 85/123 (69.11%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEEEPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRK+S                 GPGTFPLERL+AIFQCI SV+E+   + E + + +      G L+SDVLLQLSTLCN+NF+ K +SCP+EGS RYRS I E+LALKVARS+ FPLSKY+YR
Sbjct:  400 KRKSSQASMNMKDTMAEEMLMKGPGTFPLERLLAIFQCITSVSEDDLGDVECSDSMMNGSGMTG-LMSDVLLQLSTLCNSNFLSKSRSCPMEGSARYRSNIDEDLALKVARSVSFPLSKYIYR 521          
BLAST of GT620618 vs. TAIR peptide
Match: AT4G29910.1 (| Symbols: ORC5, ATORC5 | origin recognition complex protein 5 | chr4:14628154-14630055 REVERSE LENGTH=534)

HSP 1 Score: 134.42 bits (337), Expect = 5.240e-32
Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 3
Query:    3 KRKASXXXXXXXXXXXXXXXXXGPGTFPLERLIAIFQCIVSVAEEPYDEE-EPNSNELGAECSNGSLISDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENLALKVARSLKFPLSKYLYR 371
            KRKAS                 GPG+FPLERL+AIFQCI SV +  + EE E   N  G +  N +L+SD+LLQ+S+LC+ANF+ K  SCP+EGS RYRS +SE+LA KVA+SL FPLSKYLYR
Sbjct:  410 KRKASEKSMEKKEIAEQEAVMKGPGSFPLERLLAIFQCIASVGDSSFGEEDEEEENTTGYDKENNNLMSDILLQVSSLCDANFLIKSGSCPLEGSIRYRSMVSEDLAQKVAKSLSFPLSKYLYR 533          
The following BLAST results are available for this feature:
BLAST of GT620618 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SJE8_VITVI6.482e-3462.60Whole genome shotgun sequence of line PN40024, sca... [more]
B9I8K9_POPTR3.557e-3262.10Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q94HA9_ORYSJ1.952e-3057.72Putative origin recognition complex subunit OS=Ory... [more]
Q852R2_ORYSJ1.952e-3057.72Origin recognition complex 5 OS=Oryza sativa subsp... [more]
Q10CI8_ORYSJ1.952e-3057.72Origin recognition complex subunit 5, putative, ex... [more]
B9F5T4_ORYSJ1.952e-3057.72Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AK78_ORYSI1.952e-3057.72Putative uncharacterized protein OS=Oryza sativa s... [more]
Q6EWX0_ARATH7.417e-3055.65Origin recognition complex 5 subunit OS=Arabidopsi... [more]
D7MCG3_ARALY2.818e-2953.97Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B6SPL4_MAIZE2.818e-2956.10Origin recognition complex subunit 5 OS=Zea mays P... [more]
back to top
BLAST of GT620618 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G29910.15.240e-3255.65| Symbols: ORC5, ATORC5 | origin recognition compl... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020796Origin recognition complex, subunit 5PANTHERPTHR12705ORIGIN RECOGNITION COMPLEX SUBUNIT 5coord: 1..124
score: 6.8
NoneNo IPR availableSEGsegsegcoord: 6..22
score
NoneNo IPR availableSEGsegsegcoord: 57..69
score
NoneNo IPR availableSEGsegsegcoord: 69..81
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620618 ID=GT620618; Name=GT620618; organism=Lens culinaris; type=EST; length=662bp
GAAAGAGGAAGGCCTCCGAGAAAGTGCTGGAAAAGAAAGAGATTTTAGAA
GAAGAACTACTGATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTGAT
AGCCATCTTTCAGTGTATTGTATCTGTTGCAGAAGAGCCATATGATGAAG
AGGAACCAAACAGCAATGAGTTAGGAGCTGAATGTAGCAATGGTTCACTG
ATCTCTGATGTTCTTTTGCAGCTATCCACTCTCTGTAATGCTAATTTTAT
TTTCAAAGGAAAAAGCTGCCCAATTGAGGGCTCAACTCGGTATCGATCAA
CTATATCTGAAAACCTGGCCTTAAAGGTTGCAAGAAGCCTAAAGTTCCCA
TTGTCAAAGTATTTGTACAGAAATTAGTAATCTCTGACAATTGACAGCTT
CACAGAGCTTGGTTGTCAAAATTTTGCCTGATAGATCTGTATACAACCTT
CACTGTTATCTAAGTAGTTAATATAAATGGTTGGAATACTAAGAATGTTT
GGAACCAAGCCAACATTGAAATGAATTATTATGACCATTGCAGTTCACTG
GATGGATGGAATATGTATTTTATAGGATTTCTTTTATTGTTCCTTGTCTT
CAATATTGTCCCCAAAAGTGTTTGTAATATTGTTGATTGCAAGTAGTAAA
GATCCTGAAACT
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0000808origin recognition complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: INTERPRO
TermDefinition
IPR020796ORC5