GT621165

EST Overview
NameGT621165
Unique NameGT621165
TypeEST
OrganismLens culinaris (lentil)
Sequence length855
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
KEGG analysis for Lens culinaris unigene v12011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT621165 vs. TrEMBL
Match: B9SJ03_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0597470 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.849e-50
Identity = 119/268 (44.40%), Postives = 158/268 (58.96%), Query Frame = 1
Query:  130 GISDSEVENNSVKNMEISDSVDQ--ENELEA---EKPVQSEQECDNNSLKEKKDLQLKVDLEFTETVVKSEEGVRETVHAAETVGVS-------LKDQSPNGSVEIGRR--------------GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            G  DSE+   +VK  E S   +   EN ++A   E  +  +    N  +  ++  Q  V+ +    +V S   ++  +  AE V VS        +  + N  ++                  GVKRAR+    N  QPSVHV Y SLTRASK+KLEELLQQWS WH +  SSS DL+EVLES E+T+FPA+CVG E +S+VSFW+ENQT   +N D+   D +SVPLYDRG+A+GL S DG SN +GGLEI++  +RCFNCGSYSHA
Sbjct:  125 GSKDSELNEENVKTEECSAVQENLGENLVDAVTEEDTIDRDYLFLNQGVVREEGAQCLVETDVDMDLVDSPV-MQVNIEVAEAVAVSGNLSSFGFRLNAQNSCLDTQNESLIQNHMMKGGHVSGVKRARIAY--NEQQPSVHVTYNSLTRASKRKLEELLQQWSEWHVQRGSSSQDLNEVLESGEETYFPALCVGTEKSSAVSFWIENQTKKQLNNDLISSDSDSVPLYDRGFAIGLTSTDGPSNVEGGLEIVNEAARCFNCGSYSHA 389          
BLAST of GT621165 vs. TrEMBL
Match: D7SMR7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_83.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036455001 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.323e-47
Identity = 117/280 (41.79%), Postives = 167/280 (59.64%), Query Frame = 1
Query:   46 PLEFHSLCSSLGN*VYVKMDMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKP-------VQSEQECDNNSLKEKKDLQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR---GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            P    S+C S  N      ++++     G +DS   N+ VK  +++     +N+++ EK        V  +++  +  L  +  +++   +  T+ +  S  GV       E   ++  D+ P G+  I      GVKRAR+T+D+   QPSVHVIY SLTR SK+KLEELLQQWS WHAK+VSSS+D    L+S EKT+FPA+ VG   +S+VSFW++NQT    + +   +D +SVPLYDRG+ALGL S DG S  +G LEIID  SRCFNCGSY+H+
Sbjct:  600 PAPSGSVCGSEDN------ELHNSNPEPGEADSSSSNSEVKEDKLNIESLMQNKVDFEKVDSRLTPGVVLDKDLVDKQLTSQGSVEVTETIVVTKLINSSSSGV-----PTENGCLTAPDEGPIGNHMIDGTSISGVKRARLTIDEQ--QPSVHVIYNSLTRDSKRKLEELLQQWSEWHAKYVSSSHDPKGQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRKQQDKEFISLDGDSVPLYDRGFALGLVSEDGQSKPEGALEIIDA-SRCFNCGSYNHS 865          
BLAST of GT621165 vs. TrEMBL
Match: B9H3R3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_759262 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.238e-45
Identity = 112/257 (43.58%), Postives = 151/257 (58.75%), Query Frame = 1
Query:  121 SSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKVD--------LEFTETVVKSEEGVRETVHAAETVGVSLKDQ---SPNGS-VEIGRRGVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            S +G+SDS  +  S +  E  D  D+E+    E  V +++   N    E  +  +  D        +E  E  V + EG +        VGV   D+    P  S ++    GVKR R+T   N  QPSVHV+Y SLTRASKKKLEELLQQWS WHA+  SSS+D  E+L+S E T+FPA+ +G   +S+V+FW+ENQT    +  + P+  N VPLYDRGYALGL SADG  N + GLEI+   +RC+NC SY+H+
Sbjct:   11 SDLGLSDSHSQLGSNETKESKD--DEESVELNEGAVGNDERMKNGESVELNEGAVGNDERMKNGESVELNEGAVGNNEGTKNGEGFELNVGVIGNDEVTVDPGYSALKANVSGVKRKRITY--NEEQPSVHVMYNSLTRASKKKLEELLQQWSEWHAQQNSSSHDSDEMLQSGEDTYFPALRIGMVKSSAVTFWIENQTRKQQDNAIIPLQSNYVPLYDRGYALGLTSADGPINIERGLEIVGDAARCYNCASYNHS 263          
BLAST of GT621165 vs. TrEMBL
Match: B9N1Z8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_266119 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 8.307e-42
Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = 1
Query:  421 GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            GVKR R+  D+   QPSVHV+Y SLTR+ K+KLEELLQQWS WHA+  +SS+D +E+L+S E T+FPA+ VG E +S+VSFW+ENQ     + D+     N VPLYDRGY LGL SADG  N +GGLEI+D  +RCFNCG+Y+H+
Sbjct:    2 GVKRKRMAYDEQ--QPSVHVMYNSLTRSGKQKLEELLQQWSEWHAQQ-NSSHDSNEMLQSGEDTYFPALRVGMEKSSAVSFWIENQARKQQDNDLILQHSNFVPLYDRGYVLGLTSADGPINVEGGLEIVDAAARCFNCGAYNHS 143          
BLAST of GT621165 vs. TrEMBL
Match: Q93YW4_ARATH (Putative uncharacterized protein At5g38600 OS=Arabidopsis thaliana GN=At5g38600 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.157e-41
Identity = 105/259 (40.54%), Postives = 153/259 (59.07%), Query Frame = 1
Query:  103 DMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKV------DLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEII-DVPSRCFNCGSYSHA 855
            D+ D+P+S     SEV+ NS+++   S         EA   V +++    N   +  +  L++          TE V        E+V   E +G+  +    + ++++  + GVKR R + D+   QP+VHV YK LTRASK+KLE LLQ+WS W A++ S + D  ++ ES E+T FPA+ VG + TSSVSFW++NQT +    D   ++ ++ PLYDR +A+GLNSADGS N +GGLEII D P RCFNCG YSH+
Sbjct:    5 DVLDIPASSNFG-SEVKKNSLESGNGSP--------EANSLVGNDENVKGNLDLDLTEENLRIVGGQESGEILTEQVSDVFNASVESVAVDEKLGIQKETLVHSTTLDVSSKAGVKRPRTSYDEQ--QPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTSLAQDQEQLFESGEETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRKFAIGLNSADGSRNVEGGLEIIDDDPPRCFNCGGYSHS 252          
BLAST of GT621165 vs. TrEMBL
Match: D7KV08_ARALY (Proline-rich spliceosome-associated family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475818 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 3.490e-40
Identity = 93/204 (45.59%), Postives = 129/204 (63.24%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEG----------VRETVHAA-ETVGVSLKDQSPNGSVEIGRRGVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G          VR+ V+ + ETV V +  +S          GVKR R    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLES ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+SA GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGEASIVEVRDAVNVSVETVKVDVSSKS----------GVKRPRTISLEQ--QPSVHVTYKHLTRNSKQKLESLLQQWSEWEAEQNSFSEDQEQVLESGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDSAGGSNNMEGGLEIIDDPPRCFNCGAYSHS 209          
BLAST of GT621165 vs. TrEMBL
Match: D7MJW9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494108 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 8.597e-39
Identity = 102/244 (41.80%), Postives = 140/244 (57.38%), Query Frame = 1
Query:  172 MEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKVDLEFTE----TVVKSEEG----------VRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLE-IIDVPSRCFNCGSYSHA 855
            ME  D +D    LE+            N    K +L ++ DL+ TE    TV   E G             +V   E VG+  +      ++++  + GVKR R + D+   Q +VHV YK LTRASK+KLE LL+QWS W A++ S   D  + LES E+T+FPA+ VG + TSSVSFW++NQT      +   ++ ++ PLYDR +A+GLNSADGS N +GGLE I D P RCFNCG+YSH+
Sbjct:    1 MEAEDVLD----LESGNGSPEANSLVGNDENMKGNLDVEKDLDLTEENLRTVGGGESGEILTEQVSDVFNASVAVDEKVGIQKETLVHRTTLDVSSKAGVKRPRTSFDEQ--QSTVHVTYKDLTRASKQKLESLLRQWSEWEAENTSLVQDQVQPLESGEETYFPALRVGLQKTSSVSFWIDNQTGPKPLEEFVLVESSTTPLYDRKFAIGLNSADGSRNLEGGLENIDDDPPRCFNCGAYSHS 238          
BLAST of GT621165 vs. TrEMBL
Match: Q8LD15_ARATH (At1g67210 OS=Arabidopsis thaliana GN=At1g67210 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G      +   VG ++  +     V++  + GVKRAR    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLE+ ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+S  GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207          
BLAST of GT621165 vs. TrEMBL
Match: Q3ECG9_ARATH (Putative uncharacterized protein At1g67210.2 OS=Arabidopsis thaliana GN=At1g67210 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G      +   VG ++  +     V++  + GVKRAR    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLE+ ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+S  GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207          
BLAST of GT621165 vs. TrEMBL
Match: A0MEE9_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G      +   VG ++  +     V++  + GVKRAR    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLE+ ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+S  GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207          
BLAST of GT621165 vs. TAIR peptide
Match: AT5G38600.1 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr5:15457386-15460466 FORWARD LENGTH=532)

HSP 1 Score: 172.94 bits (437), Expect = 1.975e-43
Identity = 105/259 (40.54%), Postives = 153/259 (59.07%), Query Frame = 1
Query:  103 DMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKV------DLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEII-DVPSRCFNCGSYSHA 855
            D+ D+P+S     SEV+ NS+++   S         EA   V +++    N   +  +  L++          TE V        E+V   E +G+  +    + ++++  + GVKR R + D+   QP+VHV YK LTRASK+KLE LLQ+WS W A++ S + D  ++ ES E+T FPA+ VG + TSSVSFW++NQT +    D   ++ ++ PLYDR +A+GLNSADGS N +GGLEII D P RCFNCG YSH+
Sbjct:    5 DVLDIPASSNFG-SEVKKNSLESGNGSP--------EANSLVGNDENVKGNLDLDLTEENLRIVGGQESGEILTEQVSDVFNASVESVAVDEKLGIQKETLVHSTTLDVSSKAGVKRPRTSYDEQ--QPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTSLAQDQEQLFESGEETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRKFAIGLNSADGSRNVEGGLEIIDDDPPRCFNCGGYSHS 252          
BLAST of GT621165 vs. TAIR peptide
Match: AT1G67210.2 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr1:25141339-25143774 FORWARD LENGTH=403)

HSP 1 Score: 164.081 bits (414), Expect = 9.175e-41
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G      +   VG ++  +     V++  + GVKRAR    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLE+ ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+S  GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207          
BLAST of GT621165 vs. TAIR peptide
Match: AT1G67210.1 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr1:25141339-25143774 FORWARD LENGTH=405)

HSP 1 Score: 164.081 bits (414), Expect = 9.175e-41
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1
Query:  277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855
            + ++ D++ TE   ++  G      +   VG ++  +     V++  + GVKRAR    +   QPSVHV YK LTR SK+KLE LLQQWS W A+  S S D  +VLE+ ++T+FPA+ VG + TSSVSFW + QT +  +    P++ ++ PLY+RG+ +GL+S  GS+N +GGLEIID P RCFNCG+YSH+
Sbjct:   18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207          
The following BLAST results are available for this feature:
BLAST of GT621165 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SJ03_RICCO2.849e-5044.40Nucleic acid binding protein, putative OS=Ricinus ... [more]
D7SMR7_VITVI1.323e-4741.79Whole genome shotgun sequence of line PN40024, sca... [more]
B9H3R3_POPTR1.238e-4543.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N1Z8_POPTR8.307e-4258.62Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q93YW4_ARATH3.157e-4140.54Putative uncharacterized protein At5g38600 OS=Arab... [more]
D7KV08_ARALY3.490e-4045.59Proline-rich spliceosome-associated family protein... [more]
D7MJW9_ARALY8.597e-3941.80Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8LD15_ARATH1.466e-3844.85At1g67210 OS=Arabidopsis thaliana GN=At1g67210 PE=... [more]
Q3ECG9_ARATH1.466e-3844.85Putative uncharacterized protein At1g67210.2 OS=Ar... [more]
A0MEE9_ARATH1.466e-3844.85Putative uncharacterized protein (Fragment) OS=Ara... [more]
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BLAST of GT621165 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G38600.11.975e-4340.54| Symbols: | Proline-rich spliceosome-associated ... [more]
AT1G67210.29.175e-4144.85| Symbols: | Proline-rich spliceosome-associated ... [more]
AT1G67210.19.175e-4144.85| Symbols: | Proline-rich spliceosome-associated ... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13316ZINC FINGER, CCHC DOMAIN CONTAINING 8coord: 139..255
score: 6.4
NoneNo IPR availableSEGsegsegcoord: 8..31
score: NAcoord: 59..78
score
NoneNo IPR availableSEGsegsegcoord: 2..25
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT621165 ID=GT621165; Name=GT621165; organism=Lens culinaris; type=EST; length=855bp
AACTGCGAAATCTTTCTAGGGTTCTTCAATCCTTCACTCCCTCAACCACT
CGAATTTCACTCTCTCTGTTCATCTTTAGGAAATTAGGTTTATGTGAAAA
TGGATATGAATGATGTTCCTTCTTCTGTGGGAATTTCTGATTCTGAAGTC
GAAAACAACAGTGTCAAGAACATGGAAATAAGTGATTCTGTGGATCAGGA
GAATGAGCTGGAAGCTGAAAAGCCAGTTCAATCTGAACAAGAGTGTGATA
ATAATTCTTTGAAAGAAAAGAAGGATTTGCAATTGAAAGTGGATTTGGAG
TTTACCGAGACGGTTGTGAAATCAGAGGAGGGAGTAAGAGAAACCGTGCA
TGCTGCTGAGACTGTTGGCGTTTCTCTCAAAGACCAAAGTCCCAATGGAA
GCGTCGAGATCGGTAGAAGAGGTGTTAAAAGAGCCAGGGTTACTGTTGAT
GATAATGGACATCAGCCTTCTGTTCATGTTATTTACAAGTCCCTGACAAG
AGCTAGTAAAAAAAAGCTTGAGGAATTACTACAGCAATGGTCCCACTGGC
ATGCTAAACATGTTTCCTCATCCAATGATCTTAGCGAAGTGTTGGAATCT
AGCGAGAAAACTTTTTTTCCTGCTGTGTGTGTTGGACATGAATCAACATC
TTCTGTGTCATTCTGGATGGAGAATCAGACAATGAACGGTATAAACACAG
ATGTTAGTCCTATAGATGATAATTCCGTGCCTCTATATGATCGCGGATAT
GCATTGGGATTGAATTCAGCTGATGGTTCAAGTAATGCCGACGGTGGTCT
GGAAATCATAGATGTTCCTTCCAGGTGTTTCAATTGTGGTTCATACAGTC
ATGCT
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