GT621165
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT621165 vs. TrEMBL
Match: B9SJ03_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0597470 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.849e-50 Identity = 119/268 (44.40%), Postives = 158/268 (58.96%), Query Frame = 1 Query: 130 GISDSEVENNSVKNMEISDSVDQ--ENELEA---EKPVQSEQECDNNSLKEKKDLQLKVDLEFTETVVKSEEGVRETVHAAETVGVS-------LKDQSPNGSVEIGRR--------------GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 G DSE+ +VK E S + EN ++A E + + N + ++ Q V+ + +V S ++ + AE V VS + + N ++ GVKRAR+ N QPSVHV Y SLTRASK+KLEELLQQWS WH + SSS DL+EVLES E+T+FPA+CVG E +S+VSFW+ENQT +N D+ D +SVPLYDRG+A+GL S DG SN +GGLEI++ +RCFNCGSYSHA Sbjct: 125 GSKDSELNEENVKTEECSAVQENLGENLVDAVTEEDTIDRDYLFLNQGVVREEGAQCLVETDVDMDLVDSPV-MQVNIEVAEAVAVSGNLSSFGFRLNAQNSCLDTQNESLIQNHMMKGGHVSGVKRARIAY--NEQQPSVHVTYNSLTRASKRKLEELLQQWSEWHVQRGSSSQDLNEVLESGEETYFPALCVGTEKSSAVSFWIENQTKKQLNNDLISSDSDSVPLYDRGFAIGLTSTDGPSNVEGGLEIVNEAARCFNCGSYSHA 389
BLAST of GT621165 vs. TrEMBL
Match: D7SMR7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_83.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036455001 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.323e-47 Identity = 117/280 (41.79%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 46 PLEFHSLCSSLGN*VYVKMDMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKP-------VQSEQECDNNSLKEKKDLQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR---GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 P S+C S N ++++ G +DS N+ VK +++ +N+++ EK V +++ + L + +++ + T+ + S GV E ++ D+ P G+ I GVKRAR+T+D+ QPSVHVIY SLTR SK+KLEELLQQWS WHAK+VSSS+D L+S EKT+FPA+ VG +S+VSFW++NQT + + +D +SVPLYDRG+ALGL S DG S +G LEIID SRCFNCGSY+H+ Sbjct: 600 PAPSGSVCGSEDN------ELHNSNPEPGEADSSSSNSEVKEDKLNIESLMQNKVDFEKVDSRLTPGVVLDKDLVDKQLTSQGSVEVTETIVVTKLINSSSSGV-----PTENGCLTAPDEGPIGNHMIDGTSISGVKRARLTIDEQ--QPSVHVIYNSLTRDSKRKLEELLQQWSEWHAKYVSSSHDPKGQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRKQQDKEFISLDGDSVPLYDRGFALGLVSEDGQSKPEGALEIIDA-SRCFNCGSYNHS 865
BLAST of GT621165 vs. TrEMBL
Match: B9H3R3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_759262 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.238e-45 Identity = 112/257 (43.58%), Postives = 151/257 (58.75%), Query Frame = 1 Query: 121 SSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKVD--------LEFTETVVKSEEGVRETVHAAETVGVSLKDQ---SPNGS-VEIGRRGVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 S +G+SDS + S + E D D+E+ E V +++ N E + + D +E E V + EG + VGV D+ P S ++ GVKR R+T N QPSVHV+Y SLTRASKKKLEELLQQWS WHA+ SSS+D E+L+S E T+FPA+ +G +S+V+FW+ENQT + + P+ N VPLYDRGYALGL SADG N + GLEI+ +RC+NC SY+H+ Sbjct: 11 SDLGLSDSHSQLGSNETKESKD--DEESVELNEGAVGNDERMKNGESVELNEGAVGNDERMKNGESVELNEGAVGNNEGTKNGEGFELNVGVIGNDEVTVDPGYSALKANVSGVKRKRITY--NEEQPSVHVMYNSLTRASKKKLEELLQQWSEWHAQQNSSSHDSDEMLQSGEDTYFPALRIGMVKSSAVTFWIENQTRKQQDNAIIPLQSNYVPLYDRGYALGLTSADGPINIERGLEIVGDAARCYNCASYNHS 263
BLAST of GT621165 vs. TrEMBL
Match: B9N1Z8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_266119 PE=4 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 8.307e-42 Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 421 GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 GVKR R+ D+ QPSVHV+Y SLTR+ K+KLEELLQQWS WHA+ +SS+D +E+L+S E T+FPA+ VG E +S+VSFW+ENQ + D+ N VPLYDRGY LGL SADG N +GGLEI+D +RCFNCG+Y+H+ Sbjct: 2 GVKRKRMAYDEQ--QPSVHVMYNSLTRSGKQKLEELLQQWSEWHAQQ-NSSHDSNEMLQSGEDTYFPALRVGMEKSSAVSFWIENQARKQQDNDLILQHSNFVPLYDRGYVLGLTSADGPINVEGGLEIVDAAARCFNCGAYNHS 143
BLAST of GT621165 vs. TrEMBL
Match: Q93YW4_ARATH (Putative uncharacterized protein At5g38600 OS=Arabidopsis thaliana GN=At5g38600 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 3.157e-41 Identity = 105/259 (40.54%), Postives = 153/259 (59.07%), Query Frame = 1 Query: 103 DMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKV------DLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEII-DVPSRCFNCGSYSHA 855 D+ D+P+S SEV+ NS+++ S EA V +++ N + + L++ TE V E+V E +G+ + + ++++ + GVKR R + D+ QP+VHV YK LTRASK+KLE LLQ+WS W A++ S + D ++ ES E+T FPA+ VG + TSSVSFW++NQT + D ++ ++ PLYDR +A+GLNSADGS N +GGLEII D P RCFNCG YSH+ Sbjct: 5 DVLDIPASSNFG-SEVKKNSLESGNGSP--------EANSLVGNDENVKGNLDLDLTEENLRIVGGQESGEILTEQVSDVFNASVESVAVDEKLGIQKETLVHSTTLDVSSKAGVKRPRTSYDEQ--QPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTSLAQDQEQLFESGEETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRKFAIGLNSADGSRNVEGGLEIIDDDPPRCFNCGGYSHS 252
BLAST of GT621165 vs. TrEMBL
Match: D7KV08_ARALY (Proline-rich spliceosome-associated family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475818 PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.490e-40 Identity = 93/204 (45.59%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEG----------VRETVHAA-ETVGVSLKDQSPNGSVEIGRRGVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G VR+ V+ + ETV V + +S GVKR R + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLES ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+SA GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGEASIVEVRDAVNVSVETVKVDVSSKS----------GVKRPRTISLEQ--QPSVHVTYKHLTRNSKQKLESLLQQWSEWEAEQNSFSEDQEQVLESGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDSAGGSNNMEGGLEIIDDPPRCFNCGAYSHS 209
BLAST of GT621165 vs. TrEMBL
Match: D7MJW9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494108 PE=4 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 8.597e-39 Identity = 102/244 (41.80%), Postives = 140/244 (57.38%), Query Frame = 1 Query: 172 MEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKVDLEFTE----TVVKSEEG----------VRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLE-IIDVPSRCFNCGSYSHA 855 ME D +D LE+ N K +L ++ DL+ TE TV E G +V E VG+ + ++++ + GVKR R + D+ Q +VHV YK LTRASK+KLE LL+QWS W A++ S D + LES E+T+FPA+ VG + TSSVSFW++NQT + ++ ++ PLYDR +A+GLNSADGS N +GGLE I D P RCFNCG+YSH+ Sbjct: 1 MEAEDVLD----LESGNGSPEANSLVGNDENMKGNLDVEKDLDLTEENLRTVGGGESGEILTEQVSDVFNASVAVDEKVGIQKETLVHRTTLDVSSKAGVKRPRTSFDEQ--QSTVHVTYKDLTRASKQKLESLLRQWSEWEAENTSLVQDQVQPLESGEETYFPALRVGLQKTSSVSFWIDNQTGPKPLEEFVLVESSTTPLYDRKFAIGLNSADGSRNLEGGLENIDDDPPRCFNCGAYSHS 238
BLAST of GT621165 vs. TrEMBL
Match: Q8LD15_ARATH (At1g67210 OS=Arabidopsis thaliana GN=At1g67210 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G + VG ++ + V++ + GVKRAR + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLE+ ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+S GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207
BLAST of GT621165 vs. TrEMBL
Match: Q3ECG9_ARATH (Putative uncharacterized protein At1g67210.2 OS=Arabidopsis thaliana GN=At1g67210 PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G + VG ++ + V++ + GVKRAR + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLE+ ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+S GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207
BLAST of GT621165 vs. TrEMBL
Match: A0MEE9_ARATH (Putative uncharacterized protein (Fragment) OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.466e-38 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G + VG ++ + V++ + GVKRAR + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLE+ ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+S GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207
BLAST of GT621165 vs. TAIR peptide
Match: AT5G38600.1 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr5:15457386-15460466 FORWARD LENGTH=532) HSP 1 Score: 172.94 bits (437), Expect = 1.975e-43 Identity = 105/259 (40.54%), Postives = 153/259 (59.07%), Query Frame = 1 Query: 103 DMNDVPSSVGISDSEVENNSVKNMEISDSVDQENELEAEKPVQSEQECDNNSLKEKKDLQLKV------DLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEII-DVPSRCFNCGSYSHA 855 D+ D+P+S SEV+ NS+++ S EA V +++ N + + L++ TE V E+V E +G+ + + ++++ + GVKR R + D+ QP+VHV YK LTRASK+KLE LLQ+WS W A++ S + D ++ ES E+T FPA+ VG + TSSVSFW++NQT + D ++ ++ PLYDR +A+GLNSADGS N +GGLEII D P RCFNCG YSH+ Sbjct: 5 DVLDIPASSNFG-SEVKKNSLESGNGSP--------EANSLVGNDENVKGNLDLDLTEENLRIVGGQESGEILTEQVSDVFNASVESVAVDEKLGIQKETLVHSTTLDVSSKAGVKRPRTSYDEQ--QPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTSLAQDQEQLFESGEETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRKFAIGLNSADGSRNVEGGLEIIDDDPPRCFNCGGYSHS 252
BLAST of GT621165 vs. TAIR peptide
Match: AT1G67210.2 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr1:25141339-25143774 FORWARD LENGTH=403) HSP 1 Score: 164.081 bits (414), Expect = 9.175e-41 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G + VG ++ + V++ + GVKRAR + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLE+ ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+S GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207
BLAST of GT621165 vs. TAIR peptide
Match: AT1G67210.1 (| Symbols: | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein | chr1:25141339-25143774 FORWARD LENGTH=405) HSP 1 Score: 164.081 bits (414), Expect = 9.175e-41 Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 277 LQLKVDLEFTETVVKSEEGVRETVHAAETVGVSLKDQSPNGSVEIGRR-GVKRARVTVDDNGHQPSVHVIYKSLTRASKKKLEELLQQWSHWHAKHVSSSNDLSEVLESSEKTFFPAVCVGHESTSSVSFWMENQTMNGINTDVSPIDDNSVPLYDRGYALGLNSADGSSNADGGLEIIDVPSRCFNCGSYSHA 855 + ++ D++ TE ++ G + VG ++ + V++ + GVKRAR + QPSVHV YK LTR SK+KLE LLQQWS W A+ S S D +VLE+ ++T+FPA+ VG + TSSVSFW + QT + + P++ ++ PLY+RG+ +GL+S GS+N +GGLEIID P RCFNCG+YSH+ Sbjct: 18 IDMEEDMDLTEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQ--QPSVHVTYKHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFWFDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAYSHS 207 The following BLAST results are available for this feature:
BLAST of GT621165 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT621165 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT621165 ID=GT621165; Name=GT621165; organism=Lens culinaris; type=EST; length=855bpback to top |