GT622050
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT622050 vs. TrEMBL
Match: B9RNK3_RICCO (Pyruvate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1339660 PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.446e-40 Identity = 84/106 (79.25%), Postives = 86/106 (81.13%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRDPAEKAHYA+RDPI +LKKYII N LASE ELK IEKKID SPVP RSQLLENVFADPKGFGI PDG YRCEDPKFTQGTAHV Sbjct: 328 RGHSLADPDELRDPAEKAHYAARDPITSLKKYIIENSLASEAELKAIEKKIDEVVEDSVEFADESPVPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTQGTAHV 433
BLAST of GT622050 vs. TrEMBL
Match: D7U830_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027439001 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.194e-40 Identity = 83/106 (78.30%), Postives = 86/106 (81.13%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRDPAEKAHYA+RDP+ ALKKYI NKLASE ELK IEKKID SP P RSQLLENVFADPKGFGI PDGSYRCEDPKFT+GTAHV Sbjct: 328 RGHSLADPDELRDPAEKAHYAARDPLTALKKYIFDNKLASEAELKAIEKKIDEVVEESVEFADASPPPPRSQLLENVFADPKGFGIGPDGSYRCEDPKFTEGTAHV 433
BLAST of GT622050 vs. TrEMBL
Match: B9GRR1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_755473 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.660e-38 Identity = 81/106 (76.42%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRDPAEKA YA+RDPIAALKKY+I N LASE ELK IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFT+GTA V Sbjct: 250 RGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAIEKKIDEVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 355
BLAST of GT622050 vs. TrEMBL
Match: A9PF50_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.660e-38 Identity = 81/106 (76.42%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRDPAEKA YA+RDPIAALKKY+I N LASE ELK IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFT+GTA V Sbjct: 337 RGHSLADPDELRDPAEKARYAARDPIAALKKYMIENSLASEAELKAIEKKIDEVVEEAVEFADESPHPSRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTARV 442
BLAST of GT622050 vs. TrEMBL
Match: O24457_ARATH (At1g01090/T25K16_8 OS=Arabidopsis thaliana GN=At1g01090 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.938e-37 Identity = 80/106 (75.47%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRD AEKA YA+RDPIAALKKY+I NKLA E ELK+IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFT+GTA V Sbjct: 323 RGHSLADPDELRDAAEKAKYAARDPIAALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAQV 428
BLAST of GT622050 vs. TrEMBL
Match: D7KQB5_ARALY (PDH-E1 alpha OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470171 PE=4 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.638e-37 Identity = 79/106 (74.53%), Postives = 83/106 (78.30%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRD AEKA YA+RDPI ALKKY+I NKLA E ELK+IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFT+GTA V Sbjct: 327 RGHSLADPDELRDAAEKAKYAARDPIVALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAQV 432
BLAST of GT622050 vs. TrEMBL
Match: A9TTX3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225446 PE=4 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.638e-37 Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELR+PAEKAHYA+RDPI ALKKY++ N++A+E ELK IEKKID SP+P RSQLLENVFADPKGFGI PDG YRCEDP FT GTA V Sbjct: 336 RGHSLADPDELREPAEKAHYAARDPIVALKKYLLENEIATEAELKTIEKKIDEVVEDAVEFADASPLPERSQLLENVFADPKGFGIGPDGRYRCEDPGFTAGTAQV 441
BLAST of GT622050 vs. TrEMBL
Match: A9TBP7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220786 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.640e-36 Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELR PAEKAHYA+RDPI ALKKY++ N++A+E ELK+IEKKID SP+P RSQLLENVFADPKGFGI PDG YRCEDP FT GTA V Sbjct: 335 RGHSLADPDELRAPAEKAHYAARDPIVALKKYLLDNEIATEAELKSIEKKIDEVVEDAVEFADASPLPGRSQLLENVFADPKGFGIGPDGRYRCEDPGFTAGTAQV 440
BLAST of GT622050 vs. TrEMBL
Match: C5YBS3_SORBI (Putative uncharacterized protein Sb06g001120 OS=Sorghum bicolor GN=Sb06g001120 PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.798e-36 Identity = 78/106 (73.58%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELR P EK HYA+RDPI ALKKYII LA+E ELK+IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFTQGTA V Sbjct: 326 RGHSLADPDELRKPDEKTHYAARDPITALKKYIIEENLATESELKSIEKKIDDVVEEAVEFADASPHPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAQV 431
BLAST of GT622050 vs. TrEMBL
Match: B8LRC3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.773e-36 Identity = 75/106 (70.75%), Postives = 83/106 (78.30%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELR+PAEKAHYA+RDPI +LKKY+I N LA+E +LK+IEKKID SP+P R QLLENVFADPKGFGI PDG YRCEDP FT GTA V Sbjct: 333 RGHSLADPDELRNPAEKAHYAARDPIVSLKKYLIENNLANESDLKSIEKKIDEIIEEAVEFADASPLPQRGQLLENVFADPKGFGIGPDGRYRCEDPGFTAGTAQV 438
BLAST of GT622050 vs. SwissProt
Match: ODPA_PORPU (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra purpurea GN=pdhA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.298e-11 Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFAD 242 RGHSLADPDELR EK + +RDPI LKK+I+ N++AS EL +I+ + SP P+ S+L +FAD Sbjct: 264 RGHSLADPDELRSRQEKEAWVARDPIKKLKKHILDNQIASSDELNDIQSSVKIDLEQSVEFAMSSPEPNISELKRYLFAD 343
BLAST of GT622050 vs. SwissProt
Match: ODPA_PORYE (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.002e-11 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFAD 242 RGHSLADPDELR EK + +RDPI LKKYI+ N++A+ EL I+ + SP P+ S+L +FAD Sbjct: 266 RGHSLADPDELRSRQEKEAWVARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKFAISSPEPNMSELKRYLFAD 345
BLAST of GT622050 vs. SwissProt
Match: ODPA_RICFE (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia felis GN=pdhA PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 6.920e-8 Identity = 27/78 (34.62%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVF 236 RGHS++DP + R E Y RDP+ ++K I+ NK A+E +LK IE+ + SP+P +L V+ Sbjct: 248 RGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYATEADLKEIEQSVKEIVKEAVKFSENSPLPDEGELYTEVY 325
BLAST of GT622050 vs. SwissProt
Match: ODPA_RICBR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia bellii (strain RML369-C) GN=pdhA PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 9.037e-8 Identity = 27/78 (34.62%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVF 236 RGHS++DP + R E Y RDPI ++K I+ N ASE +LK IE+ + SP+P+ +L ++ Sbjct: 248 RGHSMSDPAKYRSKEEVETYKERDPITEIRKIILENNYASEADLKEIEQSVKEIVKEAVEFSENSPLPNEEELYTQIY 325
BLAST of GT622050 vs. SwissProt
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 3.434e-7 Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVF 236 RGHS++DP + R E Y RDP+ ++K I+ NK +E +LK IE+ + SP+P +L V+ Sbjct: 248 RGHSMSDPAKYRSKEEVEQYKERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFSENSPLPDEGELYTQVY 325
BLAST of GT622050 vs. SwissProt
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 7.651e-7 Identity = 25/78 (32.05%), Postives = 42/78 (53.85%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVF 236 RGHS++DP + R E A Y RD + +++ I+ NK A+E +LK IE+ + SP+P +L +++ Sbjct: 248 RGHSMSDPAKYRSKEEVAKYKERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPLPSEDELYTDIY 325
BLAST of GT622050 vs. TAIR peptide
Match: AT1G01090.1 (| Symbols: PDH-E1 ALPHA | pyruvate dehydrogenase E1 alpha | chr1:47705-49166 REVERSE LENGTH=428) HSP 1 Score: 159.844 bits (403), Expect = 1.311e-39 Identity = 80/106 (75.47%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 RGHSLADPDELRDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCEDPKFTQGTAHV 320 RGHSLADPDELRD AEKA YA+RDPIAALKKY+I NKLA E ELK+IEKKID SP P RSQLLENVFADPKGFGI PDG YRCEDPKFT+GTA V Sbjct: 323 RGHSLADPDELRDAAEKAKYAARDPIAALKKYLIENKLAKEAELKSIEKKIDELVEEAVEFADASPQPGRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAQV 428
BLAST of GT622050 vs. TAIR peptide
Match: AT1G59900.1 (| Symbols: AT-E1 ALPHA, E1 ALPHA | pyruvate dehydrogenase complex E1 alpha subunit | chr1:22051368-22053660 FORWARD LENGTH=389) HSP 1 Score: 52.373 bits (124), Expect = 2.947e-7 Identity = 35/97 (36.08%), Postives = 48/97 (49.48%), Query Frame = 3 Query: 6 GHSLADPDEL---RDPAEKAHYASRDPIAALKKYIIGNKLASELELKNIEKKIDXXXXXXXXXXXXSPVPHRSQLLENVFADPKGFGIAPDGSYRCE 287 GHS++DP RD RDPI +KK ++ + LA+E ELK++EK+I P+P S+L NV+ KGFG G R E Sbjct: 290 GHSMSDPGSTYRTRDEISGVRQ-ERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKDCPMPEPSELFTNVYV--KGFGTESFGPDRKE 383 The following BLAST results are available for this feature:
BLAST of GT622050 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT622050 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 6
BLAST of GT622050 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT622050 ID=GT622050; Name=GT622050; organism=Lens culinaris; type=EST; length=715bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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