GT622069

EST Overview


Name	GT622069
Unique Name	GT622069
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	780

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT622069 vs. TrEMBL
Match: C6TNI1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 3.406e-89
Identity = 166/226 (73.45%), Postives = 189/226 (83.63%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRSSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            MPSAQDPFYVVK EIQES+D L+S+F QW+ ++D  ER  + KEVLA CESI WQVDEL+KAI+VA+++PSWYGID+VE+ENRR+WTS ARTQV   K+TV+AGK SN  S++GMHRELMRLP S+QT TSN  AA DNDDFIESESDRQMLLIK+QD+ELDELSLSVQRIGGVGLTIHEEL+AQEKIIDELGNEMD TSNRLDFVQ             GQIMMI
Sbjct:    1 MPSAQDPFYVVKQEIQESIDKLKSTFHQWENTADVGERSSLSKEVLASCESIAWQVDELDKAISVAARDPSWYGIDEVEVENRRKWTSDARTQVNKAKRTVEAGKGSNNASLSGMHRELMRLPSSHQT-TSNQYAAQDNDDFIESESDRQMLLIKRQDEELDELSLSVQRIGGVGLTIHEELLAQEKIIDELGNEMDGTSNRLDFVQKKVAMVMKKASAKGQIMMI 225

[Close]

BLAST of GT622069 vs. TrEMBL
Match: C6TJZ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 5.438e-87
Identity = 163/229 (71.18%), Postives = 193/229 (84.28%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRSSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTT---SINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            MPSAQDPFYVVK+EIQ+S+D LQS+F QW+  S AAE+G + KEVLAGCESIEWQVDEL+KAIAVAS++PSWYGID+ E+E+RRRW SSAR+QV TMKK +++GK S+TT   S+NGM RELMRLP+S+QT +SN  AA DNDDFI+SESDRQ LLIK+QD+ELDELS SV+RIGGVGLTIH+EL AQEKI+DELG+EMDST+NRLDFVQ             GQIMMI
Sbjct:    1 MPSAQDPFYVVKAEIQDSIDKLQSTFHQWESKSGAAEQGHLTKEVLAGCESIEWQVDELDKAIAVASRDPSWYGIDEAEVESRRRWASSARSQVGTMKKAMESGKGSSTTSHASVNGMRRELMRLPNSHQTDSSNQYAARDNDDFIQSESDRQTLLIKRQDEELDELSESVRRIGGVGLTIHDELTAQEKILDELGSEMDSTTNRLDFVQKKVAMVMKKASAKGQIMMI 229

[Close]

BLAST of GT622069 vs. TrEMBL
Match: B9H2P0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817835 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.890e-80
Identity = 157/230 (68.26%), Postives = 183/230 (79.57%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKR-SSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSN---TTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQES+D LQSSF QW+R SSD+ E+ R+ KE+LA CESIEWQVDEL+KAI+VA+++PSWYGID+ E+E RRRWTS+ARTQV  +KK V AGK  N   T S+NGM RELMR+PD+ QT  SN     DNDDFI+SESDRQMLLIKQQDDELDELS SV+RIGGVGLTIHEEL+AQE+II +L  EMD+TSNRLDFVQ             GQ+MMI
Sbjct:    1 MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESIEWQVDELDKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSGTASVNGMRRELMRMPDAQQTDKSNQYT-QDNDDFIQSESDRQMLLIKQQDDELDELSASVERIGGVGLTIHEELLAQERIIGDLDTEMDTTSNRLDFVQKKVAMVMKKASAKGQLMMI 229

[Close]

BLAST of GT622069 vs. TrEMBL
Match: D7T2H2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038187001 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.319e-76
Identity = 146/230 (63.48%), Postives = 179/230 (77.83%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRSS-DAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSN---TTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQES+D L S+F QW+R   +  E+  + KE+LA CESIEWQVDEL+K I+VA+K+P+WYGID+VE++ RRRWTS+A TQV  +KK+V AGK SN   T ++NGM RE+MR+ + +Q   SN   + DNDDFI SESDRQ+LLI++QD+ELD LS SV+RIGGVGLTIHEEL+AQEKIIDELG+EMDSTSNRLDFVQ             GQIMMI
Sbjct:   55 MSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQVDELDKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTGTANVNGMRREMMRMSNPHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSASVERIGGVGLTIHEELLAQEKIIDELGSEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMI 284

[Close]

BLAST of GT622069 vs. TrEMBL
Match: A5BHU9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034578 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.319e-76
Identity = 146/230 (63.48%), Postives = 179/230 (77.83%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRSS-DAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSN---TTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQES+D L S+F QW+R   +  E+  + KE+LA CESIEWQVDEL+K I+VA+K+P+WYGID+VE++ RRRWTS+A TQV  +KK+V AGK SN   T ++NGM RE+MR+ + +Q   SN   + DNDDFI SESDRQ+LLI++QD+ELD LS SV+RIGGVGLTIHEEL+AQEKIIDELG+EMDSTSNRLDFVQ             GQIMMI
Sbjct:    1 MSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESIEWQVDELDKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTGTANVNGMRREMMRMSNPHQADRSNQYGSQDNDDFISSESDRQLLLIRRQDEELDVLSASVERIGGVGLTIHEELLAQEKIIDELGSEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMI 230

[Close]

BLAST of GT622069 vs. TrEMBL
Match: B9N9L0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_586061 PE=4 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 5.641e-76
Identity = 148/230 (64.35%), Postives = 178/230 (77.39%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKR-SSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSN---TTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQES+D LQSSF QW+R S D  ++  + K++LA CESIEWQVDEL+KAI+VA ++PSWYGID+ E+E RRRWTS+AR QV  +KK V AG+  N   T S++GM RELMR+P+S Q   SN     DNDDFI+SESDRQ+LLIKQQD+ELDELS+++ R GGVGLTIHEEL+AQEKIID+LG EMDSTSNRLDFVQ             GQ+MMI
Sbjct:    1 MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISCDMGDQVHLTKDLLAACESIEWQVDELDKAISVAGRDPSWYGIDEAELEKRRRWTSTARNQVGNVKKAVVAGREVNISGTASVSGMRRELMRMPNSQQADKSNQYT-QDNDDFIQSESDRQLLLIKQQDEELDELSITIGRFGGVGLTIHEELLAQEKIIDDLGMEMDSTSNRLDFVQKKVAMVMKKASAKGQLMMI 229

[Close]

BLAST of GT622069 vs. TrEMBL
Match: D7KCX3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473066 PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 2.076e-70
Identity = 140/228 (61.40%), Postives = 171/228 (75.00%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKR-SSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGK-SSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQ+S+D LQS+F +W+R S D  ++  V KE++A C SIEWQVDELEKAI VA+K+PSWYGID+ E+E RRRWTS+ARTQV  +K  V AGK SS     + + RELMR+P+S +    +     D+D F++SESDRQMLLIKQQD+ELDELS SVQRIGGVGLTIH+EL+AQE+IIDEL  EMDST NRL+FVQ             GQ+MMI
Sbjct:    1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMI 228

[Close]

BLAST of GT622069 vs. TrEMBL
Match: C5XIP8_SORBI (Putative uncharacterized protein Sb03g046820 OS=Sorghum bicolor GN=Sb03g046820 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.103e-63
Identity = 128/228 (56.14%), Postives = 166/228 (72.81%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRS-SDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQ-THTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+V+ EIQ+S+D LQS+F +W+++ S+  E   + KE+L  CESIEWQVDELEK I+VAS++P++YG+D+VE+  RR WT SAR QV T+K+ ++ GKS+  TS              YQ T  +NH +A DNDDFI SESDRQ+LL++QQD+ELDELS SVQRIGGVGLTIHEEL  QE+I+++L  EM++TSNRLDFVQ             GQIM+I
Sbjct:    1 MSSAQDPFYIVREEIQDSIDKLQSTFHRWEQTASNTGEYVHLTKELLTSCESIEWQVDELEKTISVASRDPAYYGLDEVELSRRRNWTGSARKQVGTVKRAIEKGKSNAATS-------------KYQDTSRTNHYSAQDNDDFISSESDRQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQERILNDLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLI 215

[Close]

BLAST of GT622069 vs. TrEMBL
Match: B4FXY3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.103e-63
Identity = 129/228 (56.58%), Postives = 165/228 (72.37%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRS-SDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQ-THTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+V+ EIQES+D LQS+F +W+++ S+  E   + KE+L  CESIEWQVDELEK I+VAS++PS+YG+D+VE+  RR WT SA  QV T+K+ ++ GKS+  TS              YQ T  +NH +A DNDDFI SESDRQ+LL++QQD+ELDELS SVQRIGGVGLTIHEEL  QE+I+++L  EM++TSNRLDFVQ             GQIM+I
Sbjct:    1 MSSAQDPFYIVREEIQESIDKLQSNFHRWEQTASNTGEYVHLTKELLTSCESIEWQVDELEKTISVASRDPSYYGLDEVELSRRRNWTGSAHKQVGTVKRAIEKGKSNVATS-------------KYQDTSRTNHYSAQDNDDFISSESDRQLLLMRQQDEELDELSESVQRIGGVGLTIHEELSGQERILNDLSLEMETTSNRLDFVQKRVAMVMKKAGIKGQIMLI 215

[Close]

BLAST of GT622069 vs. TrEMBL
Match: B9S934_RICCO (Syntaxin, putative OS=Ricinus communis GN=RCOM_1012060 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 2.458e-63
Identity = 125/189 (66.14%), Postives = 153/189 (80.95%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRS-SDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSN---TTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQ 560
            M SAQDPFY+VK EIQES+D L S+F QW+R  SD  E+  + KE+LA CESIEWQVDEL+KAI VA+++PSWYGID+ E+E RRRWT++AR QV  +KK +  GK +N   TTS+NGM REL+RL +++QT  SN     DNDDFI+SESDRQ+LLIKQQD+ELDELS SV+RIGGVGLTIHEEL+AQ
Sbjct:    1 MSSAQDPFYIVKEEIQESIDKLLSTFHQWERIFSDPEEQMHLTKELLASCESIEWQVDELDKAIGVAARDPSWYGIDEGELEKRRRWTNTARVQVGNVKKAIKTGKEANSNGTTSVNGMRRELLRLQNTHQTDKSN-PYTQDNDDFIQSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQ 188

[Close]

BLAST of GT622069 vs. SwissProt
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.351e-71
Identity = 140/228 (61.40%), Postives = 171/228 (75.00%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKR-SSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGK-SSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQ+S+D LQS+F +W+R S D  ++  V KE++A C SIEWQVDELEKAI VA+K+PSWYGID+ E+E RRRWTS+ARTQV  +K  V AGK SS     + + RELMR+P+S +    +     D+D F++SESDRQMLLIKQQD+ELDELS SVQRIGGVGLTIH+EL+AQE+IIDEL  EMDST NRL+FVQ             GQ+MMI
Sbjct:    1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMI 228

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX6_MOUSE (Syntaxin-6 OS=Mus musculus GN=Stx6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.016e-18
Identity = 62/219 (28.31%), Postives = 111/219 (50.68%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQWK---RSSDAAERGRVK---KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTS---------NHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VVK E+Q++V+  Q  F +W    +   AA R  +     E+     SIEW +++L++ I++    P  + +D  E+  R+ + +S R  V  MK  + A  SS        +R+ +    S Q+  +         +      N  FIE +  +Q L+++QQD++L+ +S S+  +  +   I  EL  Q  ++D+  +E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSA--SSVQALAERKNRQALLGDSSSQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNV 218

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX6_CHICK (Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.016e-18
Identity = 62/218 (28.44%), Postives = 111/218 (50.92%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQWK---RSSDAAERGRVK---KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTSNHNAAND--------NDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VVK E+Q++V+  Q  F +W    +    A R  +     E+     SIEW +++L++ I++    P  + +D  E+  R+ + +S R  V  MK  +    SS        +R+ +    S Q+ +S  +  +         N  FIE +  +Q L+++QQD++L+ +S S+  +  +   I  EL  Q  ++D+  +E+DST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSIATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELGIRKSFITSTRQVVREMKDQMS--NSSMQALAERKNRQALLGESSSQSWSSGPDKYSRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNV 217

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX6_RAT (Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.733e-18
Identity = 62/219 (28.31%), Postives = 110/219 (50.23%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQWK---RSSDAAERGRVK---KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTS---------NHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VVK E+Q++V+  Q  F +W    +   AA R  +     E+     SIEW +++L++ I++    P  + +D  E+  R+ + +S R  V  MK  + A  SS        +R+ +    S Q   +         +      N  FIE +  +Q L+++QQD++L+ +S S+  +  +   I  EL  Q  ++D+  +E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSA--SSVQALAERKNRQALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNV 218

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX6_PONAB (Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.733e-18
Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQWK---RSSDAAERGRVK---KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDS----YQTHTSNHNAAND------NDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VVK E+Q++V+  Q  F +W    +    A R  +     E+     SIEW +++L++ I++    P  + +D  E+  R+ + +S R  V  MK   D   +S+  ++         L DS    + T T++     D      N  FIE +  +Q L+++QQD++L+ +S S+  +  +   I  EL  Q  ++++  +E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMK---DQMSTSSVQALAERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNV 218

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX6_HUMAN (Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.733e-18
Identity = 62/220 (28.18%), Postives = 112/220 (50.91%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQWK---RSSDAAERGRVK---KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDS----YQTHTSNHNAAND------NDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VVK E+Q++V+  Q  F +W    +    A R  +     E+     SIEW +++L++ I++    P  + +D  E+  R+ + +S R  V  MK   D   +S+  ++         L DS    + T T++     D      N  FIE +  +Q L+++QQD++L+ +S S+  +  +   I  EL  Q  ++++  +E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMK---DQMSTSSVQALAERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNV 218

[Close]

BLAST of GT622069 vs. SwissProt
Match: STX10_HUMAN (Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.793e-15
Identity = 56/213 (26.29%), Postives = 109/213 (51.17%), Query Frame = 3

Query:   12 SAQDPFYVVKSEIQESVDNLQSSFDQW-KRSSDAAERGRVK-----KEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTSN---HNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFV 623
            S +DPF+VV+ E+Q++V+  +  + +W +   ++A  GR +      E+  G  SIEW +++LE+ I +    P  + +   +++ R+ +    R  V  MK  + +  +      N  +RE++    + Q   S+    +A +    +IE +   Q L++ +QD +L+ +S S+Q +  +   + EEL  Q  ++D    EMD T +R+D V
Sbjct:    2 SLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTAVAFLERN--NREILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGV 212

[Close]

BLAST of GT622069 vs. SwissProt
Match: TLG1_SCHPO (t-SNARE affecting a late Golgi compartment protein 1 OS=Schizosaccharomyces pombe GN=tlg1 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.297e-9
Identity = 43/202 (21.29%), Postives = 99/202 (49.01%), Query Frame = 3

Query:   18 QDPFYVVKSEIQESVDNLQSSFDQWKRSSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTSNHNAA---NDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRL 614
            +DPFY VK++    ++ ++  ++ +  + ++        E+    + +   + +L+ A+ +A K    +G+D+ E+++RRR+ S    ++  ++  + A  S+               P S + +T ++ A+   ++ D  +  +   Q  L +QQD  LD +  ++  I G    + EEL  Q  ++D L N +++T+++L
Sbjct:    2 EDPFYEVKADASNQMEQVRKLYNSFMAARNSGVLSP-NTELTYAIDELSETLKDLKAAVEIAMKNSEHFGLDEEELKSRRRFVSELDIELNNIQLKMGAAPST---------------PVSTEPYTVDNGASAGLSEEDHAVNRQYQEQ--LYQQQDVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKL 185

[Close]

BLAST of GT622069 vs. SwissProt
Match: TLG1_YEAST (T-SNARE affecting a late Golgi compartment protein 1 OS=Saccharomyces cerevisiae GN=TLG1 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.229e-7
Identity = 45/203 (22.17%), Postives = 96/203 (47.29%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKRSSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGKSSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRL 614
            M +++DPF  V  + +E ++ + +   +   + D  +    ++E+    + +E  + +L+++I V  ++ +    +DV         S    QV  +K+ +DA K      I    +  + L ++ +  T N + A +ND  + +    QML  ++QD  LD +  ++Q +     T+ +EL  Q +++D +   MD   N+L
Sbjct:    1 MNNSEDPFQQVVKDTKEQLNRINNYITRHNTAGDDDQ----EEEIQDILKDVEETIVDLDRSIIVMKRDEN----EDV---------SGREAQVKNIKQQLDALKLRFDRRIQESTQTTIPLEETVENSTLNTSMAENNDGGMSNPFQEQML--REQDVHLDGIHKTMQNLHIQAQTMGDELENQGQLLDNMDEGMDGVVNKL 184

[Close]

BLAST of GT622069 vs. TAIR peptide
Match: AT1G28490.1 (| Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61 | chr1:10016433-10017842 FORWARD LENGTH=245)

HSP 1 Score: 269.626 bits (688), Expect = 1.346e-72
Identity = 140/228 (61.40%), Postives = 171/228 (75.00%), Query Frame = 3

Query:    6 MPSAQDPFYVVKSEIQESVDNLQSSFDQWKR-SSDAAERGRVKKEVLAGCESIEWQVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGK-SSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            M SAQDPFY+VK EIQ+S+D LQS+F +W+R S D  ++  V KE++A C SIEWQVDELEKAI VA+K+PSWYGID+ E+E RRRWTS+ARTQV  +K  V AGK SS     + + RELMR+P+S +    +     D+D F++SESDRQMLLIKQQD+ELDELS SVQRIGGVGLTIH+EL+AQE+IIDEL  EMDST NRL+FVQ             GQ+MMI
Sbjct:    1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMI 228

[Close]

BLAST of GT622069 vs. TAIR peptide
Match: AT1G28490.2 (| Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61 | chr1:10016634-10017842 FORWARD LENGTH=206)

HSP 1 Score: 203.371 bits (516), Expect = 1.185e-52
Identity = 107/173 (61.85%), Postives = 129/173 (74.57%), Query Frame = 3

Query:  168 QVDELEKAIAVASKEPSWYGIDDVEIENRRRWTSSARTQVLTMKKTVDAGK-SSNTTSINGMHRELMRLPDSYQTHTSNHNAANDNDDFIESESDRQMLLIKQQDDELDELSLSVQRIGGVGLTIHEELMAQEKIIDELGNEMDSTSNRLDFVQXXXXXXXXXXXXXGQIMMI 683
            +VDELEKAI VA+K+PSWYGID+ E+E RRRWTS+ARTQV  +K  V AGK SS     + + RELMR+P+S +    +     D+D F++SESDRQMLLIKQQD+ELDELS SVQRIGGVGLTIH+EL+AQE+IIDEL  EMDST NRL+FVQ             GQ+MMI
Sbjct:   17 KVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMI 189

The following BLAST results are available for this feature:

BLAST of GT622069 vs. TrEMBL
BLAST of GT622069 vs. SwissProt
BLAST of GT622069 vs. TAIR peptide

BLAST of GT622069 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TNI1_SOYBN	3.406e-89	73.45	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TJZ6_SOYBN	5.438e-87	71.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9H2P0_POPTR	2.890e-80	68.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T2H2_VITVI	4.319e-76	63.48	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BHU9_VITVI	4.319e-76	63.48	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9N9L0_POPTR	5.641e-76	64.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KCX3_ARALY	2.076e-70	61.40	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C5XIP8_SORBI	1.103e-63	56.14	Putative uncharacterized protein Sb03g046820 OS=So...	[more]
B4FXY3_MAIZE	1.103e-63	56.58	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B9S934_RICCO	2.458e-63	66.14	Syntaxin, putative OS=Ricinus communis GN=RCOM_101...	[more]

BLAST of GT622069 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
SYP61_ARATH	1.351e-71	61.40	Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 ...	[more]
STX6_MOUSE	1.016e-18	28.31	Syntaxin-6 OS=Mus musculus GN=Stx6 PE=2 SV=1	[more]
STX6_CHICK	1.016e-18	28.44	Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1	[more]
STX6_RAT	1.733e-18	28.31	Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1	[more]
STX6_PONAB	1.733e-18	28.18	Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1	[more]
STX6_HUMAN	1.733e-18	28.18	Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1	[more]
STX10_HUMAN	1.793e-15	26.29	Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1	[more]
TLG1_SCHPO	7.297e-9	21.29	t-SNARE affecting a late Golgi compartment protein...	[more]
TLG1_YEAST	5.229e-7	22.17	T-SNARE affecting a late Golgi compartment protein...	[more]

BLAST of GT622069 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G28490.1	1.346e-72	61.40	\| Symbols: SYP61, ATSYP61, OSM1 \| syntaxin of plan...	[more]
AT1G28490.2	1.185e-52	61.85	\| Symbols: SYP61, ATSYP61, OSM1 \| syntaxin of plan...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil domain	PFAM	PF05739	SNARE	coord: 157..218 score: 1.6
IPR000727	Target SNARE coiled-coil domain	SMART	SM00397	no description	coord: 147..214 score: 9.3
IPR000727	Target SNARE coiled-coil domain	PROFILE	PS50192	T_SNARE	coord: 152..214 score: 12
IPR010989	t-SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..105 score: 1.6
IPR015260	Syntaxin 6, N-terminal	PFAM	PF09177	Syntaxin-6_N	coord: 7..99 score: 1.2
None	No IPR available	GENE3D	1.20.5.110	no description	coord: 154..216 score: 1.3
None	No IPR available	GENE3D	1.20.58.90	no description	coord: 4..103 score: 1.1
None	No IPR available	PANTHER	PTHR12380	SYNTAXIN	coord: 6..244 score: 1.6
None	No IPR available	PANTHER	PTHR12380:SF10	SYNTAXIN 6	coord: 6..244 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 209..221 score: NAcoord: 228..243 score
None	No IPR available	SEG	seg	seg	coord: 38..50 score: NAcoord: 60..78 score: NAcoord: 88..127 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT622069 ID=GT622069; Name=GT622069; organism=Lens culinaris; type=EST; length=780bp
ATAACATGCCCTCAGCTCAAGATCCATTCTACGTTGTCAAATCCGAGATT
CAAGAATCTGTTGATAATTTGCAATCGAGTTTTGATCAATGGAAACGTAG
TTCTGATGCTGCGGAGCGAGGACGTGTTAAAAAGGAGGTTCTTGCTGGAT
GTGAAAGCATAGAGTGGCAGGTGGATGAATTGGAAAAAGCCATTGCTGTT
GCTTCTAAGGAACCTTCTTGGTATGGCATTGATGACGTGGAGATTGAAAA
TCGGAGGAGATGGACAAGCAGTGCCCGTACTCAGGTTCTCACAATGAAGA
AAACAGTGGATGCTGGAAAGAGCTCAAACACAACAAGCATTAATGGGATG
CACCGAGAACTGATGAGGCTACCGGATTCCTACCAAACTCATACATCCAA
CCATAATGCTGCCAATGACAATGATGACTTCATAGAATCAGAATCAGATA
GACAGATGCTTCTTATAAAGCAACAGGATGATGAGTTAGATGAACTTAGT
TTAAGTGTGCAAAGAATTGGAGGCGTTGGACTCACTATCCATGAAGAACT
CATGGCACAGGAAAAGATTATAGATGAACTCGGCAACGAGATGGATAGTA
CATCAAATCGCCTAGATTTTGTCCAAAAAAAAGTGGCAATGGTTATGAAG
AAGGCTAGTGCAAAGGGCCAGATCATGATGATATTGGGCTTGTTGGCTCT
GTTCATTTTCCTATTTTTCTTAGTCTTCCTTACATAGTTAGTGTTACTGA
GCTGTTTGTATATGGAAAACTGATCTCATT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport
GO:0048193	Golgi vesicle transport

Vocabulary: **INTERPRO**
Term	Definition
IPR000727	T_SNARE_dom
IPR010989	SNARE
IPR015260	Syntaxin-6_N

Search form