GT623866

EST Overview
NameGT623866
Unique NameGT623866
TypeEST
OrganismLens culinaris (lentil)
Sequence length460
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT623866 vs. TrEMBL
Match: C6SZG8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.869e-32
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEEPVDQKR LEESCKPKCV+PLLEYQACIKRI GDESGQKHCTGQYFDYW C+DKCVAPKLF KLK
Sbjct:    2 ADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCVAPKLFTKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: C6T1W4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.085e-31
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEEPVDQKR LEESCKPKCV+PLLEYQACIKRI GD+SGQKHCTGQYFDYW C+DKCVAPKLF KLK
Sbjct:    2 ADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCVAPKLFTKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: B9H7R3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_714709 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.383e-31
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEEPVD K+ LEE+CKPKCVRPLLEYQAC+KRIQGDESG KHCTGQYFDYW CVDKCVAPKLF KLK
Sbjct:    2 ADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCVAPKLFTKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: B9GTK0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551330 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.672e-30
Identity = 56/68 (82.35%), Postives = 64/68 (94.12%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEE VDQK+ LE+SCKPKCV+PLLEY+AC+KR++GDESG KHCTGQYFDYWYC+DKCVAPKLF KLK
Sbjct:   17 ADEELVDQKKYLEDSCKPKCVKPLLEYEACVKRVEGDESGHKHCTGQYFDYWYCIDKCVAPKLFSKLK 84          
BLAST of GT623866 vs. TrEMBL
Match: B9GTJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_710785 PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.773e-30
Identity = 59/68 (86.76%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEEPVD K+ LEESCKPKCVRPLLEYQAC+KRIQGDE+G KHCTGQYFDYW CVDKCVA KLF KLK
Sbjct:    2 ADEEPVDPKKYLEESCKPKCVRPLLEYQACVKRIQGDETGHKHCTGQYFDYWSCVDKCVALKLFSKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: D7KCN0_ARALY (Predicted protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679246 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.326e-29
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            AD+E VD K+ LEESCKPKCV+PLLEYQAC+KRIQGD+SG KHCTGQYFDYW+C+DKCVAPKLF KLK
Sbjct:    2 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWHCIDKCVAPKLFAKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: Q0WWE3_ARATH (AT1G15120 protein OS=Arabidopsis thaliana GN=AT1G15120 PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.954e-29
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            AD+E VD K+ LEESCKPKCV+PLLEYQAC+KRIQGD+SG KHCTGQYFDYW C+DKCVAPKLF KLK
Sbjct:    2 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: Q8LDP7_ARATH (Putative ubiquinol--cytochrome-c reductase OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.466e-28
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            AD+E VD K+ LEESCKPKCV+PLLEYQAC+KRIQ D+SG KHCTGQYFDYW C+DKCVAPKLF KLK
Sbjct:    2 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQSDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: B9H7R2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651547 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.500e-28
Identity = 52/68 (76.47%), Postives = 63/68 (92.65%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ADEE VDQK+ LE+SCKPKCV+PLLEY+AC+KR++GD++ QKHCTGQYFDYW+C+DKCVAPKL  KLK
Sbjct:    2 ADEELVDQKKYLEDSCKPKCVKPLLEYEACVKRVEGDDTSQKHCTGQYFDYWFCIDKCVAPKLLSKLK 69          
BLAST of GT623866 vs. TrEMBL
Match: B9T2H1_RICCO (Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative OS=Ricinus communis GN=RCOM_0454060 PE=4 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.992e-26
Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVA 180
            ADEEPVDQK+ LEESCKPKCV+PLLEY+AC+KRI+GDE+G KHCTGQYFDYW CVDKCV+
Sbjct:   36 ADEEPVDQKKYLEESCKPKCVKPLLEYEACVKRIRGDETGHKHCTGQYFDYWSCVDKCVS 95          
BLAST of GT623866 vs. SwissProt
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.700e-26
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            +DEE VD K  LE SCKPKCVR L EYQAC KR++GDESG KHCTGQYFDYW+C+DKCVA KLF  LK
Sbjct:    2 SDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVAAKLFDHLK 69          
BLAST of GT623866 vs. SwissProt
Match: QCR6_DICDI (Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum GN=uqcrh PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.024e-7
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 1
Query:   34 LEESCKPKCVRPLLEYQACIKRIQGDESGQK-HCTGQYFDYWYCVDKCVAPKLFPKLK 204
            ++E C   C +    YQAC  R+   E  +K +C GQ+ ++  C+DKCV PKLF +LK
Sbjct:   12 IQEGCASGCEKSWSAYQACSGRVAKLEHDEKANCLGQFLEHVQCIDKCVGPKLFAQLK 69          
BLAST of GT623866 vs. TAIR peptide
Match: AT1G15120.1 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5203091-5203897 FORWARD LENGTH=69)

HSP 1 Score: 131.339 bits (329), Expect = 2.210e-31
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVAPKLFPKLK 204
            AD+E VD K+ LEESCKPKCV+PLLEYQAC+KRIQGD+SG KHCTGQYFDYW C+DKCVAPKLF KLK
Sbjct:    2 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of GT623866 vs. TAIR peptide
Match: AT2G01090.2 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr2:80179-80957 FORWARD LENGTH=62)

HSP 1 Score: 115.546 bits (288), Expect = 1.255e-26
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 1
Query:    4 DEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVA 180
            +E+ VDQKR  EESCKPKCV+PLLEYQAC+KRIQ DESG KHCTGQYFDYW+CVDKCV+
Sbjct:    3 EEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCVS 61          
BLAST of GT623866 vs. TAIR peptide
Match: AT2G01090.1 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr2:80179-80957 FORWARD LENGTH=62)

HSP 1 Score: 115.546 bits (288), Expect = 1.255e-26
Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 1
Query:    4 DEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKCVA 180
            +E+ VDQKR  EESCKPKCV+PLLEYQAC+KRIQ DESG KHCTGQYFDYW+CVDKCV+
Sbjct:    3 EEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCVS 61          
BLAST of GT623866 vs. TAIR peptide
Match: AT1G15120.2 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5202648-5203950 FORWARD LENGTH=166)

HSP 1 Score: 114.775 bits (286), Expect = 2.141e-26
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 1
Query:    1 ADEEPVDQKRLLEESCKPKCVRPLLEYQACIKRIQGDESGQKHCTGQYFDYWYCVDKC 174
            AD+E VD K+ LEESCKPKCV+PLLEYQAC+KRIQGD+SG KHCTGQYFDYW C+DKC
Sbjct:   69 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKC 126          
The following BLAST results are available for this feature:
BLAST of GT623866 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZG8_SOYBN4.869e-3291.18Putative uncharacterized protein OS=Glycine max PE... [more]
C6T1W4_SOYBN1.085e-3189.71Putative uncharacterized protein OS=Glycine max PE... [more]
B9H7R3_POPTR5.383e-3188.24Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GTK0_POPTR2.672e-3082.35Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GTJ9_POPTR7.773e-3086.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7KCN0_ARALY1.326e-2982.35Predicted protein (Fragment) OS=Arabidopsis lyrata... [more]
Q0WWE3_ARATH2.954e-2982.35AT1G15120 protein OS=Arabidopsis thaliana GN=AT1G1... [more]
Q8LDP7_ARATH1.466e-2880.88Putative ubiquinol--cytochrome-c reductase OS=Arab... [more]
B9H7R2_POPTR2.500e-2876.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T2H1_RICCO3.992e-2683.33Ubiquinol-cytochrome c reductase complex 7.8 kDa p... [more]
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BLAST of GT623866 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
QCR6_SOLTU3.700e-2675.00Cytochrome b-c1 complex subunit 6 OS=Solanum tuber... [more]
QCR6_DICDI5.024e-741.38Probable cytochrome b-c1 complex subunit 6 OS=Dict... [more]
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BLAST of GT623866 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G15120.12.210e-3182.35| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT2G01090.21.255e-2681.36| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT2G01090.11.255e-2681.36| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT1G15120.22.141e-2681.03| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023184Ubiquinol-cytochrome C reductase hinge domainGENE3D1.10.287.20no descriptioncoord: 2..68
score: 4.1
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 6..68
score: 3.2
IPR023184Ubiquinol-cytochrome C reductase hinge domainSUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 1..68
score: 4.7

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT623866 ID=GT623866; Name=GT623866; organism=Lens culinaris; type=EST; length=460bp
GCTGACGAGGAACCTGTTGATCAGAAGAGACTTCTGGAAGAGTCTTGCAA
ACCGAAGTGTGTCAGACCGTTACTTGAATACCAGGCATGCATTAAAAGGA
TACAAGGTGATGAGTCCGGGCAGAAACACTGCACTGGACAGTACTTTGAT
TATTGGTATTGTGTTGACAAATGTGTTGCACCAAAGCTATTCCCCAAATT
GAAGTAATAGGGGATCATTTTTTGGTATTATGTGATATTGTTCTGTTTTA
TGTTCAATTCCAAATAACTGCTCCTAAACTTGTGATTTTGTATCCAAATC
TCATGTCCTGTAATGTTTTTATTTTGCTTATCGGGAAATTTTGATCCCAG
GGAGACCTTGGATGATAATTAATAATAACATTATGCCAATTCATAACTTG
GAGACTTAGTAGGAAGTATGCTGGTATAGTGACCCAACATTTTTTATAAT
GTTTGAAATA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR023184Ubol_cytC_Rdtase_hinge_dom