GT624614

EST Overview


Name	GT624614
Unique Name	GT624614
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	720

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT624614 vs. TrEMBL
Match: D7TNS3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020239001 PE=4 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 1.038e-70
Identity = 132/166 (79.52%), Postives = 144/166 (86.75%), Query Frame = 2

Query:  221 SDSGDGNGVAISRRGSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            S + D NG  I  +GSKVLLKGM Y EL+ WVQSHGYRPGQA+MLWKR+YGNNIWAH  DELEGLNKDFK MLSE+A+FKAL +K+   ASDGTRKILF LDDGLVIETV+IPCD GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEIVEQAV+ARRLF+ E
Sbjct:   64 SSAADENGNPI--KGSKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSEHAEFKALTLKDSIKASDGTRKILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQAVYARRLFSSE 227

[Close]

BLAST of GT624614 vs. TrEMBL
Match: C5XEK5_SORBI (Putative uncharacterized protein Sb03g029230 OS=Sorghum bicolor GN=Sb03g029230 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.025e-66
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 2

Query:  263 GSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            GSK +LKGM+YSELE WVQ+ G+RPGQAMMLWK +YGNN+WAH  DEL GLNKDF+KM++E+AD KAL VK+IHTASDGTRKILF L+DG VIETV+IPC  GRTTVCVSSQVGCAMNCQFC+TGRMGL++HL+ AEIVEQAVFARRLF+ E
Sbjct:   45 GSKAMLKGMDYSELENWVQAQGFRPGQAMMLWKCLYGNNVWAHCYDELTGLNKDFRKMITEHADLKALTVKDIHTASDGTRKILFSLEDGSVIETVIIPCARGRTTVCVSSQVGCAMNCQFCFTGRMGLRKHLSTAEIVEQAVFARRLFSDE 196

[Close]

BLAST of GT624614 vs. TrEMBL
Match: Q93XX3_ARATH (Putative uncharacterized protein At1g60230 OS=Arabidopsis thaliana GN=At1g60230/ T13D8.12 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.005e-65
Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 2

Query:   14 MNNWMSMAAMGAITNSTFLLFTPPILKTIIPF--SLTKTSPFLISLTTPSRRFXXXXXXXXXXXXXXTFNFSDSGDGNGVAI-------SRRGS-------KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            M+  M    +  +TNS  ++ TP +L +   F  +LT  SP L    T S  F                 FS S   +   +       S +GS       KV+LKGM Y+ L++WVQSHG+RPGQA+MLWKR+Y +NIWA++ DELEGLNKD K+M+SE+A+F AL+ K+I +ASDGTRKILF LDDGLVIETVVIPCD GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEIVEQAV+ARRL + E
Sbjct:    1 MSTTMRRLGIITLTNSAAVV-TPSLLSSTAAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSC-------FSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHE 243

[Close]

BLAST of GT624614 vs. TrEMBL
Match: D7KXB2_ARALY (Radical SAM domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_893522 PE=4 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.005e-65
Identity = 136/250 (54.40%), Postives = 170/250 (68.00%), Query Frame = 2

Query:   14 MNNWMSMAAMGAITNSTFLLFTPPILKTIIPFSLTKTSPFLISLTTPSRRFXXXXXXXXXXXXXXTFNFSDSGDGNGVAI--------SRRGS-------KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            M+  M    +  +TNS  ++ TP +L +   F      P  ++L +P R                +F+   S   +  A         S +GS       KV+LKGM Y+ L++WVQSHG+RPGQA+MLWKR+Y +NIWA++ DELEGLNKD K+M+SE+A+F AL+ K+I +ASDGTRKILF LDDGLVIETVVIPCD GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEIVEQAV+ARRL + E
Sbjct:    1 MSTTMRRLGIITLTNSAAVV-TPTLLSSTAAF------PGTLTLPSPLRNHRLTNSIRFHEYRSLSFSCFSSSSSSSAAYLPSLEEYPSTKGSVARDDNQKVILKGMTYAALQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHE 243

[Close]

BLAST of GT624614 vs. TrEMBL
Match: O80746_ARATH (T13D8.12 protein OS=Arabidopsis thaliana GN=T13D8.12 PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.714e-65
Identity = 139/246 (56.50%), Postives = 169/246 (68.70%), Query Frame = 2

Query:   32 MAAMGAIT-NSTFLLFTPPILKTIIPF--SLTKTSPFLISLTTPSRRFXXXXXXXXXXXXXXTFNFSDSGDGNGVAI-------SRRGS-------KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            M  +G IT  ++  + TP +L +   F  +LT  SP L    T S  F                 FS S   +   +       S +GS       KV+LKGM Y+ L++WVQSHG+RPGQA+MLWKR+Y +NIWA++ DELEGLNKD K+M+SE+A+F AL+ K+I +ASDGTRKILF LDDGLVIETVVIPCD GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEIVEQAV+ARRL + E
Sbjct:    1 MRRLGIITLTNSAAVVTPSLLSSTAAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSC-------FSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHE 239

[Close]

BLAST of GT624614 vs. TrEMBL
Match: B4FQV1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.924e-65
Identity = 116/152 (76.32%), Postives = 136/152 (89.47%), Query Frame = 2

Query:  263 GSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            GSK +LKGM+YSELE WVQ+ G+RPGQAMMLWK +YGNN+WAH  DEL GLNKDF+KM++E+AD KAL +K+IH ASDGTRKILF L+DG VIETV+IPC  GRTT+CVSSQVGCAMNCQFC+TGRMGL++HL+ AEIVEQAVFARRLF+ E
Sbjct:   47 GSKAMLKGMDYSELENWVQAQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMITEHADLKALTMKDIHIASDGTRKILFSLEDGSVIETVIIPCARGRTTICVSSQVGCAMNCQFCFTGRMGLRKHLSTAEIVEQAVFARRLFSDE 198

[Close]

BLAST of GT624614 vs. TrEMBL
Match: Q0JKY3_ORYSJ (Os01g0640800 protein OS=Oryza sativa subsp. japonica GN=Os01g0640800 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.475e-64
Identity = 117/152 (76.97%), Postives = 136/152 (89.47%), Query Frame = 2

Query:  263 GSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            GS+V+LKGM+Y ELE WV+S G+RPGQAMMLWK +YGNN+WAH  DEL GLNKDF+KML+++AD KAL VK+I  ASDGTRKILF L+DG VIETVVIPC +GRTTVCVSSQVGCAMNCQFC+TGRMGL++HL+ AEIVEQAVFARRLF+ E
Sbjct:   43 GSRVMLKGMDYPELENWVRSQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMLTDHADLKALTVKDILNASDGTRKILFSLEDGSVIETVVIPCTSGRTTVCVSSQVGCAMNCQFCFTGRMGLRKHLSTAEIVEQAVFARRLFSDE 194

[Close]

BLAST of GT624614 vs. TrEMBL
Match: B8ACC7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03021 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.475e-64
Identity = 117/152 (76.97%), Postives = 136/152 (89.47%), Query Frame = 2

Query:  263 GSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            GS+V+LKGM+Y ELE WV+S G+RPGQAMMLWK +YGNN+WAH  DEL GLNKDF+KML+++AD KAL VK+I  ASDGTRKILF L+DG VIETVVIPC +GRTTVCVSSQVGCAMNCQFC+TGRMGL++HL+ AEIVEQAVFARRLF+ E
Sbjct:   43 GSRVMLKGMDYPELENWVRSQGFRPGQAMMLWKCLYGNNVWAHCYDELAGLNKDFRKMLTDHADLKALTVKDILNASDGTRKILFSLEDGSVIETVVIPCTSGRTTVCVSSQVGCAMNCQFCFTGRMGLRKHLSTAEIVEQAVFARRLFSDE 194

[Close]

BLAST of GT624614 vs. TrEMBL
Match: B9SHC0_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0528960 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.202e-64
Identity = 120/164 (73.17%), Postives = 140/164 (85.37%), Query Frame = 2

Query:  230 GDGNGVAISRRGSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNN-IWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            G  +  AI  +  KVLLKGM+Y+ELEKWVQSHG+RPGQAMMLWKR+Y NN   AH+ DELEGLNKDFKKMLSE+A  KA++++++ TASDGT+KILF LDD +VIETV+IPCD GRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLT AEIV+Q V A+RL T +
Sbjct:   64 GSDDTSAIPNKDGKVLLKGMSYTELEKWVQSHGFRPGQAMMLWKRLYANNNTLAHYFDELEGLNKDFKKMLSEHARLKAISMEDVVTASDGTKKILFRLDDEMVIETVIIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTTAEIVDQVVSAQRLLTSD 227

[Close]

BLAST of GT624614 vs. TrEMBL
Match: A9NVJ4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.529e-57
Identity = 103/151 (68.21%), Postives = 125/151 (82.78%), Query Frame = 2

Query:  266 SKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            +K L+KGM Y ELE WVQS  YR GQAMMLWK +YGN +WA H DE++ L+K F+  L + A+F   ++K++++ASDGTRKILF L DGL+IETV+IPC+ GRTT+CVSSQVGCAMNCQFCYTGRMGLKR+LTAAEIVEQ V+ARR FT E
Sbjct:  101 AKTLVKGMTYHELEAWVQSLSYRAGQAMMLWKCLYGNGMWAQHVDEMQALSKQFRATLEKTAEFSVFSLKDVYSASDGTRKILFSLGDGLIIETVLIPCERGRTTLCVSSQVGCAMNCQFCYTGRMGLKRNLTAAEIVEQVVYARRHFTNE 251

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_SYNFM (Ribosomal RNA large subunit methyltransferase N OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rlmN PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.842e-25
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 2

Query:  272 VLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNI--WAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            V +K     ELE+WVQ  G R  +A  L++ +YG  +  W+  +D    L++ F+  L    +  AL+V +   A DGT K LF L DG  IE V+IP D  R+T+CVSSQVGCA+ C+FC TG +G KR+L+AAEIV+Q    +R
Sbjct:    4 VCVKDFTLPELEEWVQGIGERSFRARQLFRHVYGRGVRSWSECSD----LSRMFRVQLEHGVELDALSVLKKEQADDGTSKYLFGLRDGHSIEAVLIP-DLPRSTLCVSSQVGCALGCKFCLTGSLGFKRNLSAAEIVDQVCQVQR 144

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_GEOUR (Ribosomal RNA large subunit methyltransferase N OS=Geobacter uraniireducens (strain Rf4) GN=rlmN PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.660e-23
Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 2

Query:  269 KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            KV +K     ELE ++   G    +A  ++K +Y  +  A    ++  L+KDF++ L + A    L  + +  ++DGT+K LF L DG  +E+V+IP D  RTT+C+SSQVGCAM C+FC TG   L R+LT AEIV Q    +R
Sbjct:    3 KVDIKNFTLQELEAYIAGQGKERFRAKQIFKWLYQQD--AREFADMTNLSKDFRQELEKTAWISNLDAEAVEASADGTKKYLFRLADGNAVESVLIP-DEDRTTLCISSQVGCAMGCEFCLTGTFKLTRNLTTAEIVNQVCAVKR 144

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_GEOSL (Ribosomal RNA large subunit methyltransferase N OS=Geobacter sulfurreducens GN=rlmN PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.252e-22
Identity = 60/144 (41.67%), Postives = 87/144 (60.42%), Query Frame = 2

Query:  278 LKGMNYSELEKWVQSHGYRPGQAMMLWKRMY--GNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            +KG++  ELE+++   G    +A  ++K +Y  G   +A  TD    L K+ ++ L E A    L+ + +  + DGTRK LF LDDG  +E+V+IP +  R T+C+SSQVGCAM C+FC TG   L R+LT AEIV Q    +R
Sbjct:    7 IKGLSIDELERFLLGKGKERYRARQIFKWLYQRGATSFAEMTD----LAKELRRDLEETARISTLSPEALEISRDGTRKYLFRLDDGCSVESVLIP-EEDRNTLCISSQVGCAMACEFCLTGTFRLTRNLTTAEIVNQVCAVQR 145

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_PELPD (Ribosomal RNA large subunit methyltransferase N OS=Pelobacter propionicus (strain DSM 2379) GN=rlmN PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.841e-22
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 2

Query:  269 KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            K  LK +    LE++++  G    +A  ++K +Y ++  A    E+  ++KD +  L   A    L  + +    DGTRK LF L+DG  +E+V+IP D GR T+C+SSQVGCAM C FC TG   L R+LT AEIV Q +  RR
Sbjct:    4 KTDLKNLTLPALEQFLRGQGKERFRATQVFKWIYQHD--ARSFQEMTNISKDLRAELEAKAYISNLEPEAVEVGGDGTRKYLFGLEDGNSVESVLIP-DEGRNTLCISSQVGCAMGCAFCLTGTFRLTRNLTTAEIVNQIMAVRR 145

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_HAHCH (Ribosomal RNA large subunit methyltransferase N OS=Hahella chejuensis (strain KCTC 2396) GN=rlmN PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.251e-21
Identity = 61/153 (39.87%), Postives = 90/153 (58.82%), Query Frame = 2

Query:  251 ISRRGSKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLF 709
            +S   +K+ L GMN S+LE + +S G +  +A  L K MY  ++     D +  ++K  ++ L E A+     V     ++DGTRK +  L  G  IETV IP D GR T+CVSSQ+GC+++C FC TG+ G  R+L++AEI+ Q   A R F
Sbjct:    1 MSGSSAKINLLGMNRSDLETFFESLGEKKFRATQLMKWMY--HLGVSDFDLMTNMSKALREKLKEVAEVSVPEVIYEDISADGTRKWVMRLAGGNSIETVYIP-DNGRGTLCVSSQIGCSLDCSFCSTGKQGFNRNLSSAEIIGQLWIAARSF 150

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_MARAV (Ribosomal RNA large subunit methyltransferase N OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rlmN PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.247e-21
Identity = 57/147 (38.78%), Postives = 90/147 (61.22%), Query Frame = 2

Query:  269 KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLF 709
            KV L GM  ++LE + ++ G +  +A  + + M+   +     D++  ++K  ++ L E A+ +   V    T+ DGTRK +  +D+G  +ETV+IP D  R T+CVSSQ+GC+++C FC TG+ G  R+LTAAEI+ Q   ARR F
Sbjct:    7 KVNLLGMPKAKLEAFFETLGEKRFRAQQVLQWMHQRGV--DDFDQMTNMSKSLREQLKEVAEIRGPEVVYDETSKDGTRKWVMRMDNGNSVETVLIP-DGERGTLCVSSQIGCSLDCTFCSTGKRGFNRNLTAAEIIGQVWVARRAF 150

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_GEOMG (Ribosomal RNA large subunit methyltransferase N OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rlmN PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.247e-21
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 2

Query:  269 KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            K+ +K +   +L  ++   G    +A  ++K +Y  +  A    E+  L KD ++ L E A    L  + +  + DGTRK LF L+DG  +E+V+IP +  RTT+C+SSQVGCAM C+FC TG   L R+LTA EIV Q    RR
Sbjct:    5 KIDIKNLTLDDLIAFLAGKGKERYRARQIFKWLYQKD--ARSFAEMTDLAKDLRRDLEETAVISDLEPEAMEVSRDGTRKYLFRLEDGNTVESVLIP-EEDRTTLCISSQVGCAMACEFCLTGTFRLTRNLTAGEIVNQICAVRR 146

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_PSYWF (Ribosomal RNA large subunit methyltransferase N OS=Psychrobacter sp. (strain PRwf-1) GN=rlmN PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.236e-20
Identity = 57/146 (39.04%), Postives = 87/146 (59.59%), Query Frame = 2

Query:  266 SKVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTD--ELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCD----TGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQ 685
            +K  + GMN  +L  + +  G +P +A  + K +Y + +    TD  ++  L+K  ++ LSE A  +   V     + DGTRK +F +  G ++ETV+IP D     GR T+C+SSQVGCA++C FC TG+ G +R LTAAEI+ Q
Sbjct:   22 TKTNILGMNQEQLGAYFKHIGEKPFRATQVMKWIYQHGV----TDFAQMTNLSKGLREKLSEQACIELPEVMHKEFSEDGTRKWVFKVAGGSLVETVLIPADDSKVNGRKTLCISSQVGCALDCSFCSTGKQGFERDLTAAEIIGQ 163

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN_MAGSM (Ribosomal RNA large subunit methyltransferase N OS=Magnetococcus sp. (strain MC-1) GN=rlmN PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.236e-20
Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 2

Query:  314 VQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARR 703
            V+  G +P +A  LW  ++     A H DE+  L+ DF++ LS  +      V     + DGT K L  L DG  IETV IP D  R T+C+SSQVGC ++C FC+TG  G  R+LT +EIV+Q +FARR
Sbjct:   21 VEQLGEKPFRARQLWSWLHVK--LAQHLDEMSDLSIDFRRKLSALSTPLRPEVSTHQISRDGTEKWLLRLSDGQQIETVYIPEDE-RGTLCISSQVGCTLSCPFCHTGAQGFARNLTPSEIVQQVLFARR 147

[Close]

BLAST of GT624614 vs. SwissProt
Match: RLMN1_MYXXD (Ribosomal RNA large subunit methyltransferase N 1 OS=Myxococcus xanthus (strain DK 1622) GN=rlmN1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.236e-20
Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 2

Query:  326 GYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDG-TRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 706
            G+ P     LW  +Y  +  A   DEL+GL  +  +ML E+     LA      +SDG T K+L  LDDG  IETV++    GR TVC+S+Q GCAM C FC TG+MGL RHLT  EIV Q +   R+
Sbjct:   25 GFGPYHRDQLWTALYRRH--ATTFDELDGLKPELLRMLREHTRLGQLATHHESFSSDGFTHKLLLRLDDGQTIETVLMRFK-GRATVCISTQAGCAMGCVFCATGQMGLSRHLTPGEIVGQILHVNRI 149

[Close]

BLAST of GT624614 vs. TAIR peptide
Match: AT1G60230.1 (| Symbols: | Radical SAM superfamily protein | chr1:22212223-22214346 REVERSE LENGTH=458)

HSP 1 Score: 253.832 bits (647), Expect = 6.765e-68
Identity = 140/251 (55.78%), Postives = 171/251 (68.13%), Query Frame = 2

Query:   14 MNNWMSMAAMGAITNSTFLLFTPPILKTIIPF--SLTKTSPFLISLTTPSRRFXXXXXXXXXXXXXXTFNFSDSGDGNGVAI-------SRRGS-------KVLLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLFTRE 718
            M+  M    +  +TNS  ++ TP +L +   F  +LT  SP L    T S  F                 FS S   +   +       S +GS       KV+LKGM Y+ L++WVQSHG+RPGQA+MLWKR+Y +NIWA++ DELEGLNKD K+M+SE+A+F AL+ K+I +ASDGTRKILF LDDGLVIETVVIPCD GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEIVEQAV+ARRL + E
Sbjct:    1 MSTTMRRLGIITLTNSAAVV-TPSLLSSTAAFPGTLTLPSPLLSDRLTNSILFHESRSLSFSC-------FSSSSSSSAAYLPSLEEYPSAKGSVKRDDNQKVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEHAEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQAVYARRLLSHE 243

[Close]

BLAST of GT624614 vs. TAIR peptide
Match: AT3G19630.1 (| Symbols: | Radical SAM superfamily protein | chr3:6818676-6820674 REVERSE LENGTH=372)

HSP 1 Score: 84.7297 bits (208), Expect = 5.435e-17
Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 2

Query:  296 SELEKWVQSHGYRPGQAMMLWKRMYGNN--IWAHHTDELEGLNKDFKKMLSENADFKALAVKEIHTASDGTR-KILFILDDGLVIETVVIPCDTG-------------RTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRL 706
            SE++   +S G  P  A+ +WK +  N   +W    DE+  L      +L         ++  +  +SDGT  K+L  L +G  +E VV+  DT              R+T+C+SSQVGC M C FC TG MG K +LT+ EIVEQ V A R+
Sbjct:   10 SEIKSEFESAGINPKFAIQIWKYVIQNPDCVW----DEIPSLPSAAYSLLHSKFKTLTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCISSQVGCKMGCTFCATGTMGFKSNLTSGEIVEQLVHASRI 158

[Close]

BLAST of GT624614 vs. TAIR peptide
Match: AT2G39670.1 (| Symbols: | Radical SAM superfamily protein | chr2:16534303-16536986 FORWARD LENGTH=428)

HSP 1 Score: 77.7962 bits (190), Expect = 6.644e-15
Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = 2

Query:  275 LLKGMNYSELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKA--LAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTG-----RTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLF 709
            +L GM+  EL++   + G    +   L   +Y   +  +  ++   L   F+K L +   FK     + +  TA+DGT K+L  L+D L+IETV IP         R T CVSSQVGC + C FC TG+ G  R+L   EI+EQ +    +F
Sbjct:   63 VLIGMSEPELQELAINLGQEGYRGKQLHHLIYKRKV--NKVEDFSNLPLTFRKGLVDGG-FKVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQDDEKGITRLTACVSSQVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVF 211

[Close]

BLAST of GT624614 vs. TAIR peptide
Match: AT2G39670.2 (| Symbols: | Radical SAM superfamily protein | chr2:16534303-16536986 FORWARD LENGTH=431)

HSP 1 Score: 75.8702 bits (185), Expect = 2.525e-14
Identity = 56/158 (35.44%), Postives = 79/158 (50.00%), Query Frame = 2

Query:  275 LLKGMNYSELEKW------VQSHGYRPGQAMMLWKRMYGNNIWAHHTDELEGLNKDFKKMLSENADFKA--LAVKEIHTASDGTRKILFILDDGLVIETVVIPCDTG-----RTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQAVFARRLF 709
            +L GM+  EL++       +   GYR  Q   L  +   N +     ++   L   F+K L +   FK     + +  TA+DGT K+L  L+D L+IETV IP         R T CVSSQVGC + C FC TG+ G  R+L   EI+EQ +    +F
Sbjct:   63 VLIGMSEPELQELAINLVLIFQEGYRGKQLHHLIYKRKVNKV-----EDFSNLPLTFRKGLVDGG-FKVGRSPIYQTVTATDGTIKLLLKLEDNLLIETVGIPVQDDEKGITRLTACVSSQVGCPLRCSFCATGKGGFSRNLQRHEIIEQVLAIEDVF 214

The following BLAST results are available for this feature:

BLAST of GT624614 vs. TrEMBL
BLAST of GT624614 vs. SwissProt
BLAST of GT624614 vs. TAIR peptide

BLAST of GT624614 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7TNS3_VITVI	1.038e-70	79.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
C5XEK5_SORBI	2.025e-66	78.29	Putative uncharacterized protein Sb03g029230 OS=So...	[more]
Q93XX3_ARATH	1.005e-65	55.78	Putative uncharacterized protein At1g60230 OS=Arab...	[more]
D7KXB2_ARALY	1.005e-65	54.40	Radical SAM domain-containing protein OS=Arabidops...	[more]
O80746_ARATH	1.714e-65	56.50	T13D8.12 protein OS=Arabidopsis thaliana GN=T13D8....	[more]
B4FQV1_MAIZE	2.924e-65	76.32	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
Q0JKY3_ORYSJ	2.475e-64	76.97	Os01g0640800 protein OS=Oryza sativa subsp. japoni...	[more]
B8ACC7_ORYSI	2.475e-64	76.97	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9SHC0_RICCO	7.202e-64	73.17	Catalytic, putative OS=Ricinus communis GN=RCOM_05...	[more]
A9NVJ4_PICSI	6.529e-57	68.21	Putative uncharacterized protein OS=Picea sitchens...	[more]

BLAST of GT624614 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RLMN_SYNFM	2.842e-25	44.52	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_GEOUR	2.660e-23	40.69	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_GEOSL	2.252e-22	41.67	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PELPD	3.841e-22	40.69	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_HAHCH	3.251e-21	39.87	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_MARAV	4.247e-21	38.78	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_GEOMG	4.247e-21	40.00	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PSYWF	1.236e-20	39.04	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_MAGSM	1.236e-20	43.85	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN1_MYXXD	1.236e-20	45.31	Ribosomal RNA large subunit methyltransferase N 1 ...	[more]

BLAST of GT624614 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G60230.1	6.765e-68	55.78	\| Symbols: \| Radical SAM superfamily protein \| ch...	[more]
AT3G19630.1	5.435e-17	35.95	\| Symbols: \| Radical SAM superfamily protein \| ch...	[more]
AT2G39670.1	6.644e-15	34.87	\| Symbols: \| Radical SAM superfamily protein \| ch...	[more]
AT2G39670.2	2.525e-14	35.44	\| Symbols: \| Radical SAM superfamily protein \| ch...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 38..60 score
None	No IPR available	SEG	seg	seg	coord: 56..69 score
None	No IPR available	SEG	seg	seg	coord: 8..44 score
None	No IPR available	SEG	seg	seg	coord: 13..24 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT624614 ID=GT624614; Name=GT624614; organism=Lens culinaris; type=EST; length=720bp
CAATGAACTCAGCATGAATAATTGGATGAGCATGGCGGCCATGGGTGCAA
TAACAAACTCCACATTTCTTCTATTTACACCACCCATTCTCAAAACCATT
ATCCCTTTCTCTCTCACCAAAACCTCGCCGTTTCTCATTTCTCTCACCAC
TCCCTCTCGCCGCTTCCTTTCCGCTTCTTCCCTTCATTCGGTGGTCTCCG
CTGACCACACCTTCAACTTCTCTGATTCTGGTGATGGAAACGGCGTTGCG
ATTTCAAGGAGAGGTTCTAAAGTGCTTCTTAAAGGGATGAATTACTCTGA
ACTTGAAAAATGGGTTCAATCACATGGATACAGACCAGGGCAGGCTATGA
TGTTATGGAAGCGTATGTATGGTAACAATATTTGGGCGCATCATACTGAT
GAGTTGGAAGGTTTGAACAAAGATTTCAAGAAGATGTTGAGTGAAAATGC
AGATTTCAAGGCACTAGCTGTGAAAGAAATTCACACGGCCTCTGATGGAA
CTAGGAAGATTTTATTTATATTGGATGATGGGCTGGTCATAGAAACAGTT
GTCATACCTTGTGATACCGGCAGGACTACCGTGTGTGTTTCCAGTCAAGT
TGGATGTGCCATGAATTGTCAATTTTGCTATACTGGAAGAATGGGTCTTA
AGCGACATCTTACTGCTGCAGAAATAGTTGAGCAGGCCGTTTTTGCAAGA
CGGCTATTCACAAGGGAAGT

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