GT626577

EST Overview
NameGT626577
Unique NameGT626577
TypeEST
OrganismLens culinaris (lentil)
Sequence length663
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT626577 vs. TrEMBL
Match: A5BD53_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014803 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.059e-15
Identity = 69/185 (37.30%), Postives = 91/185 (49.19%), Query Frame = 1
Query:    1 MQQQNMLSSPHMSATALLQKAAQIG------------------SXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQF---------QNVEEN-KKMPQQNLAGNL--CFGGSDKLTLDFLGVGGMVRNMSGGFSQREHQLHSMSNMNNLDPKLESTQANQ 465
            MQQ+N+  +PHMSATALLQKAAQ+G                  S         + SN   LRS ME+E                +SI+G   H    N G F         Q+   N  K+    L  +L    GGSD+LTLDFLGVGG+VRN+ GGFSQRE +   +  M++LD ++++  A Q
Sbjct:  117 MQQENL--APHMSATALLQKAAQMGPTTSSNSSSLLRGLGGSSSTGAKSDRQLLSSNFSSLRSQMENENHLQGLMNSLANGN--SSIFGGSGHAQENNFGGFNGRGITLEQQHKNTNFSKVDDAKLHQSLGVSMGGSDRLTLDFLGVGGVVRNVGGGFSQREQR--HVVEMSSLDSEIKTAAAAQ 295          
BLAST of GT626577 vs. TrEMBL
Match: B9S7A9_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0775740 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.680e-11
Identity = 56/138 (40.58%), Postives = 72/138 (52.17%), Query Frame = 1
Query:   28 PHMSATALLQKAAQIGSXXXXXXXX-----GVESNNEGLRSSM--------ESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMSGGFSQREHQ 402
            PHMSATALLQKAAQ+GS             G  S++ G++S+         E++                +SI+G+   +     G   N+EE K    Q L  N   GGSD+LT DFLGVG +VR+MSGGFSQRE Q
Sbjct:  412 PHMSATALLQKAAQMGSTSSTYSASLLRSFGSSSSSTGMKSAAANFGEIFSENDQNNLHDLMNSFAATGNSSIFGHGQENPYGTSGG--NLEEAKM--HQGL--NASIGGSDRLTRDFLGVGQVVRSMSGGFSQREKQ 543          
BLAST of GT626577 vs. TrEMBL
Match: C7SI20_THEHA (Putative C2H2 zinc finger protein OS=Thellungiella halophila PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.731e-8
Identity = 51/145 (35.17%), Postives = 65/145 (44.83%), Query Frame = 1
Query:   10 QNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAG----NLCFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQ 402
            QN  S+PHMSATALLQKAAQ+GS        G  +NN    ++  S                  S    M  +N  NL    N   N      N+ G       +GG +K        +T DFLGVG +VR+M  SGGF Q++ Q
Sbjct:  430 QNPNSTPHMSATALLQKAAQMGSTSSNNSNNGSNNNNNNNNNNASS---------------ILRSFGSGMYGENESNLHDLMNSFSNPGATGDNVNGVDSPFGSYGGVNKGLNTDKQSMTRDFLGVGQIVRSMSGSGGFQQQQQQ 559          
BLAST of GT626577 vs. TrEMBL
Match: D7LPZ3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904431 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.377e-7
Identity = 54/166 (32.53%), Postives = 71/166 (42.77%), Query Frame = 1
Query:   10 QNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNL--------CFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQLHSMSNMNNLDPKLEST 453
            QN  S+PHMSATALLQKAAQ+GS           +NN    S + S                 + IYG    +N  NL    N   N         GN+         +GG +K        +T DFLGVG +VR+M  SGGF Q++ Q        N   ++ S+
Sbjct:  427 QNPNSAPHMSATALLQKAAQMGSTSSNNNNGSNNNNNNNASSILRS---------------FGSGIYG----ENESNLQDLMNSFSN-----PGATGNVNGVDSPFGSYGGVNKGLSADKQSMTRDFLGVGQIVRSMSGSGGFQQQQQQQQQQQQHGNSRERVGSS 568          
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02070.1 (| Symbols: AtIDD5, IDD5 | indeterminate(ID)-domain 5 | chr2:505523-509154 FORWARD LENGTH=602)

HSP 1 Score: 56.225 bits (134), Expect = 1.828e-8
Identity = 52/152 (34.21%), Postives = 67/152 (44.08%), Query Frame = 1
Query:    1 MQQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNL--------CFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQ 402
            MQ  N  S+PHMSATALLQKAAQ+GS           +NN    S + S                 + IYG    +N  NL    N   N         GN+         +GG +K        +T DFLGVG +V++M  SGGF Q++ Q
Sbjct:  426 MQSPN--SAPHMSATALLQKAAQMGSTSSNNNNGSNTNNNNNASSILRS---------------FGSGIYG----ENESNLQDLMNSFSN-----PGATGNVNGVDSPFGSYGGVNKGLSADKQSMTRDFLGVGQIVKSMSGSGGFQQQQQQ 551          
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02080.2 (| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain 4 | chr2:518328-520619 REVERSE LENGTH=439)

HSP 1 Score: 55.4546 bits (132), Expect = 3.118e-8
Identity = 56/171 (32.75%), Postives = 73/171 (42.69%), Query Frame = 1
Query:    4 QQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNN-----EGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNV--------EENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMS--GGFSQREHQLHSMSNMNNLDPKLESTQANQPF 471
            +++N+ +  ++SATALLQKA Q+GS         V SN+      GL SS  S                       M +DNN NL    N              +       N    GSDKLTLDFLGVGGMVRN++  GG   R      +S    LD + +  + N PF
Sbjct:  289 REENLNAGSNVSATALLQKATQMGS---------VTSNDPSALFRGLASSSNSSSVIANHFGGGRI----------MENDNNGNLQGLMNSLAAVNGGGGSGGSIFDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVNRGGGGGGRGSARGGVS----LDGEAKFPEQNYPF 436          
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02080.1 (| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain 4 | chr2:518328-521170 REVERSE LENGTH=516)

HSP 1 Score: 55.4546 bits (132), Expect = 3.118e-8
Identity = 56/171 (32.75%), Postives = 73/171 (42.69%), Query Frame = 1
Query:    4 QQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNN-----EGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNV--------EENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMS--GGFSQREHQLHSMSNMNNLDPKLESTQANQPF 471
            +++N+ +  ++SATALLQKA Q+GS         V SN+      GL SS  S                       M +DNN NL    N              +       N    GSDKLTLDFLGVGGMVRN++  GG   R      +S    LD + +  + N PF
Sbjct:  366 REENLNAGSNVSATALLQKATQMGS---------VTSNDPSALFRGLASSSNSSSVIANHFGGGRI----------MENDNNGNLQGLMNSLAAVNGGGGSGGSIFDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVNRGGGGGGRGSARGGVS----LDGEAKFPEQNYPF 513          
The following BLAST results are available for this feature:
BLAST of GT626577 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
A5BD53_VITVI3.059e-1537.30Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S7A9_RICCO2.680e-1140.58Nucleic acid binding protein, putative OS=Ricinus ... [more]
C7SI20_THEHA4.731e-835.17Putative C2H2 zinc finger protein OS=Thellungiella... [more]
D7LPZ3_ARALY1.377e-732.53Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of GT626577 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G02070.11.828e-834.21| Symbols: AtIDD5, IDD5 | indeterminate(ID)-domain... [more]
AT2G02080.23.118e-832.75| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain... [more]
AT2G02080.13.118e-832.75| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..34
score: NAcoord: 51..66
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT626577 ID=GT626577; Name=GT626577; organism=Lens culinaris; type=EST; length=663bp
ATGCAACAACAGAACATGTTGTCCTCGCCACACATGTCAGCAACTGCATT
GCTTCAAAAGGCTGCTCAAATAGGTTCAACAACAACAACTATCAATAACA
ACGGTGTGGAATCTAATAATGAAGGATTAAGATCAAGCATGGAAAGCGAA
CACAATCAACATCTACATGGATTGCTGAACTCTCTTGGGAATGGAAACAC
TTCAATATATGGAAATATGAATCATGACAACAACATTAACCTTGGTCAGT
TTCAGAATGTGGAGGAGAATAAAAAGATGCCACAACAAAATCTAGCTGGT
AATTTGTGCTTTGGAGGATCAGATAAATTGACTTTGGATTTTCTTGGTGT
CGGAGGAATGGTGAGAAACATGAGTGGTGGATTTTCACAAAGAGAACATC
AACTACACTCCATGAGTAATATGAACAACTTGGATCCTAAATTGGAATCA
ACACAAGCAAACCAACCTTTTTGAAGCAAACCAATGTAATAAGATGTTGG
TCATGATATGATATAGGCAGCAAAATAAAAGTTTATCATCTTTATATATG
TACTAGTTTATGCACCCAAAAACAATGTCCTAGTTTTTCTTACCTTTCTT
TTGCAATTGAGAATTGGTTTATATTAGTGTATTAATTCTACAATGTGTGA
TGAATGTTCCTCA
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