GT626577
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT626577 vs. TrEMBL
Match: A5BD53_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014803 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.059e-15 Identity = 69/185 (37.30%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 1 MQQQNMLSSPHMSATALLQKAAQIG------------------SXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQF---------QNVEEN-KKMPQQNLAGNL--CFGGSDKLTLDFLGVGGMVRNMSGGFSQREHQLHSMSNMNNLDPKLESTQANQ 465 MQQ+N+ +PHMSATALLQKAAQ+G S + SN LRS ME+E +SI+G H N G F Q+ N K+ L +L GGSD+LTLDFLGVGG+VRN+ GGFSQRE + + M++LD ++++ A Q Sbjct: 117 MQQENL--APHMSATALLQKAAQMGPTTSSNSSSLLRGLGGSSSTGAKSDRQLLSSNFSSLRSQMENENHLQGLMNSLANGN--SSIFGGSGHAQENNFGGFNGRGITLEQQHKNTNFSKVDDAKLHQSLGVSMGGSDRLTLDFLGVGGVVRNVGGGFSQREQR--HVVEMSSLDSEIKTAAAAQ 295
BLAST of GT626577 vs. TrEMBL
Match: B9S7A9_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_0775740 PE=4 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.680e-11 Identity = 56/138 (40.58%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 28 PHMSATALLQKAAQIGSXXXXXXXX-----GVESNNEGLRSSM--------ESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMSGGFSQREHQ 402 PHMSATALLQKAAQ+GS G S++ G++S+ E++ +SI+G+ + G N+EE K Q L N GGSD+LT DFLGVG +VR+MSGGFSQRE Q Sbjct: 412 PHMSATALLQKAAQMGSTSSTYSASLLRSFGSSSSSTGMKSAAANFGEIFSENDQNNLHDLMNSFAATGNSSIFGHGQENPYGTSGG--NLEEAKM--HQGL--NASIGGSDRLTRDFLGVGQVVRSMSGGFSQREKQ 543
BLAST of GT626577 vs. TrEMBL
Match: C7SI20_THEHA (Putative C2H2 zinc finger protein OS=Thellungiella halophila PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 4.731e-8 Identity = 51/145 (35.17%), Postives = 65/145 (44.83%), Query Frame = 1 Query: 10 QNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAG----NLCFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQ 402 QN S+PHMSATALLQKAAQ+GS G +NN ++ S S M +N NL N N N+ G +GG +K +T DFLGVG +VR+M SGGF Q++ Q Sbjct: 430 QNPNSTPHMSATALLQKAAQMGSTSSNNSNNGSNNNNNNNNNNASS---------------ILRSFGSGMYGENESNLHDLMNSFSNPGATGDNVNGVDSPFGSYGGVNKGLNTDKQSMTRDFLGVGQIVRSMSGSGGFQQQQQQ 559
BLAST of GT626577 vs. TrEMBL
Match: D7LPZ3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904431 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.377e-7 Identity = 54/166 (32.53%), Postives = 71/166 (42.77%), Query Frame = 1 Query: 10 QNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNL--------CFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQLHSMSNMNNLDPKLEST 453 QN S+PHMSATALLQKAAQ+GS +NN S + S + IYG +N NL N N GN+ +GG +K +T DFLGVG +VR+M SGGF Q++ Q N ++ S+ Sbjct: 427 QNPNSAPHMSATALLQKAAQMGSTSSNNNNGSNNNNNNNASSILRS---------------FGSGIYG----ENESNLQDLMNSFSN-----PGATGNVNGVDSPFGSYGGVNKGLSADKQSMTRDFLGVGQIVRSMSGSGGFQQQQQQQQQQQQHGNSRERVGSS 568
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02070.1 (| Symbols: AtIDD5, IDD5 | indeterminate(ID)-domain 5 | chr2:505523-509154 FORWARD LENGTH=602) HSP 1 Score: 56.225 bits (134), Expect = 1.828e-8 Identity = 52/152 (34.21%), Postives = 67/152 (44.08%), Query Frame = 1 Query: 1 MQQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNNEGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNVEENKKMPQQNLAGNL--------CFGGSDK--------LTLDFLGVGGMVRNM--SGGFSQREHQ 402 MQ N S+PHMSATALLQKAAQ+GS +NN S + S + IYG +N NL N N GN+ +GG +K +T DFLGVG +V++M SGGF Q++ Q Sbjct: 426 MQSPN--SAPHMSATALLQKAAQMGSTSSNNNNGSNTNNNNNASSILRS---------------FGSGIYG----ENESNLQDLMNSFSN-----PGATGNVNGVDSPFGSYGGVNKGLSADKQSMTRDFLGVGQIVKSMSGSGGFQQQQQQ 551
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02080.2 (| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain 4 | chr2:518328-520619 REVERSE LENGTH=439) HSP 1 Score: 55.4546 bits (132), Expect = 3.118e-8 Identity = 56/171 (32.75%), Postives = 73/171 (42.69%), Query Frame = 1 Query: 4 QQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNN-----EGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNV--------EENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMS--GGFSQREHQLHSMSNMNNLDPKLESTQANQPF 471 +++N+ + ++SATALLQKA Q+GS V SN+ GL SS S M +DNN NL N + N GSDKLTLDFLGVGGMVRN++ GG R +S LD + + + N PF Sbjct: 289 REENLNAGSNVSATALLQKATQMGS---------VTSNDPSALFRGLASSSNSSSVIANHFGGGRI----------MENDNNGNLQGLMNSLAAVNGGGGSGGSIFDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVNRGGGGGGRGSARGGVS----LDGEAKFPEQNYPF 436
BLAST of GT626577 vs. TAIR peptide
Match: AT2G02080.1 (| Symbols: AtIDD4, IDD4 | indeterminate(ID)-domain 4 | chr2:518328-521170 REVERSE LENGTH=516) HSP 1 Score: 55.4546 bits (132), Expect = 3.118e-8 Identity = 56/171 (32.75%), Postives = 73/171 (42.69%), Query Frame = 1 Query: 4 QQQNMLSSPHMSATALLQKAAQIGSXXXXXXXXGVESNN-----EGLRSSMESEXXXXXXXXXXXXXXXXTSIYGNMNHDNNINLGQFQNV--------EENKKMPQQNLAGNLCFGGSDKLTLDFLGVGGMVRNMS--GGFSQREHQLHSMSNMNNLDPKLESTQANQPF 471 +++N+ + ++SATALLQKA Q+GS V SN+ GL SS S M +DNN NL N + N GSDKLTLDFLGVGGMVRN++ GG R +S LD + + + N PF Sbjct: 366 REENLNAGSNVSATALLQKATQMGS---------VTSNDPSALFRGLASSSNSSSVIANHFGGGRI----------MENDNNGNLQGLMNSLAAVNGGGGSGGSIFDVQFGDNGNMSGSDKLTLDFLGVGGMVRNVNRGGGGGGRGSARGGVS----LDGEAKFPEQNYPF 513 The following BLAST results are available for this feature:
BLAST of GT626577 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 4
BLAST of GT626577 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT626577 ID=GT626577; Name=GT626577; organism=Lens culinaris; type=EST; length=663bpback to top |