GT627336

EST Overview


Name	GT627336
Unique Name	GT627336
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	759

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT627336 vs. TrEMBL
Match: B9RLN2_RICCO (Replication factor A 1, rfa1, putative OS=Ricinus communis GN=RCOM_1469680 PE=4 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 5.833e-107
Identity = 189/252 (75.00%), Postives = 220/252 (87.30%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            QH N+AP ARMAMTRRV PLVSLNPY G+WTIKV VTSKG +RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFY+KF +GKVYY+SKGSLKVANKQF+TVQNDYEM L              F+PETKFNFVPIDQLGP+V+ ++LVDV+G+V++VS TMSIRRKSNN+ VPKRDITIADE+KKTVVVSLW DLAT++GQELLD  DKSPVVAIK++KVGDFQGVSLS + +S++ ++P+ PE++K
Sbjct:  160 QHKNMAPTARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQVEEASDEAAFIPETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADETKKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQVNPDTPESKK 411

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BLAST of GT627336 vs. TrEMBL
Match: D7SHZ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007849001 PE=4 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 9.950e-107
Identity = 189/252 (75.00%), Postives = 219/252 (86.90%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            QHGN+APAARMAMTRRV PLVSLNPY G+WTIKV +T+KG +RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKF +GKVYY+SKG+LKVANKQFKTVQNDYEMTL              F+PE KF FV I++LGP+VN  +LVDV+G+V++VS TMSIRRKSNN+ VPKRDITIAD++KKTVVVSLW D ATN+GQELLD  DK P+VAIKS+KVGDFQGVSLS +SKS+VL++P+ PE++K
Sbjct:  139 QHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKK 390

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BLAST of GT627336 vs. TrEMBL
Match: A6BLP0_IPONI (70 kDa subunit of replication protein A OS=Ipomoea nil GN=RPA70 PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 2.451e-105
Identity = 188/252 (74.60%), Postives = 219/252 (86.90%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q+GN+ P AR+AMTRR+ PLVSLNPY G WTIKV VTSKG +R YKNARGEGCVFNVEL D+DGT+IQATMFN+AARKFY+KF +GKVYY+SKG+L+VANKQFKTVQNDYEMTL              FVPETKFNFV ID+LG +VN  +LVDV+G+V+NVSSTMSIRRKSNNE +PKRDITIADE+KKTVVVSLW DLATN+GQELLD  DKSPVVAI+SVKVGDFQG+SLSAI++S VL++P++PEA+K
Sbjct:  141 QNGNIVPPARLAMTRRIHPLVSLNPYQGIWTIKVRVTSKGNMRFYKNARGEGCVFNVELADQDGTEIQATMFNQAARKFYDKFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEAINEAAFVPETKFNFVAIDELGSYVNGRELVDVIGVVQNVSSTMSIRRKSNNEMIPKRDITIADETKKTVVVSLWSDLATNVGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLVNPDMPEAKK 392

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BLAST of GT627336 vs. TrEMBL
Match: B9N060_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_783062 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 2.075e-104
Identity = 186/252 (73.81%), Postives = 216/252 (85.71%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            QHGN+APAARMAMTRRV PLVSLNPY G+WTIKV VTSKG +RTY+NARGEGCVFNVELTD DGTQIQATMFNEAA+KFY++F +GKVYY+SKG+L+VANKQFKTVQNDYEMTL               +PETKF FVPIDQLGP+VN  DLVDV+GIV++VS T SIRRKSNNETVPKRDI +ADE+KKTVVVSLW +LAT++GQEL D  DKSPVVAIKS+KVGDFQG+SLS + KS+V ++P + E++K
Sbjct:  141 QHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYRNARGEGCVFNVELTDGDGTQIQATMFNEAAKKFYDRFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEASDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTSIRRKSNNETVPKRDIVVADETKKTVVVSLWNELATSVGQELHDIADKSPVVAIKSLKVGDFQGISLSTLGKSIVQVNPVIAESEK 392

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BLAST of GT627336 vs. TrEMBL
Match: A5AJR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006284 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 2.075e-104
Identity = 189/261 (72.41%), Postives = 219/261 (83.91%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLV---------DVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            QHGN+APAARMAMTRRV PLVSLNPY G+WTIKV +T+KG +RTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKF +GKVYY+SKG+LKVANKQFKTVQNDYEMTL              F+PE KF FV I++LGP+VN  +LV         DV+G+V++VS TMSIRRKSNN+ VPKRDITIAD++KKTVVVSLW D ATN+GQELLD  DK P+VAIKS+KVGDFQGVSLS +SKS+VL++P+ PE++K
Sbjct:  162 QHGNMAPAARMAMTRRVHPLVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEASNEETFIPEAKFKFVEIEELGPYVNGKELVGPLTSLLIPDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKK 422

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BLAST of GT627336 vs. TrEMBL
Match: D7MUG5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496254 PE=4 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 2.710e-104
Identity = 186/252 (73.81%), Postives = 219/252 (86.90%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY G+WTIKV VT+KG +R YKNARGEGCVFNVELTDE+GTQIQATMFN+AARKFY++F +GKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F+PETKFNFVPI++LG +VN+ +L+D++G+V++VS TMSIRR+++NE +PKRDIT+ADESKKTVVVSLW DLAT IGQELLD  DKSPVVAIKS+KVGDFQGVSLS IS+S V+I+PE PEA+K
Sbjct:  167 QRGNAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKK 418

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BLAST of GT627336 vs. TrEMBL
Match: Q9SD82_ARATH (Replication factor A-like protein OS=Arabidopsis thaliana GN=F13G24.220 PE=4 SV=1)

HSP 1 Score: 379.022 bits (972), Expect = 2.294e-103
Identity = 187/252 (74.21%), Postives = 213/252 (84.52%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY GSWTIKV VT+KG +RTYKNARGEGCVFNVELTDE+GTQIQATMFN AARKFY++F MGKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F PETKFNFVPID+LG +VN+ DL+DV+G+V++VS TMSIRRK++NE +PKRDIT+ADE+KKTVVVSLW DLAT IGQELLD  D  PV+AIKS+KVG FQGVSLS IS+S V+I+P  PEA K
Sbjct:  141 QRGNAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATK 392

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BLAST of GT627336 vs. TrEMBL
Match: Q9FME0_ARATH (Putative RNA helicase OS=Arabidopsis thaliana GN=At5g61000 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 6.674e-103
Identity = 182/252 (72.22%), Postives = 219/252 (86.90%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY G+WTIKV VT+KG +R YKNARGEGCVFNVELTDE+GTQIQATMFN+AARKF+++F +GKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F+PETKFNFVPI++LG +VN+ +L+D++G+V++VS TMSIRR+++NE +PKRDIT+ADES+KTVVVSLW DLAT IGQELLD  D+SPV+AIKS+KVGDFQGVSLS IS+S V+I+PE PEA+K
Sbjct:  165 QRGNAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKK 416

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BLAST of GT627336 vs. TrEMBL
Match: D7M0P7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_325405 PE=4 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.942e-102
Identity = 185/252 (73.41%), Postives = 212/252 (84.13%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY GSWTI+V VT+KG +RTY NARGEGCVFNVELTDE+GTQIQATMFN AARKFY++F MGKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F PE KFNFVPID+LG +VN+ DL+DV+G+V+ VS TMSIRRK++NE +PKRDIT+ADESK TVVVSLW DLAT IGQELLD  D  PV+AIKS+KVGDFQGVSLS IS+S V+I+P+ PEA+K
Sbjct:  141 QRGNAAPAARMAMTRRVHPLVSLNPYQGSWTIRVRVTNKGVMRTYNNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPEIKFNFVPIDELGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRDITLADESKNTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSNVVINPDSPEAKK 392

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BLAST of GT627336 vs. TrEMBL
Match: Q10Q08_ORYSJ (Os03g0214100 protein OS=Oryza sativa subsp. japonica GN=Os03g0214100 PE=4 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 5.122e-95
Identity = 168/252 (66.67%), Postives = 207/252 (82.14%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAAR+AMTRRV PL+SLNPY G+W IKV VTSKG LRTYKNARGEGCVFNVELTD DGTQIQATMFNEAA+KFY  F +GKVYY+SKGSL+VANKQFKTV NDYEMTL              F+P+ ++NFV IDQLGP+V   +LVDV+G+V++VS T+S+RRK +NET+PKRDI +AD+S KTV +SLW DLAT  GQELLD VD +P++AIKS+KV DFQG+SLS + +S ++++P++PEA++
Sbjct:  170 QRGNAAPAARLAMTRRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQIQATMFNEAAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTL-NENAVVEEAEGETFIPQIQYNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQ 420

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BLAST of GT627336 vs. SwissProt
Match: RFA1_XENTR (Replication protein A 70 kDa DNA-binding subunit OS=Xenopus tropicalis GN=rpa1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.680e-50
Identity = 105/237 (44.30%), Postives = 146/237 (61.60%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SLNPY   WT++  VT+KG +RT+ N+RGEG +F++E+ DE G +I+AT FNE A KF+    + KVYY SKG+LK+ANKQ+ +V+NDYEMT                VP  +F FVPI +L    NK  ++D++GI KN      +  +SNN  V KR+I + D S K V  +LWG+ A            + PVVAIK  ++ DF G SLS +S S V+I+P++PEA K
Sbjct:  175 KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQADKFFSLIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSAD-VPMVQFEFVPIGEL-ESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTLWGEDADKFDG------SRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFK 402

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BLAST of GT627336 vs. SwissProt
Match: RFA1_XENLA (Replication protein A 70 kDa DNA-binding subunit OS=Xenopus laevis GN=rpa1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.827e-49
Identity = 105/237 (44.30%), Postives = 145/237 (61.18%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SLNPY   WT++  VT+KG +RT+ N+RGEG +F++E+ DE G +I+AT FNE A KF+    + KVYY SKG+LK+ANKQ+ +V+NDYEMT                VP  +F FV I +L    NK  ++D++G+ KNV     +  KSNN  V KR I + D S K V  +LWG+ A            + PVVAIK  ++ DF G SLS +S S V+I+P++PEA K
Sbjct:  174 KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSAD-VPMVQFEFVSIGEL-ESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIHLMDSSGKVVSTTLWGEDADKFDG------SRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFK 401

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BLAST of GT627336 vs. SwissProt
Match: RFA1_HUMAN (Replication protein A 70 kDa DNA-binding subunit OS=Homo sapiens GN=RPA1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.224e-46
Identity = 102/237 (43.04%), Postives = 140/237 (59.07%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SL PY   WTI   VT+K  +RT+ N+RGEG +F++EL DE G +I+AT FNE   KF+    + KVYY SKG+LK+ANKQF  V+NDYEMT                +P  +F+F  ID L  + +K  LVD++GI K+      I  +SNN  V KR+I + D S K V  +LWG+ A            + PV+AIK  +V DF G SLS +S S ++ +P++PEA K
Sbjct:  183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTF-NNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDG------SRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYK 410

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BLAST of GT627336 vs. SwissProt
Match: RFA1_MOUSE (Replication protein A 70 kDa DNA-binding subunit OS=Mus musculus GN=Rpa1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.211e-46
Identity = 103/237 (43.46%), Postives = 140/237 (59.07%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SL PY   WTI   VT+K  +RT+ N+RGEG +F++EL DE G +I+AT FNE   KF+    + KVYY SKG+LK+ANKQF  V+NDYEMT                +P  +F+F  I  L     K  LVD++GI K+   ++ I  KSNN  V KR+I + D S K V  +LWG+ A            + PV+AIK  +V DF G SLS +S S V+++P++PEA K
Sbjct:  192 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMTF-NNETSVLPCEDGHHLPTVQFDFTGIGDLESKA-KDALVDIIGICKSYEDSIKITVKSNNREVAKRNIYLMDMSGKVVTTTLWGEDADKFDG------SRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYK 419

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_PONAB (Replication protein A 70 kDa DNA-binding subunit OS=Pongo abelii GN=RPA1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.729e-45
Identity = 101/237 (42.62%), Postives = 139/237 (58.65%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SL PY   WTI   VT+K  +RT+ N+RGE  +F++EL DE G +I+AT FNE   KF+    + KVYY SKG+LK+ANKQF  V+NDYEMT                +P  +F+F  ID L  + +K  LVD++GI K+      I  +SNN  V KR+I + D S K V  +LWG+ A            + PV+AIK  +V DF G SLS +S S ++ +P++PEA K
Sbjct:  183 KVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTF-NNETSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDG------SRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYK 410

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_CHICK (Replication protein A 70 kDa DNA-binding subunit OS=Gallus gallus GN=RPA1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.656e-45
Identity = 100/237 (42.19%), Postives = 140/237 (59.07%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SLNPY   WTI   VT KG +RT+ N+RGEG +F++EL DE G +I+AT FN+ A KF+    + KVYY +KG+LK ANKQ+  V+NDYE+T                +P  +F+FV I  L  +  K  +VDV+GI K+      I  K++N  V KR++ + D S K V  +LWG+ A            + PV+AIK  +V DF G SLS +S S V+++P+ PEA K
Sbjct:  180 KVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITF-NNETSVVPCDDAQHLPSVQFDFVSISDL-ENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATLWGNEAEKFDG------SRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFK 407

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_DANRE (Replication protein A 70 kDa DNA-binding subunit OS=Danio rerio GN=rpa1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.555e-43
Identity = 99/239 (41.42%), Postives = 145/239 (60.67%), Query Frame = 2

Query:   47 RVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKS--PVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            +V P+ SLNPY   WTI+  VT+K A+RT+ N+RG+G +F++EL DE G +I+AT FN    KF+     GKV+Y+SKG+LK+ANKQF +++NDYEMTL               VP  + +FV I  L     K  ++DV+G+ KN      I  K++ E V KR+I + D S + + +++WG  A        +T D S  P++AIK  ++ DF G SLS +  S V+I+P++PEA K
Sbjct:  170 KVVPIASLNPYQSKWTIRARVTNKSAIRTWSNSRGDGKLFSMELVDESG-EIRATGFNNEVDKFFSLIEQGKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPCEDSND-VPMLQCDFVSIADLESR-EKDTILDVIGVCKNAEDVARIMTKNSRE-VSKRNIQLIDMSGRVIQLTMWGSDA--------ETFDGSGQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYK 396

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_DROME (Replication protein A 70 kDa DNA-binding subunit OS=Drosophila melanogaster GN=RpA-70 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.327e-41
Identity = 94/236 (39.83%), Postives = 133/236 (56.36%), Query Frame = 2

Query:   56 PLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXF-VPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQ-GVSLSAISKSLVLIDPEVPEAQK 757
            P+ SL+PY   W IK  VTSK  +RT+ NARGEG +F+++L DE G +I+AT F E   KFY+   +  VYY+SK  LK ANKQ+ ++ N YEMT                 +PE K+N VPI  +    NK+  VD +GI K V    S   ++ N+   KRDIT+ D S   + ++LWGD A N    +       PV+ +K  ++ +F  G SLS    S++ I+P++PEA K
Sbjct:  168 PISSLSPYQNKWVIKARVTSKSGIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPANKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSGMENKA-AVDTIGICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV------QPVILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHK 395

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_SCHPO (Replication factor A protein 1 OS=Schizosaccharomyces pombe GN=ssb1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.238e-39
Identity = 88/244 (36.07%), Postives = 141/244 (57.79%), Query Frame = 2

Query:   20 PAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEA 751
            PAA  +++  + P+  L+PY   WTI+  VT+K  ++ + N RGEG +F+V L DE G +I+AT FN+    FY+    G VYY+S+  + +A KQ+  VQN+YE+ +               VP  KF+FV + ++G  V K  ++DV+G+++NV     I  ++ +    KRDITI D++   + V+LWG  A         +V +  ++A K VKV DFQG SLS ++ S + +DP++ E+
Sbjct:  169 PAAPNSLSTIIYPIEGLSPYQNKWTIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESG-EIRATGFNDQVDAFYDILQEGSVYYISRCRVNIAKKQYTNVQNEYEL-MFERDTEIRKAEDQTAVPVAKFSFVSLQEVG-DVAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQTGYEMRVTLWGKTAIEF------SVSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDIQES 403

[Close]

BLAST of GT627336 vs. SwissProt
Match: RFA1_YEAST (Replication factor A protein 1 OS=Saccharomyces cerevisiae GN=RFA1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.307e-34
Identity = 91/239 (38.08%), Postives = 133/239 (55.65%), Query Frame = 2

Query:   41 TRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQL-GPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLD-TVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEA 751
            TR +  +  L+PY   WTIK  V+ KG ++T+ N RG+G +FNV   D  G +I+AT FN+ A KF E    GKVYYVSK  L+ A  QF  + + YE+ L               VP+T FNF+ +D +    VN +  VDV+GI++ ++    +  ++  +   +RDITI D+S  ++ V LW        Q+ LD  + +  V AIK V+V DF G SLS    S ++ +PE+PEA
Sbjct:  181 TRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVIEECFDESN-VPKTHFNFIKLDAIQNQEVNSN--VDVLGIIQTINPHFELTSRAGKK-FDRRDITIVDDSGFSISVGLW-------NQQALDFNLPEGSVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEA 407

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT5G08020.1 (| Symbols: ATRPA70B, RPA70B | RPA70-kDa subunit B | chr5:2572107-2574879 FORWARD LENGTH=604)

HSP 1 Score: 379.022 bits (972), Expect = 1.507e-105
Identity = 187/252 (74.21%), Postives = 213/252 (84.52%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY GSWTIKV VT+KG +RTYKNARGEGCVFNVELTDE+GTQIQATMFN AARKFY++F MGKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F PETKFNFVPID+LG +VN+ DL+DV+G+V++VS TMSIRRK++NE +PKRDIT+ADE+KKTVVVSLW DLAT IGQELLD  D  PV+AIKS+KVG FQGVSLS IS+S V+I+P  PEA K
Sbjct:  141 QRGNAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATK 392

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT5G61000.1 (| Symbols: RPA70D, ATRPA70D | Replication factor-A protein 1-related | chr5:24549682-24552641 REVERSE LENGTH=629)

HSP 1 Score: 377.481 bits (968), Expect = 4.386e-105
Identity = 182/252 (72.22%), Postives = 219/252 (86.90%), Query Frame = 2

Query:    2 QHGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            Q GN APAARMAMTRRV PLVSLNPY G+WTIKV VT+KG +R YKNARGEGCVFNVELTDE+GTQIQATMFN+AARKF+++F +GKVYY+S+GSLK+ANKQFKTVQNDYEMTL              F+PETKFNFVPI++LG +VN+ +L+D++G+V++VS TMSIRR+++NE +PKRDIT+ADES+KTVVVSLW DLAT IGQELLD  D+SPV+AIKS+KVGDFQGVSLS IS+S V+I+PE PEA+K
Sbjct:  165 QRGNAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKK 416

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT4G19130.1 (| Symbols: | Replication factor-A protein 1-related | chr4:10466618-10469092 REVERSE LENGTH=784)

HSP 1 Score: 187.193 bits (474), Expect = 8.406e-48
Identity = 99/253 (39.13%), Postives = 148/253 (58.50%), Query Frame = 2

Query:    5 HGNLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKS--PVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            + N  P AR     ++ P+ +L+PY G WTIK  VT+K AL+ Y N RGEG VFN +L D DG +I+ T FN  A +FY++ V+G +Y +S+GSL+ A K F  ++NDYE+ L               +P  +F+F  I  +    N   +VDV+GIV ++S T++I RK N    PKR + + D S ++V V++WGD     GQ L    D    PV+A+K+ ++ +F G ++S I  S + IDP+  EA+K
Sbjct:  213 YANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESMENNC-IVDVIGIVSSISPTVTITRK-NGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEK 463

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT2G06510.1 (| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replication protein A 1A | chr2:2585215-2587601 FORWARD LENGTH=640)

HSP 1 Score: 185.267 bits (469), Expect = 3.194e-47
Identity = 99/251 (39.44%), Postives = 151/251 (60.16%), Query Frame = 2

Query:   11 NLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKS--PVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            N  P  +     RV P+ +LNPY G W IK  VT+KG +R Y NA+G+G VF+ +L D DG +I+ T FN    +FY+   +GKVY +SKGSLK A K F  ++N++E+ L               +P+ +F+F PI  +  +   + ++DV+G+V +V+ ++ I RK+  ET  +R + + DES K V V+LWG+     G++L + VD +  PV+AIK+ KV DF G S+  IS + + I+P+ PEA K
Sbjct:  184 NHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHK 432

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT2G06510.2 (| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A | replication protein A 1A | chr2:2585215-2587601 FORWARD LENGTH=617)

HSP 1 Score: 185.267 bits (469), Expect = 3.194e-47
Identity = 99/251 (39.44%), Postives = 151/251 (60.16%), Query Frame = 2

Query:   11 NLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKS--PVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            N  P  +     RV P+ +LNPY G W IK  VT+KG +R Y NA+G+G VF+ +L D DG +I+ T FN    +FY+   +GKVY +SKGSLK A K F  ++N++E+ L               +P+ +F+F PI  +  +   + ++DV+G+V +V+ ++ I RK+  ET  +R + + DES K V V+LWG+     G++L + VD +  PV+AIK+ KV DF G S+  IS + + I+P+ PEA K
Sbjct:  161 NHGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHK 409

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT5G45400.1 (| Symbols: RPA70C, ATRPA70C | Replication factor-A protein 1-related | chr5:18398990-18401644 FORWARD LENGTH=853)

HSP 1 Score: 181.415 bits (459), Expect = 4.613e-46
Identity = 98/251 (39.04%), Postives = 149/251 (59.36%), Query Frame = 2

Query:   11 NLAPAARMAMTRRVRPLVSLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKS--PVVAIKSVKVGDFQGVSLSAISKSLVLIDPEVPEAQK 757
            N  P AR     R+ P+ +LNPY G WTIKV VTSK  LR + N RGEG +F+ +L D DG +I+ T FN+A  +F++K V+G VY +S+G+LK A K F  + NDYE+ L               +P   F+F  I  +  ++  +   DV+GIV ++S T++I RK+  E V KR + + D S ++V V++WG+     GQ+L +  D    PV+A+K+ ++G+F G  +S I  S   I+P+ PEA++
Sbjct:  286 NRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCEDDGT-IPRYHFHFRNIGDI-ENMENNSTTDVIGIVSSISPTVAIMRKNLTE-VQKRSLQLKDMSGRSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARE 533

[Close]

BLAST of GT627336 vs. TAIR peptide
Match: AT1G52950.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:19725483-19728007 FORWARD LENGTH=566)

HSP 1 Score: 57.3806 bits (137), Expect = 1.005e-8
Identity = 55/233 (23.61%), Postives = 101/233 (43.35%), Query Frame = 2

Query:   65 SLNPYMGSWTIKVSVTSKGALRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYEKFVMGKVYYVSKGSLKVANKQFKTVQNDYEMTLXXXXXXXXXXXXXXFVPETKFNFVPIDQLGPHVNKSDLVDVVGIVKNVSSTMSIRRKSNNETVPKRDITIADESKKTVVVSLWGDLATNIGQELLDTVDKSPVVAIKSVKVGDFQGV-SLS-AISKSLVLIDPEVPEAQK 757
            +L P+  SW I+V +    A   Y   +G G  + + L DEDG +IQA +  E   K      +G    + + S+  A+  +++  + Y + +               +     NF   D L   ++++ LV+V+G + NV     +      +   K D  + D     +  SLWG  A  I +   ++V    +  I+  K+G ++ + S+S A   S V I+P + E ++
Sbjct:   12 NLKPFKTSWCIQVKILH--AWNHY--TKGSGMSYEMMLADEDGNKIQAGIKKEHLLKLQRYVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQSSTRFSNSPTISDEIWLDLVNF--NDVLSGTLDQNKLVNVIGQLVNVGEIQLL--DVQGKPTKKIDFQLRDTDDNRLPCSLWGKFADQIHKVSKESVGGIVICLIRWAKLGHYKEIRSISNAFDASEVFINPILTEVEE 236

The following BLAST results are available for this feature:

BLAST of GT627336 vs. TrEMBL
BLAST of GT627336 vs. SwissProt
BLAST of GT627336 vs. TAIR peptide

BLAST of GT627336 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RLN2_RICCO	5.833e-107	75.00	Replication factor A 1, rfa1, putative OS=Ricinus ...	[more]
D7SHZ9_VITVI	9.950e-107	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
A6BLP0_IPONI	2.451e-105	74.60	70 kDa subunit of replication protein A OS=Ipomoea...	[more]
B9N060_POPTR	2.075e-104	73.81	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5AJR8_VITVI	2.075e-104	72.41	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7MUG5_ARALY	2.710e-104	73.81	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9SD82_ARATH	2.294e-103	74.21	Replication factor A-like protein OS=Arabidopsis t...	[more]
Q9FME0_ARATH	6.674e-103	72.22	Putative RNA helicase OS=Arabidopsis thaliana GN=A...	[more]
D7M0P7_ARALY	1.942e-102	73.41	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q10Q08_ORYSJ	5.122e-95	66.67	Os03g0214100 protein OS=Oryza sativa subsp. japoni...	[more]

BLAST of GT627336 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RFA1_XENTR	3.680e-50	44.30	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_XENLA	1.827e-49	44.30	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_HUMAN	3.224e-46	43.04	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_MOUSE	4.211e-46	43.46	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_PONAB	2.729e-45	42.62	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_CHICK	4.656e-45	42.19	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_DANRE	2.555e-43	41.42	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_DROME	5.327e-41	39.83	Replication protein A 70 kDa DNA-binding subunit O...	[more]
RFA1_SCHPO	2.238e-39	36.07	Replication factor A protein 1 OS=Schizosaccharomy...	[more]
RFA1_YEAST	6.307e-34	38.08	Replication factor A protein 1 OS=Saccharomyces ce...	[more]

BLAST of GT627336 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT5G08020.1	1.507e-105	74.21	\| Symbols: ATRPA70B, RPA70B \| RPA70-kDa subunit B ...	[more]
AT5G61000.1	4.386e-105	72.22	\| Symbols: RPA70D, ATRPA70D \| Replication factor-A...	[more]
AT4G19130.1	8.406e-48	39.13	\| Symbols: \| Replication factor-A protein 1-relat...	[more]
AT2G06510.1	3.194e-47	39.44	\| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A \| repl...	[more]
AT2G06510.2	3.194e-47	39.44	\| Symbols: ATRPA1A, RPA1A, RPA70A, ATRPA70A \| repl...	[more]
AT5G45400.1	4.613e-46	39.04	\| Symbols: RPA70C, ATRPA70C \| Replication factor-A...	[more]
AT1G52950.1	1.005e-8	23.61	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004365	Nucleic acid binding, OB-fold, tRNA/helicase-type	PFAM	PF01336	tRNA_anti	coord: 30..116 score: 2.7
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 19..122 score: 3.2e-33coord: 133..252 score: 8.5
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 134..252 score: 3.8e-29coord: 14..131 score: 1.3
None	No IPR available	PANTHER	PTHR23273	REPLICATION FACTOR A 1, RFA1	coord: 8..252 score: 2.1
None	No IPR available	SEG	seg	seg	coord: 115..128 score
None	No IPR available	SEG	seg	seg	coord: 45..53 score
None	No IPR available	SEG	seg	seg	coord: 6..25 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT627336 ID=GT627336; Name=GT627336; organism=Lens culinaris; type=EST; length=759bp
GCAACATGGAAATTTGGCTCCTGCTGCTAGAATGGCTATGACGCGTAGGG
TGCGTCCTCTTGTTTCTTTGAATCCTTATATGGGTAGTTGGACAATCAAG
GTCAGTGTTACAAGCAAAGGTGCCTTGCGTACATATAAGAATGCTAGAGG
AGAAGGATGTGTATTCAATGTTGAATTAACTGATGAAGATGGCACTCAGA
TTCAAGCAACAATGTTTAATGAGGCGGCAAGGAAGTTTTATGAGAAGTTT
GTTATGGGAAAGGTTTATTATGTTTCAAAAGGATCTTTGAAAGTTGCTAA
CAAACAGTTCAAAACAGTGCAAAATGATTATGAAATGACATTGAATGAAA
ATTCTGAGGTGGAAGAGGTTGCTAGTGAAGCTAGTTTTGTTCCAGAGACA
AAATTCAATTTTGTCCCAATTGATCAGTTAGGTCCTCATGTCAATAAGTC
TGATCTCGTTGATGTTGTTGGAATTGTTAAGAATGTGTCTTCAACAATGA
GCATTCGAAGGAAGAGCAACAATGAGACTGTTCCCAAGCGTGACATTACT
ATTGCGGATGAAAGCAAAAAGACAGTTGTTGTGTCTTTGTGGGGTGATCT
TGCAACCAACATAGGACAGGAGTTACTGGACACAGTTGACAAATCTCCAG
TAGTTGCAATAAAATCTGTGAAGGTTGGAGACTTTCAAGGTGTTTCTTTG
TCAGCTATAAGCAAAAGTTTGGTCCTGATTGATCCTGAAGTACCTGAAGC
TCAGAAGCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR004365	NA-bd_OB_tRNA
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like

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