GT619031

EST Overview
NameGT619031
Unique NameGT619031
TypeEST
OrganismLens culinaris (lentil)
Sequence length786
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT619031 vs. TrEMBL
Match: Q45NM5_MEDSA (Putative uncharacterized protein (Fragment) OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 1.016e-56
Identity = 109/131 (83.21%), Postives = 123/131 (93.89%), Query Frame = 2
Query:   62 TFRIFDMADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            +F++  MA+ K GLRKP FTKVDQLRPGTSGHT+TVKVV+TKMVMQ+GRPDGPQ RQMRIAESLVGDETG+II TARNDQVDL+K+GSTIILRNAKIDMFKGSMRLAVD+WGR+EVT+PA F+VKEDNNLS
Sbjct:   23 SFQVKIMAEAKPGLRKPTFTKVDQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLS 153          
BLAST of GT619031 vs. TrEMBL
Match: D7TDE2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013724001 PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 8.604e-56
Identity = 106/125 (84.80%), Postives = 119/125 (95.20%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MA+ K GLRKPVFTK++QLRPGTSGHT+TVKVV +KMV+Q+GRPDGPQ RQMRIAE LVGDETG+II TARNDQVDLMKEGST++LRNAKIDMFKGSMRLAVD+WGR+EVTEPA+FSVKEDNNLS
Sbjct:    1 MAESKSGLRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: B7FKB1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.124e-55
Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MA+ K GLRKP FTKV+QLRPGTSGHT+TVKVV+TKMVMQ+GRPDGPQ RQMRIAESLVGDETG+II TARNDQVDL+K+GSTIILRNAKIDMFKGSMRLAVD+WGR+EVT+PA F+VKEDNNLS
Sbjct:    1 MAEAKPGLRKPTFTKVEQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: C6T2Y3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.468e-55
Identity = 107/125 (85.60%), Postives = 117/125 (93.60%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MAD K GLRKPVFTKVDQLRPGTSGHT+TVKVVD KMVMQ+GR DGPQSRQMRIAE LVGDETG+II TARNDQVD+MKEG+T+ LRNAKIDMFKGSMRLA D+WGR+EVTEPA+F+VKEDNNLS
Sbjct:    1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVDAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDMMKEGATVTLRNAKIDMFKGSMRLAADKWGRVEVTEPASFTVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: C6SXP0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.503e-55
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MAD K GLRKPVFTKVDQLRPGTSGHT+TVKVV+ KMVMQ+GR DGPQSRQMRIAE LVGDETG+II TARNDQVD+MKE +T+ILRNAKIDMFKGSMRLAVD+WGR+EVTEPA+F+VKEDNNLS
Sbjct:    1 MADSKAGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDMMKEAATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: A5C3Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018558 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.269e-55
Identity = 105/125 (84.00%), Postives = 118/125 (94.40%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MA+ K GLRKPVFTK++QLRPGT GHT+TVKVV +KMV+Q+GRPDGPQ RQMRIAE LVGDETG+II TARNDQVDLMKEGST++LRNAKIDMFKGSMRLAVD+WGR+EVTEPA+FSVKEDNNLS
Sbjct:    1 MAESKSGLRKPVFTKIEQLRPGTXGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: C6T0P8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.615e-54
Identity = 106/125 (84.80%), Postives = 116/125 (92.80%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MAD K GLRKPVFTKVDQL PGTSGHT+TVKVV+ KMVMQRGR DGPQSRQMRIAE LVGDETG+II TARNDQVD M EG+T+ILRNAKIDMFKGSMRLAVD+WGR+E+TEPA+F+VKEDNNLS
Sbjct:    1 MADSKSGLRKPVFTKVDQLCPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDTMTEGATVILRNAKIDMFKGSMRLAVDKWGRVELTEPASFTVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: C6SXG4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 6.166e-54
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MAD K GLRKPVF KVDQLRPGTSGHT+TVKVV+ KMVMQRGR DGPQSRQM+IAE LVGDETG+II TARNDQVD M EG+T+ILRNAKIDMFKGSMRLAVD+WGR+E+TEPA+F+VKEDNNLS
Sbjct:    1 MADSKSGLRKPVFIKVDQLRPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMQIAECLVGDETGMIIFTARNDQVDTMTEGATVILRNAKIDMFKGSMRLAVDKWGRVELTEPASFTVKEDNNLS 125          
BLAST of GT619031 vs. TrEMBL
Match: B9SHB1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0528470 PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.997e-53
Identity = 103/120 (85.83%), Postives = 114/120 (95.00%), Query Frame = 2
Query:   95 QGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            +GLRKPVFTKV+QLRPGTSGHT+TVKVV TKMV+Q+GR DGPQ RQMRIAE LVGDETG+II TARNDQVDLMKEGST+ LRNAKIDMFKGSMRLAVD+WGR+EVTEPA+F+VKEDNNLS
Sbjct:    5 KGLRKPVFTKVEQLRPGTSGHTLTVKVVSTKMVLQKGRADGPQIRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLS 124          
BLAST of GT619031 vs. TrEMBL
Match: B9HU68_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833483 PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.220e-53
Identity = 103/125 (82.40%), Postives = 115/125 (92.00%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MA+ K GLRKPVFTKV+QLRPGT GHT+TVKVV  KMV+Q+GR DGPQ RQM+IAE LVGDETG+II TARNDQVDLM+EG+T+ILRNAKIDMFKGSMRLAVDRWGR+EVTEPA F+VKEDNNLS
Sbjct:    1 MAESKPGLRKPVFTKVEQLRPGTGGHTLTVKVVSAKMVLQKGRADGPQVRQMKIAECLVGDETGLIIFTARNDQVDLMQEGTTVILRNAKIDMFKGSMRLAVDRWGRVEVTEPADFTVKEDNNLS 125          
BLAST of GT619031 vs. SwissProt
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.882e-37
Identity = 77/123 (62.60%), Postives = 96/123 (78.05%), Query Frame = 2
Query:  104 RKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQS------RQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            RKPVF KV+QL+PGT+GHT+TVKV++  +V+   R   P S      +  RI E L+GDETG I+ TARNDQVDLMK G+T+ILRN++IDMFKG+MRL VD+WGRIE T  A+F+VKEDNNLS
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLS 140          
BLAST of GT619031 vs. TAIR peptide
Match: AT1G23750.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:8400638-8401171 FORWARD LENGTH=137)

HSP 1 Score: 203.371 bits (516), Expect = 1.200e-52
Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 2
Query:   80 MAD-LKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            MAD  K GL+KP FTKVDQLRPGTSGH + VK+V TKMV+Q+GR DGPQ+RQ+RI+E +VGDETGVI+ TARNDQVDLMKEGST+ LRNAKIDM+KGSMRLAVD+WGR+EVTEPA+F VKED N+S
Sbjct:    1 MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTNMS 126          
BLAST of GT619031 vs. TAIR peptide
Match: AT1G10590.3 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:3502324-3503033 REVERSE LENGTH=153)

HSP 1 Score: 192.971 bits (489), Expect = 1.622e-49
Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 2
Query:   71 IFDMADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRG--RPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVT-EPATFSVKEDNNLS 454
            +  MA+    LRKPVFTKV++LRPGT+GH++ VKVV+TKMVMQRG  RP GPQSRQMRIAE LVGDETG+II TARNDQVD+MKEGS + LRNAKIDM+KGSMRLAVDRWGR+EV  EP   +VK+DNNLS
Sbjct:   12 VIKMAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLS 142          
BLAST of GT619031 vs. TAIR peptide
Match: AT1G10590.2 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:3502324-3502991 REVERSE LENGTH=139)

HSP 1 Score: 192.2 bits (487), Expect = 2.766e-49
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRG--RPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVT-EPATFSVKEDNNLS 454
            MA+    LRKPVFTKV++LRPGT+GH++ VKVV+TKMVMQRG  RP GPQSRQMRIAE LVGDETG+II TARNDQVD+MKEGS + LRNAKIDM+KGSMRLAVDRWGR+EV  EP   +VK+DNNLS
Sbjct:    1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLS 128          
BLAST of GT619031 vs. TAIR peptide
Match: AT1G10590.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:3502324-3502991 REVERSE LENGTH=139)

HSP 1 Score: 192.2 bits (487), Expect = 2.766e-49
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 2
Query:   80 MADLKQGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRG--RPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVT-EPATFSVKEDNNLS 454
            MA+    LRKPVFTKV++LRPGT+GH++ VKVV+TKMVMQRG  RP GPQSRQMRIAE LVGDETG+II TARNDQVD+MKEGS + LRNAKIDM+KGSMRLAVDRWGR+EV  EP   +VK+DNNLS
Sbjct:    1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLVGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLS 128          
BLAST of GT619031 vs. TAIR peptide
Match: AT2G33845.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:14317781-14318712 FORWARD LENGTH=182)

HSP 1 Score: 163.696 bits (413), Expect = 1.053e-40
Identity = 84/121 (69.42%), Postives = 95/121 (78.51%), Query Frame = 2
Query:   95 QGLRKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQR-GRPDGPQSRQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            Q  +KPVF KVDQL+PGTSGHT+TVKVVD   V Q+ G       R  RI+E LVGDET  I+ TARNDQV+LMK G+T+ LRNAKIDMFKGSMRLAVD+WGRIE TEPA  +VKEDNNLS
Sbjct:   50 QEKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLS 170          
BLAST of GT619031 vs. TAIR peptide
Match: AT4G28440.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr4:14060054-14060970 FORWARD LENGTH=153)

HSP 1 Score: 155.606 bits (392), Expect = 2.869e-38
Identity = 77/123 (62.60%), Postives = 96/123 (78.05%), Query Frame = 2
Query:  104 RKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQS------RQMRIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            RKPVF KV+QL+PGT+GHT+TVKV++  +V+   R   P S      +  RI E L+GDETG I+ TARNDQVDLMK G+T+ILRN++IDMFKG+MRL VD+WGRIE T  A+F+VKEDNNLS
Sbjct:   18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLS 140          
BLAST of GT619031 vs. TAIR peptide
Match: AT1G03810.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr1:958759-959609 FORWARD LENGTH=143)

HSP 1 Score: 147.517 bits (371), Expect = 7.813e-36
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 2
Query:  104 RKPVFTKVDQLRPGTSGHTITVKVVDTKMVMQRGRPDGPQSRQM---RIAESLVGDETGVIIVTARNDQVDLMKEGSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPATFSVKEDNNLS 454
            RKPVF KVDQL+PGTSGHT+ VKV+++  V    R      + +   RIAE L+GD+TG I+ TARNDQVDLMK G+T+ILRNAKID+FK +MR+AVDRWGRIE+T P +F V   NNLS
Sbjct:   15 RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGCILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLS 134          
The following BLAST results are available for this feature:
BLAST of GT619031 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q45NM5_MEDSA1.016e-5683.21Putative uncharacterized protein (Fragment) OS=Med... [more]
D7TDE2_VITVI8.604e-5684.80Whole genome shotgun sequence of line PN40024, sca... [more]
B7FKB1_MEDTR1.124e-5585.60Putative uncharacterized protein OS=Medicago trunc... [more]
C6T2Y3_SOYBN1.468e-5585.60Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXP0_SOYBN2.503e-5585.60Putative uncharacterized protein OS=Glycine max PE... [more]
A5C3Z4_VITVI3.269e-5584.00Putative uncharacterized protein OS=Vitis vinifera... [more]
C6T0P8_SOYBN3.615e-5484.80Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXG4_SOYBN6.166e-5484.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9SHB1_RICCO3.997e-5385.83Putative uncharacterized protein OS=Ricinus commun... [more]
B9HU68_POPTR5.220e-5382.40Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GT619031 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH2.882e-3762.60Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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BLAST of GT619031 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 7
Match NameE-valueIdentityDescription
AT1G23750.11.200e-5276.98| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT1G10590.31.622e-4974.05| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT1G10590.22.766e-4975.78| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT1G10590.12.766e-4975.78| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT2G33845.11.053e-4069.42| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT4G28440.12.869e-3862.60| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
AT1G03810.17.813e-3661.67| Symbols: | Nucleic acid-binding, OB-fold-like p... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140no descriptioncoord: 39..158
score: 3.9
IPR016027Nucleic acid-binding, OB-fold-likeSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..162
score: 6.8
NoneNo IPR availableSEGsegsegcoord: 1..13
score
NoneNo IPR availableSEGsegsegcoord: 2..9
score
NoneNo IPR availableSEGsegsegcoord: 20..31
score
NoneNo IPR availableSEGsegsegcoord: 56..68
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619031 ID=GT619031; Name=GT619031; organism=Lens culinaris; type=EST; length=786bp
CTCACACTTTAGCTTTTTAGTTTCATCTCTTCTCTCTCACACCCAATTTC
ATTTCTGCTTTACTTTCAGGATTTTTGATATGGCTGATTTGAAACAAGGA
TTGAGGAAGCCGGTGTTTACTAAGGTTGATCAGCTTCGCCCTGGGACCAG
CGGACACACCATAACTGTGAAGGTTGTTGATACTAAGATGGTGATGCAGA
GAGGTCGTCCTGATGGACCTCAATCTCGTCAAATGCGAATTGCTGAGAGT
TTGGTAGGGGATGAGACTGGAGTTATTATAGTTACTGCAAGAAATGATCA
GGTGGATTTGATGAAAGAAGGTTCCACTATCATCCTGCGTAATGCTAAGA
TTGACATGTTCAAAGGCTCAATGAGACTCGCCGTGGACAGATGGGGCCGT
ATTGAAGTCACAGAACCAGCTACCTTCTCTGTCAAGGAAGATAATAACTT
GTCTCTGATTGAGTATGAACTGGTGAATGTTGTTGTTGAATGACTTGGTC
TGAGCATATTGAAAAGTTCAAATGAAGAATAAATACAATCAAGCAAAGCA
ATCTACTTTTGTCTATGGGAAATTACGACCATGCTCATCCAAGTTCATCT
TACTAGAAATATATTTTTGTTCAGCCATTAGTACCAACAGTTGCTCTTAC
AGTTGCAAGTATCAGCTTCGACAGATCTTGTAGCCTTAACCACCCGAGAA
ACGGTGAATGTAAGTTGGAAAACAAATGAACTGGCTTCCGGATCATACAC
TTTGTTATGCTTATCTATATGTGAATTATGTTTATC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR016027Nucleic acid-binding, OB-fold-like