GT619462
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT619462 vs. TrEMBL
Match: Q0WS09_ARATH (Ribosomal protein S27 OS=Arabidopsis thaliana GN=At2g45710 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.081e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMC 58
BLAST of GT619462 vs. TrEMBL
Match: D7LS57_ARALY (ARS27A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486581 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.081e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMC 58
BLAST of GT619462 vs. TrEMBL
Match: D7MUU7_ARALY (Ribosomal protein S27 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917614 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: D7LD76_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_670538 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: C6SWV6_SOYBN (Ribosomal protein S27 OS=Glycine max PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: B9RG16_RICCO (Ribosomal protein S27 OS=Ricinus communis GN=RCOM_1300070 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: B7FN54_MEDTR (Ribosomal protein S27 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: B7FHA3_MEDTR (Ribosomal protein S27 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: A9PJL7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVSSHSQTVVVC 58
BLAST of GT619462 vs. TrEMBL
Match: A9P8F6_POPTR (Ribosomal protein S27 OS=Populus trichocarpa GN=POPTRDRAFT_800083 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.248e-10 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. SwissProt
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.602e-11 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMC 58
BLAST of GT619462 vs. SwissProt
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.010e-11 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. SwissProt
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.010e-11 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. SwissProt
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 6.645e-10 Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVL +DIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMC 58
BLAST of GT619462 vs. SwissProt
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 8.679e-10 Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLL+PP VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TAIR peptide
Match: AT2G45710.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr2:18831243-18831999 FORWARD LENGTH=84) HSP 1 Score: 68.5514 bits (166), Expect = 4.584e-12 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMC 58
BLAST of GT619462 vs. TAIR peptide
Match: AT3G61110.1 (| Symbols: ARS27A, RS27A | ribosomal protein S27 | chr3:22611710-22612632 FORWARD LENGTH=86) HSP 1 Score: 68.1662 bits (165), Expect = 5.987e-12 Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TAIR peptide
Match: AT5G47930.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr5:19406423-19407329 REVERSE LENGTH=84) HSP 1 Score: 64.3142 bits (155), Expect = 8.645e-11 Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLL+PP VQSPNSFFMDVKCQGCFN+ TV++C Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC 58
BLAST of GT619462 vs. TAIR peptide
Match: AT3G61111.1 (| Symbols: | Zinc-binding ribosomal protein family protein | chr3:22613230-22613919 REVERSE LENGTH=86) HSP 1 Score: 52.7582 bits (125), Expect = 2.603e-7 Identity = 28/58 (48.28%), Postives = 33/58 (56.90%), Query Frame = 1 Query: 46 MVLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNM*V-----PTVILC 204 MVLQNDIDLLNPPA V SPNS+FM V+C C N+ TV++C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVPSPNSYFMLVRCSDCINITTIFSHSQTVVVC 58 The following BLAST results are available for this feature:
BLAST of GT619462 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT619462 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 5
BLAST of GT619462 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT619462 ID=GT619462; Name=GT619462; organism=Lens culinaris; type=EST; length=782bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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