GT619516
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT619516 vs. TrEMBL
Match: B7FIF5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 3.989e-8 Identity = 27/33 (81.82%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 11 DDFIGTGKVQLNKVVTQGFDDSFWPLQTKSGRN 109 DDFIGTGKVQL+KV++QGFDDS WPLQTK+GR+ Sbjct: 89 DDFIGTGKVQLHKVLSQGFDDSAWPLQTKNGRH 121
BLAST of GT619516 vs. TrEMBL
Match: A9PEZ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_707343 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.161e-7 Identity = 25/35 (71.43%), Postives = 33/35 (94.29%), Query Frame = 2 Query: 2 LKFDDFIGTGKVQLNKVVTQGFDDSFWPLQTKSGR 106 L FDDFIG+GK+QL+KV++QGFDD+ WPLQ+K+GR Sbjct: 82 LTFDDFIGSGKIQLHKVLSQGFDDTTWPLQSKTGR 116
BLAST of GT619516 vs. TrEMBL
Match: D7UC14_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_180.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003176001 PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.980e-7 Identity = 24/36 (66.67%), Postives = 33/36 (91.67%), Query Frame = 2 Query: 2 LKFDDFIGTGKVQLNKVVTQGFDDSFWPLQTKSGRN 109 L +DDFIG+GK+QL KV++QG+DD+ WPLQTK+GR+ Sbjct: 82 LTYDDFIGSGKIQLQKVLSQGYDDTAWPLQTKTGRH 117
BLAST of GT619516 vs. TrEMBL
Match: B9HS42_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_649601 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.585e-7 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 2 Query: 2 LKFDDFIGTGKVQLNKVVTQGFDDSFWPLQTKSGR 106 L DDFIG GK+QL+KV++QGFDD+ WPLQTK+GR Sbjct: 82 LSLDDFIGKGKIQLHKVLSQGFDDTTWPLQTKTGR 116
BLAST of GT619516 vs. TrEMBL
Match: C4TPD9_NICBE (Putative uncharacterized protein NbSS52 OS=Nicotiana benthamiana GN=NbSS52 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.377e-7 Identity = 22/36 (61.11%), Postives = 34/36 (94.44%), Query Frame = 2 Query: 2 LKFDDFIGTGKVQLNKVVTQGFDDSFWPLQTKSGRN 109 + +DDFIG+GK+QL+KV++QG+DD+ WP+QTK+GR+ Sbjct: 83 ISYDDFIGSGKIQLHKVLSQGYDDTAWPIQTKTGRH 118 The following BLAST results are available for this feature:
BLAST of GT619516 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT619516 ID=GT619516; Name=GT619516; organism=Lens culinaris; type=EST; length=693bpback to top |