GT620750

EST Overview


Name	GT620750
Unique Name	GT620750
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	787

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT620750 vs. TrEMBL
Match: C6TDK5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 5.803e-60
Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1

Query:    1 EEAKKENSTSPLAFLSVVEVPNQAKSGMCLDTHINCQNNIDFQMKSKDIYTQCIIDIPTANGNSVSPESYEEGVESFKTGNSPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447
            EE +  N  SPLAFLS++EVPNQ K+ MCLD HINCQN IDFQMK++D+Y+QCI+DIP+ NGNSVSPESYEE VESFKTGNSPTSVL RESS K G KLMQSL +  NPRDK V+EKLHDLPSN+WRRYKR+ SFDSRKVALLFSILSS
Sbjct:   76 EENENANCASPLAFLSILEVPNQVKNTMCLDAHINCQNCIDFQMKNEDVYSQCIVDIPSVNGNSVSPESYEEAVESFKTGNSPTSVLWRESSFK-GGKLMQSLVNVGNPRDKAVSEKLHDLPSNRWRRYKRAASFDSRKVALLFSILSS 223

[Close]

BLAST of GT620750 vs. TrEMBL
Match: C6TEG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.521e-57
Identity = 112/149 (75.17%), Postives = 126/149 (84.56%), Query Frame = 1

Query:    1 EEAKKENSTSPLAFLSVVEVPNQAKSGMCLDTHINCQNNIDFQMKSKDIYTQCIIDIPTANGNSVSPESYEEGVESFKTGNSPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447
            EE +  N  SPL FLS++ VPNQ KS MCLD  INCQN IDFQMK++ +Y+QCIIDIP+ NGNSVSPESYEE VE FKTGNSPTSVL RESS K G KLMQSL + +NPRDKPV+EKLHDLPSN+WR+YKR+ SFDSRKVALLFSILSS
Sbjct:   76 EEDENANCASPLPFLSILGVPNQVKSPMCLDDPINCQNCIDFQMKNEGVYSQCIIDIPSVNGNSVSPESYEEAVEGFKTGNSPTSVLWRESSFKAG-KLMQSLVNVSNPRDKPVSEKLHDLPSNRWRKYKRAASFDSRKVALLFSILSS 223

[Close]

BLAST of GT620750 vs. TrEMBL
Match: C6TLL3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.414e-42
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            LAVEA TGVAWQDAGKVELVEG SY G  LPFSLTTLIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQLAEIKHSR
Sbjct:    8 LAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHSR 100

[Close]

BLAST of GT620750 vs. TrEMBL
Match: B9SLN2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0593190 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.557e-39
Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            LAVEA TGVAWQDAGKVELVEG SY G  LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKR+YPGG +FDPLGLA+DPE+KE LQLAEIKHSR
Sbjct:  162 LAVEALTGVAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGG-YFDPLGLASDPEKKENLQLAEIKHSR 253

[Close]

BLAST of GT620750 vs. TrEMBL
Match: A5C288_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010727 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.129e-38
Identity = 79/93 (84.95%), Postives = 84/93 (90.32%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            LAVE+ TGV WQDAGKVEL+EG SY G  LPFS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLA DPE+K  LQLAEIKH+R
Sbjct:  153 LAVESLTGVTWQDAGKVELIEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKAVLQLAEIKHAR 245

[Close]

BLAST of GT620750 vs. TrEMBL
Match: Q6Z411_ORYSJ (Chlorophyll a/b-binding protein OS=Oryza sativa subsp. japonica GN=P0567H04.14 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R
Sbjct:  154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246

[Close]

BLAST of GT620750 vs. TrEMBL
Match: O65217_ORYSA (Chlorophyll a/b-binding protein OS=Oryza sativa GN=RCABP69 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R
Sbjct:  154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246

[Close]

BLAST of GT620750 vs. TrEMBL
Match: A3BL40_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24721 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R
Sbjct:  131 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 223

[Close]

BLAST of GT620750 vs. TrEMBL
Match: A2YML1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26463 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R
Sbjct:  154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246

[Close]

BLAST of GT620750 vs. TrEMBL
Match: B9SQ36_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0644360 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.057e-37
Identity = 78/93 (83.87%), Postives = 82/93 (88.17%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L VE  TGV WQDAGKVELVEG SY G  LPFS+TTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGKFFDPLGLA DPE+K  LQLAEIKH+R
Sbjct:  151 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHAR 243

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.916e-37
Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +AVEA TG+AWQDAGKVELVEG SY G  LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPE+ + L+LAEIKHSR
Sbjct:  156 IAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSR 247

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.421e-37
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPE+  +LQLAEIKH+R
Sbjct:  155 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHAR 247

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.386e-37
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            + VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA+DP +K +LQLAEIKH+R
Sbjct:  152 ITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHAR 244

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.655e-24
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKE-RLQLAEIKHSR 785
            L  EA TGV+W +AGKVEL +G SY G SLPFS+T LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA++ EE+  RL+ AEIKH+R
Sbjct:  152 LVAEATTGVSWVEAGKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHAR 243

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.923e-10
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 3

Query:  576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +Y G  +P+ +L T++ IE L I + E QR  E DPEK+ YPGG  FDPLG + DP + E L+L EIK+ R
Sbjct:  127 TYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGA-FDPLGFSKDPAKFEELKLKEIKNGR 196

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.491e-9
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 3

Query:  576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +Y G  +P+ +L T++ IE L I ++E QR+ E D EK+ YPGG  FDPLG + DP + E L++ EIK+ R
Sbjct:  128 TYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPAKFEELKVKEIKNGR 197

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB5_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.811e-8
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3

Query:  576 SYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +YFG ++P +L   +  EV+++G  E+ R    LD E +L+PGG F DPLGLA DPE+   L++ EIK+ R
Sbjct:  161 NYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGR 230

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.672e-8
Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 3

Query:  516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785
            +A+TG+ W +AG           G   PFS  TL+  ++L++G++E +R  +  DP+ +                       YPGGKFFDPL LA          D ++ ERL+LAEIKH+R
Sbjct:  123 QAWTGIPWFEAGADP--------GAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHAR 236

[Close]

BLAST of GT620750 vs. SwissProt
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.822e-7
Identity = 39/122 (31.97%), Postives = 60/122 (49.18%), Query Frame = 3

Query:  516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785
            +A++G+ W +AG           G   PFS  TL+  +++++G++E +R  +  DP+ +                       YPGGKFFDPL LA          D E+ ERL++AEIKH+R
Sbjct:  118 QAWSGIPWFEAGADP--------GAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHAR 231

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT2G40100.1 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16747190 FORWARD LENGTH=276)

HSP 1 Score: 154.836 bits (390), Expect = 4.894e-38
Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +AVEA TG+AWQDAGKVELVEG SY G  LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPE+ + L+LAEIKHSR
Sbjct:  156 IAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSR 247

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT5G01530.1 (| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290)

HSP 1 Score: 154.451 bits (389), Expect = 6.391e-38
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            L+VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPE+  +LQLAEIKH+R
Sbjct:  155 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHAR 247

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT3G08940.2 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718665 FORWARD LENGTH=287)

HSP 1 Score: 154.066 bits (388), Expect = 8.347e-38
Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 3

Query:  507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            + VE  TGV WQDAGKVELV+G SY G  LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA+DP +K +LQLAEIKH+R
Sbjct:  152 ITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHAR 244

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT4G39900.1 (| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:18508569-18510289 REVERSE LENGTH=245)

HSP 1 Score: 90.8929 bits (224), Expect = 8.731e-19
Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 1

Query:   25 TSPLAFLSVVEVPNQAKSGMCLDTHINCQ---NNIDFQMKSKDIYTQCIIDIPTANGNS-VSPESYEEGVESFKTGN-SPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447
            TS    LS V+    +K+ M +D  +NCQ   N I+  +   D Y  C++DI    GN   +  S++E V S K+ +     VL R++SL                 DK ++E+ HD P+N+WRRYKR+ SFDSRK+ +LFSILSS
Sbjct:   88 TSHFTLLSFVKALLPSKNQMLIDAQLNCQKTQNRINVLLGGTDSYQSCVVDINVEKGNGGETVTSHDEVVASMKSESVHMQKVLQRQASLST---------------DKALSERCHDAPTNRWRRYKRAASFDSRKIVILFSILSS 218

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT3G54890.1 (| Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339706-20340922 REVERSE LENGTH=241)

HSP 1 Score: 67.781 bits (164), Expect = 7.867e-12
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3

Query:  576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +Y G  +P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG + DP++ E L++ EIK+ R
Sbjct:  127 TYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNGR 196

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT3G54890.4 (| Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339881-20340922 REVERSE LENGTH=213)

HSP 1 Score: 66.6254 bits (161), Expect = 1.753e-11
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3

Query:  576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +Y G  +P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG + DP++ E L++ EIK+ +
Sbjct:  127 TYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNGK 196

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT4G10340.1 (| Symbols: LHCB5 | light harvesting complex of photosystem II 5 | chr4:6408200-6409496 FORWARD LENGTH=280)

HSP 1 Score: 59.3066 bits (142), Expect = 2.798e-9
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3

Query:  576 SYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785
            +YFG ++P +L   +  EV+++G  E+ R    LD E +L+PGG F DPLGLA DPE+   L++ EIK+ R
Sbjct:  161 NYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGR 230

[Close]

BLAST of GT620750 vs. TAIR peptide
Match: AT1G15820.1 (| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258)

HSP 1 Score: 56.6102 bits (135), Expect = 1.814e-8
Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 3

Query:  516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785
            +A++GVAW +AG       P       PFS  +L+  ++L++G++E +R  +  +P+ +                       YPGG+FFDPLGLA          D E+ ERL+LAEIKHSR
Sbjct:  120 QAWSGVAWFEAGAQ-----PDAIA---PFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSR 233

The following BLAST results are available for this feature:

BLAST of GT620750 vs. TrEMBL
BLAST of GT620750 vs. SwissProt
BLAST of GT620750 vs. TAIR peptide

BLAST of GT620750 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TDK5_SOYBN	5.803e-60	77.18	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TEG6_SOYBN	3.521e-57	75.17	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TLL3_SOYBN	5.414e-42	91.40	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SLN2_RICCO	9.557e-39	88.17	Chlorophyll A/B binding protein, putative OS=Ricin...	[more]
A5C288_VITVI	2.129e-38	84.95	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q6Z411_ORYSJ	6.194e-38	82.80	Chlorophyll a/b-binding protein OS=Oryza sativa su...	[more]
O65217_ORYSA	6.194e-38	82.80	Chlorophyll a/b-binding protein OS=Oryza sativa GN...	[more]
A3BL40_ORYSJ	6.194e-38	82.80	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2YML1_ORYSI	6.194e-38	82.80	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9SQ36_RICCO	1.057e-37	83.87	Chlorophyll A/B binding protein, putative OS=Ricin...	[more]

BLAST of GT620750 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
CB4C_ARATH	4.916e-37	80.65	Chlorophyll a-b binding protein CP29.3, chloroplas...	[more]
CB4A_ARATH	6.421e-37	80.65	Chlorophyll a-b binding protein CP29.1, chloroplas...	[more]
CB4B_ARATH	8.386e-37	79.57	Chlorophyll a-b binding protein CP29.2, chloroplas...	[more]
CB29_CHLRE	3.655e-24	62.77	Chlorophyll a-b binding protein CP29 OS=Chlamydomo...	[more]
CB121_HORVU	3.923e-10	49.30	Chlorophyll a-b binding protein 1B-21, chloroplast...	[more]
CB11_SOLLC	1.491e-9	46.48	Chlorophyll a-b binding protein 6A, chloroplastic ...	[more]
CB5_ARATH	2.811e-8	45.07	Chlorophyll a-b binding protein CP26, chloroplasti...	[more]
CB4_SPIOL	3.672e-8	33.61	Chlorophyll a-b binding protein CP24, chloroplasti...	[more]
CB4A_SOLLC	1.822e-7	31.97	Chlorophyll a-b binding protein CP24 10A, chloropl...	[more]

BLAST of GT620750 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT2G40100.1	4.894e-38	80.65	\| Symbols: LHCB4.3 \| light harvesting complex phot...	[more]
AT5G01530.1	6.391e-38	80.65	\| Symbols: LHCB4.1 \| light harvesting complex phot...	[more]
AT3G08940.2	8.347e-38	79.57	\| Symbols: LHCB4.2 \| light harvesting complex phot...	[more]
AT4G39900.1	8.731e-19	38.36	\| Symbols: \| unknown protein; Has 30201 Blast hit...	[more]
AT3G54890.1	7.867e-12	47.89	\| Symbols: LHCA1 \| photosystem I light harvesting ...	[more]
AT3G54890.4	1.753e-11	46.48	\| Symbols: LHCA1 \| photosystem I light harvesting ...	[more]
AT4G10340.1	2.798e-9	45.07	\| Symbols: LHCB5 \| light harvesting complex of pho...	[more]
AT1G15820.1	1.814e-8	34.43	\| Symbols: LHCB6, CP24 \| light harvesting complex ...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 150..163 score
None	No IPR available	GENE3D	1.10.3460.10	no description	coord: 44..132 score: 2
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 40..132 score: 2.1
None	No IPR available	SEG	seg	seg	coord: 73..80 score: NAcoord: 90..101 score
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 40..132 score: 7.5
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 44..132 score: 4.3

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT620750 ID=GT620750; Name=GT620750; organism=Lens culinaris; type=EST; length=787bp
GAAGAAGCTAAAAAGGAGAACAGTACTTCACCACTAGCCTTCCTAAGCGT
TGTAGAGGTTCCTAATCAAGCTAAAAGCGGAATGTGTTTAGACACTCATA
TTAATTGTCAAAACAACATTGATTTTCAAATGAAGAGCAAAGATATTTAT
ACCCAGTGCATAATTGATATACCTACTGCGAATGGAAACTCAGTTTCCCC
TGAATCCTATGAAGAGGGAGTTGAAAGTTTTAAAACTGGGAACTCGCCAA
CAAGCGTACTGTGCAGAGAATCAAGTCTAAAAGTAGGGGCAAAACTTATG
CAGAGTTTAGCGAGCTTCAACAATCCAAGAGATAAACCAGTCACTGAAAA
GTTACATGATTTGCCGAGTAACAAATGGAGAAGATATAAGCGCTCTACCT
CATTCGATTCCAGAAAAGTTGCGCTTCTGTTTTCAATATTGTCAAGTTTG
GGCACATTGGTATTGATATATCTGACATTATTGAAAACAGAAGCGCAACT
TTTCCTTTGGCTGTTGAAGCTTTTACCGGTGTCGCATGGCAAGATGCTGG
AAAGGTGGAGCTGGTGGAAGGGCCATCCTACTTTGGATTTTCTCTTCCGT
TCTCGCTAACCACGTTGATATGGATTGAAGTATTAGTAATTGGGTACATT
GAGTTTCAACGGAATGCTGAGCTTGATCCAGAGAAAAGGTTATACCCAGG
TGGAAAATTCTTTGATCCTCTTGGTTTGGCCAATGACCCGGAAGAGAAAG
AAAGACTTCAACTGGCAGAGATTAAGCATTCTCGCTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind

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