GT620750
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620750 vs. TrEMBL
Match: C6TDK5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 5.803e-60 Identity = 115/149 (77.18%), Postives = 129/149 (86.58%), Query Frame = 1 Query: 1 EEAKKENSTSPLAFLSVVEVPNQAKSGMCLDTHINCQNNIDFQMKSKDIYTQCIIDIPTANGNSVSPESYEEGVESFKTGNSPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447 EE + N SPLAFLS++EVPNQ K+ MCLD HINCQN IDFQMK++D+Y+QCI+DIP+ NGNSVSPESYEE VESFKTGNSPTSVL RESS K G KLMQSL + NPRDK V+EKLHDLPSN+WRRYKR+ SFDSRKVALLFSILSS Sbjct: 76 EENENANCASPLAFLSILEVPNQVKNTMCLDAHINCQNCIDFQMKNEDVYSQCIVDIPSVNGNSVSPESYEEAVESFKTGNSPTSVLWRESSFK-GGKLMQSLVNVGNPRDKAVSEKLHDLPSNRWRRYKRAASFDSRKVALLFSILSS 223
BLAST of GT620750 vs. TrEMBL
Match: C6TEG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.521e-57 Identity = 112/149 (75.17%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 1 EEAKKENSTSPLAFLSVVEVPNQAKSGMCLDTHINCQNNIDFQMKSKDIYTQCIIDIPTANGNSVSPESYEEGVESFKTGNSPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447 EE + N SPL FLS++ VPNQ KS MCLD INCQN IDFQMK++ +Y+QCIIDIP+ NGNSVSPESYEE VE FKTGNSPTSVL RESS K G KLMQSL + +NPRDKPV+EKLHDLPSN+WR+YKR+ SFDSRKVALLFSILSS Sbjct: 76 EEDENANCASPLPFLSILGVPNQVKSPMCLDDPINCQNCIDFQMKNEGVYSQCIIDIPSVNGNSVSPESYEEAVEGFKTGNSPTSVLWRESSFKAG-KLMQSLVNVSNPRDKPVSEKLHDLPSNRWRKYKRAASFDSRKVALLFSILSS 223
BLAST of GT620750 vs. TrEMBL
Match: C6TLL3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 5.414e-42 Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 LAVEA TGVAWQDAGKVELVEG SY G LPFSLTTLIWIEV+VIGYIEFQRNAELDPEKRLYPGG+FFDPLGLANDPEEK RLQLAEIKHSR Sbjct: 8 LAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHSR 100
BLAST of GT620750 vs. TrEMBL
Match: B9SLN2_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0593190 PE=4 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 9.557e-39 Identity = 82/93 (88.17%), Postives = 86/93 (92.47%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 LAVEA TGVAWQDAGKVELVEG SY G LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKR+YPGG +FDPLGLA+DPE+KE LQLAEIKHSR Sbjct: 162 LAVEALTGVAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGG-YFDPLGLASDPEKKENLQLAEIKHSR 253
BLAST of GT620750 vs. TrEMBL
Match: A5C288_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010727 PE=4 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.129e-38 Identity = 79/93 (84.95%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 LAVE+ TGV WQDAGKVEL+EG SY G LPFS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLA DPE+K LQLAEIKH+R Sbjct: 153 LAVESLTGVTWQDAGKVELIEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKAVLQLAEIKHAR 245
BLAST of GT620750 vs. TrEMBL
Match: Q6Z411_ORYSJ (Chlorophyll a/b-binding protein OS=Oryza sativa subsp. japonica GN=P0567H04.14 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38 Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R Sbjct: 154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246
BLAST of GT620750 vs. TrEMBL
Match: O65217_ORYSA (Chlorophyll a/b-binding protein OS=Oryza sativa GN=RCABP69 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38 Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R Sbjct: 154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246
BLAST of GT620750 vs. TrEMBL
Match: A3BL40_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24721 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38 Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R Sbjct: 131 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 223
BLAST of GT620750 vs. TrEMBL
Match: A2YML1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26463 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 6.194e-38 Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLA+DPE+KERLQLAEIKH+R Sbjct: 154 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHAR 246
BLAST of GT620750 vs. TrEMBL
Match: B9SQ36_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0644360 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.057e-37 Identity = 78/93 (83.87%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L VE TGV WQDAGKVELVEG SY G LPFS+TTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGKFFDPLGLA DPE+K LQLAEIKH+R Sbjct: 151 LTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHAR 243
BLAST of GT620750 vs. SwissProt
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.916e-37 Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +AVEA TG+AWQDAGKVELVEG SY G LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPE+ + L+LAEIKHSR Sbjct: 156 IAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSR 247
BLAST of GT620750 vs. SwissProt
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.421e-37 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPE+ +LQLAEIKH+R Sbjct: 155 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHAR 247
BLAST of GT620750 vs. SwissProt
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.386e-37 Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 + VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA+DP +K +LQLAEIKH+R Sbjct: 152 ITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHAR 244
BLAST of GT620750 vs. SwissProt
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.655e-24 Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKE-RLQLAEIKHSR 785 L EA TGV+W +AGKVEL +G SY G SLPFS+T LIWIEV+++G EF RN+E +PEKR YPGG FDPL LA++ EE+ RL+ AEIKH+R Sbjct: 152 LVAEATTGVSWVEAGKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHAR 243
BLAST of GT620750 vs. SwissProt
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 3.923e-10 Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +Y G +P+ +L T++ IE L I + E QR E DPEK+ YPGG FDPLG + DP + E L+L EIK+ R Sbjct: 127 TYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGA-FDPLGFSKDPAKFEELKLKEIKNGR 196
BLAST of GT620750 vs. SwissProt
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.491e-9 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +Y G +P+ +L T++ IE L I ++E QR+ E D EK+ YPGG FDPLG + DP + E L++ EIK+ R Sbjct: 128 TYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPAKFEELKVKEIKNGR 197
BLAST of GT620750 vs. SwissProt
Match: CB5_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.811e-8 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 576 SYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +YFG ++P +L + EV+++G E+ R LD E +L+PGG F DPLGLA DPE+ L++ EIK+ R Sbjct: 161 NYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGR 230
BLAST of GT620750 vs. SwissProt
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 3.672e-8 Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 3 Query: 516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785 +A+TG+ W +AG G PFS TL+ ++L++G++E +R + DP+ + YPGGKFFDPL LA D ++ ERL+LAEIKH+R Sbjct: 123 QAWTGIPWFEAGADP--------GAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHAR 236
BLAST of GT620750 vs. SwissProt
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.822e-7 Identity = 39/122 (31.97%), Postives = 60/122 (49.18%), Query Frame = 3 Query: 516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785 +A++G+ W +AG G PFS TL+ +++++G++E +R + DP+ + YPGGKFFDPL LA D E+ ERL++AEIKH+R Sbjct: 118 QAWSGIPWFEAGADP--------GAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHAR 231
BLAST of GT620750 vs. TAIR peptide
Match: AT2G40100.1 (| Symbols: LHCB4.3 | light harvesting complex photosystem II | chr2:16745884-16747190 FORWARD LENGTH=276) HSP 1 Score: 154.836 bits (390), Expect = 4.894e-38 Identity = 75/93 (80.65%), Postives = 84/93 (90.32%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +AVEA TG+AWQDAGKVELVEG SY G LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPE+ + L+LAEIKHSR Sbjct: 156 IAVEALTGIAWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSR 247
BLAST of GT620750 vs. TAIR peptide
Match: AT5G01530.1 (| Symbols: LHCB4.1 | light harvesting complex photosystem II | chr5:209084-210243 FORWARD LENGTH=290) HSP 1 Score: 154.451 bits (389), Expect = 6.391e-38 Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 L+VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPE+ +LQLAEIKH+R Sbjct: 155 LSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHAR 247
BLAST of GT620750 vs. TAIR peptide
Match: AT3G08940.2 (| Symbols: LHCB4.2 | light harvesting complex photosystem II | chr3:2717717-2718665 FORWARD LENGTH=287) HSP 1 Score: 154.066 bits (388), Expect = 8.347e-38 Identity = 74/93 (79.57%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 507 LAVEAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 + VE TGV WQDAGKVELV+G SY G LPFS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA+DP +K +LQLAEIKH+R Sbjct: 152 ITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHAR 244
BLAST of GT620750 vs. TAIR peptide
Match: AT4G39900.1 (| Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:18508569-18510289 REVERSE LENGTH=245) HSP 1 Score: 90.8929 bits (224), Expect = 8.731e-19 Identity = 56/146 (38.36%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 25 TSPLAFLSVVEVPNQAKSGMCLDTHINCQ---NNIDFQMKSKDIYTQCIIDIPTANGNS-VSPESYEEGVESFKTGN-SPTSVLCRESSLKVGAKLMQSLASFNNPRDKPVTEKLHDLPSNKWRRYKRSTSFDSRKVALLFSILSS 447 TS LS V+ +K+ M +D +NCQ N I+ + D Y C++DI GN + S++E V S K+ + VL R++SL DK ++E+ HD P+N+WRRYKR+ SFDSRK+ +LFSILSS Sbjct: 88 TSHFTLLSFVKALLPSKNQMLIDAQLNCQKTQNRINVLLGGTDSYQSCVVDINVEKGNGGETVTSHDEVVASMKSESVHMQKVLQRQASLST---------------DKALSERCHDAPTNRWRRYKRAASFDSRKIVILFSILSS 218
BLAST of GT620750 vs. TAIR peptide
Match: AT3G54890.1 (| Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339706-20340922 REVERSE LENGTH=241) HSP 1 Score: 67.781 bits (164), Expect = 7.867e-12 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +Y G +P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG FDPLG + DP++ E L++ EIK+ R Sbjct: 127 TYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNGR 196
BLAST of GT620750 vs. TAIR peptide
Match: AT3G54890.4 (| Symbols: LHCA1 | photosystem I light harvesting complex gene 1 | chr3:20339881-20340922 REVERSE LENGTH=213) HSP 1 Score: 66.6254 bits (161), Expect = 1.753e-11 Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 576 SYFGFSLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +Y G +P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG FDPLG + DP++ E L++ EIK+ + Sbjct: 127 TYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNGK 196
BLAST of GT620750 vs. TAIR peptide
Match: AT4G10340.1 (| Symbols: LHCB5 | light harvesting complex of photosystem II 5 | chr4:6408200-6409496 FORWARD LENGTH=280) HSP 1 Score: 59.3066 bits (142), Expect = 2.798e-9 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 576 SYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLANDPEEKERLQLAEIKHSR 785 +YFG ++P +L + EV+++G E+ R LD E +L+PGG F DPLGLA DPE+ L++ EIK+ R Sbjct: 161 NYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGR 230
BLAST of GT620750 vs. TAIR peptide
Match: AT1G15820.1 (| Symbols: LHCB6, CP24 | light harvesting complex photosystem II subunit 6 | chr1:5446685-5447676 REVERSE LENGTH=258) HSP 1 Score: 56.6102 bits (135), Expect = 1.814e-8 Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 3 Query: 516 EAFTGVAWQDAGKVELVEGPSYFGFSLPFSLTTLIWIEVLVIGYIEFQRNAEL-DPEKRL----------------------YPGGKFFDPLGLAN---------DPEEKERLQLAEIKHSR 785 +A++GVAW +AG P PFS +L+ ++L++G++E +R + +P+ + YPGG+FFDPLGLA D E+ ERL+LAEIKHSR Sbjct: 120 QAWSGVAWFEAGAQ-----PDAIA---PFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSR 233 The following BLAST results are available for this feature:
BLAST of GT620750 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620750 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 9
BLAST of GT620750 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 8
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620750 ID=GT620750; Name=GT620750; organism=Lens culinaris; type=EST; length=787bpback to top |